[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 294 items for (author: myasnikov & a)

EMDB-19436:
Cryo-EM structure of mouse heavy-chain apoferritin
Method: single particle / : Nazarov S, Myasnikov A, Stahlberg H

PDB-8rqb:
Cryo-EM structure of mouse heavy-chain apoferritin
Method: single particle / : Nazarov S, Myasnikov A, Stahlberg H

EMDB-16563:
80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16591:
80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16594:
Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16609:
Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16616:
Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16634:
Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16648:
Non-rotated 80S S. cerevisiae ribosome with ligands
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16684:
Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16702:
Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16729:
Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8ccs:
80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cdl:
80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cdr:
Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8ceh:
Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cf5:
Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cg8:
Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cgn:
Non-rotated 80S S. cerevisiae ribosome with ligands
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8civ:
Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cku:
Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

PDB-8cmj:
Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin
Method: single particle / : Milicevic N, Jenner L, Myasnikov A, Yusupov M, Yusupova G

EMDB-16520:
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Wilson DN

EMDB-16620:
Eravacycline bound to the 30S head
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

EMDB-16652:
Tiamulin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

PDB-8ca7:
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Wilson DN

PDB-8cf8:
Eravacycline bound to the 30S head
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

PDB-8cgv:
Tiamulin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16526:
Streptomycin and Hygromycin B bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16530:
Evernimicin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16536:
empty 30S head
Method: single particle / : Paternoga H, Beckert B, Wilson DN

EMDB-16613:
Retapamulin and Capreomycin bound to the 50S subunit
Method: single particle / : Paternoga H, Beckert B, Wilson DN

EMDB-16615:
Tetracycline bound to the 30S head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

EMDB-16641:
Clindamycin bound to the 50S subunit
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

EMDB-16644:
Pentacycline TP038 bound to the 30S head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16645:
Streptomycin bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

EMDB-16650:
Apramycin bound to the 30S body
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

EMDB-16651:
Gentamicin bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

PDB-8cai:
Streptomycin and Hygromycin B bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

PDB-8cam:
Evernimicin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

PDB-8caz:
empty 30S head
Method: single particle / : Paternoga H, Beckert B, Wilson DN

PDB-8ceu:
Retapamulin and Capreomycin bound to the 50S subunit
Method: single particle / : Paternoga H, Beckert B, Wilson DN

PDB-8cf1:
Tetracycline bound to the 30S head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

PDB-8cgd:
Clindamycin bound to the 50S subunit
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

PDB-8cgi:
Pentacycline TP038 bound to the 30S head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

PDB-8cgj:
Streptomycin bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

PDB-8cgr:
Apramycin bound to the 30S body
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

PDB-8cgu:
Gentamicin bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16612:
Kasugamycin bound to the 30S body
Method: single particle / : Paternoga H, Beckert B, Wilson DN

EMDB-16646:
Lincomycin and Avilamycin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more