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Showing all 19 items for (author: rutten & t)

EMDB-29454:
Structure of Covid Spike variant deltaN135 in fully closed form
Method: single particle / : Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs J, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

EMDB-29455:
Structure of Covid Spike variant deltaN135 with one erect RBD
Method: single particle / : Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs J, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

EMDB-29456:
Structure of Covid Spike variant deltaN25 with one erect RBD
Method: single particle / : Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs J, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

PDB-8fu7:
Structure of Covid Spike variant deltaN135 in fully closed form
Method: single particle / : Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs J, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

PDB-8fu8:
Structure of Covid Spike variant deltaN135 with one erect RBD
Method: single particle / : Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs J, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

PDB-8fu9:
Structure of Covid Spike variant deltaN25 with one erect RBD
Method: single particle / : Yu X, Juraszek J, Rutten L, Bakkers MJG, Blokland S, Van den Broek NJF, Verwilligen AYW, Abeywickrema P, Vingerhoets J, Neefs J, Bakhash SAM, Roychoudhury P, Greninger A, Sharma S, Langedijk JPM

EMDB-23480:
Cryo-EM structure of llama J3 VHH antibody in complex with HIV-1 Env BG505 DS-SOSIP.664
Method: single particle / : Gorman J, Kwong PD

PDB-7lpn:
Cryo-EM structure of llama J3 VHH antibody in complex with HIV-1 Env BG505 DS-SOSIP.664
Method: single particle / : Gorman J, Kwong PD

EMDB-11639:
Cryo-EM structure of a prefusion stabilized SARS-CoV-2 Spike (D614N, R682S, R685G, A892P, A942P and V987P)(S-closed trimer)
Method: single particle / : Renault LLR, Rutten L, Juraszek J, Langedijk JPM

EMDB-11719:
Cryo-EM structure of a prefusion stabilized SARS-CoV-2 Spike (D614N, R682S, R685G, A892P, A942P and V987P)(One up trimer)
Method: single particle / : Renault LLR, Rutten L, Juraszek J, Langedijk JPM

PDB-7a4n:
Cryo-EM structure of a prefusion stabilized SARS-CoV-2 Spike (D614N, R682S, R685G, A892P, A942P and V987P)(S-closed trimer)
Method: single particle / : Rutten L, Renault LLR, Juraszek J, Langedijk JPM

PDB-7ad1:
Cryo-EM structure of a prefusion stabilized SARS-CoV-2 Spike (D614N, R682S, R685G, A892P, A942P and V987P)(One up trimer)
Method: single particle / : Rutten L, Renault LLR, Juraszek J, Langedijk JPM

EMDB-1015:
Cryo-electron microscopy reveals the functional organization of an enveloped virus, Semliki Forest virus.
Method: single particle / : Mancini EJ, Clarke M, Gowen B, Rutten T, Fuller SD

EMDB-1013:
Combined EM/X-ray imaging yields a quasi-atomic model of the adenovirus-related bacteriophage PRD1 and shows key capsid and membrane interactions.
Method: single particle / : San Martin C, Burnett RM, de Haas F, Heinkel R, Rutten T, Fuller SD, Butcher SJ, Bamford DH

EMDB-1014:
Combined EM/X-ray imaging yields a quasi-atomic model of the adenovirus-related bacteriophage PRD1 and shows key capsid and membrane interactions.
Method: single particle / : San Martin C, Burnett RM, de Haas F, Heinkel R, Rutten T, Fuller SD, Butcher SJ, Bamford DH

PDB-1hb5:
quasi-atomic resolution model of bacteriophage PRD1 P3-shell, obtained by combined cryo-EM and X-ray crystallography.
Method: single particle / : San Martin C, Burnett RM, De Haas F, Heinkel R, Rutten T, Fuller SD, Butcher SJ, Bamford DH

PDB-1hb7:
quasi-atomic resolution model of bacteriophage PRD1 sus1 mutant, obtained by combined cryo-EM and X-ray crystallography.
Method: single particle / : San Martin C, Burnett RM, De Haas F, Heinkel R, Rutten T, Fuller SD, Butcher SJ, Bamford DH

PDB-1hb9:
quasi-atomic resolution model of bacteriophage PRD1 wild type virion, obtained by combined cryo-EM and X-ray crystallography.
Method: single particle / : San Martin C, Burnett RM, De Haas F, Heinkel R, Rutten T, Fuller SD, Butcher SJ, Bamford DH

PDB-1dyl:
9 ANGSTROM RESOLUTION CRYO-EM RECONSTRUCTION STRUCTURE OF SEMLIKI FOREST VIRUS (SFV) AND FITTING OF THE CAPSID PROTEIN STRUCTURE IN THE EM DENSITY
Method: single particle / : Mancini EJ, Clarke M, Gowen BE, Rutten T, Fuller SD

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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