[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 52 items for (author: johnson & nj)

EMDB-42987:
Structure of the Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 1D10 and 4C06
Method: single particle / : Johnson NJ, Ramamohan AR, McLellan JS

EMDB-42478:
Trehalose Synthase (TreS) of Mycobacterium tuberculosis in complex with 6-TreAz compound
Method: single particle / : Pathirage R, Ronning DR

PDB-8uqv:
Trehalose Synthase (TreS) of Mycobacterium tuberculosis in complex with 6-TreAz compound
Method: single particle / : Pathirage R, Ronning DR

EMDB-41174:
ssRNA bound SAMHD1 T closed
Method: single particle / : Sung M, Huynh K, Han S

PDB-8tdv:
ssRNA bound SAMHD1 T closed
Method: single particle / : Sung M, Huynh K, Han S

EMDB-41175:
ssRNA bound SAMHD1 T open
Method: single particle / : Sung M, Huynh K, Han S

PDB-8tdw:
ssRNA bound SAMHD1 T open
Method: single particle / : Sung M, Huynh K, Han S

EMDB-28758:
Calcitonin Receptor in complex with Gs and Pramlintide analogue peptide San45
Method: single particle / : Cao J, Sexton PM, Wootten DL, Belousoff MJ

EMDB-28759:
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385
Method: single particle / : Cao J, Sexton PM, Wootten DL

EMDB-28810:
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385 (Cluster 5 conformation)
Method: single particle / : Cao J, Sexton PM, Wootten DL, Radostin D

EMDB-28812:
Amylin 3 Receptor in complex with Gs and Pramlintide analogue peptide San45
Method: single particle / : Cao J, Sexton PM, Wootten DL, Belousoff MJ

PDB-8f0j:
Calcitonin Receptor in complex with Gs and Pramlintide analogue peptide San45
Method: single particle / : Cao J, Sexton PM, Wootten DL, Belousoff MJ

PDB-8f0k:
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385
Method: single particle / : Cao J, Sexton PM, Wootten DL

PDB-8f2a:
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385 (Cluster 5 conformation)
Method: single particle / : Cao J, Sexton PM, Wootten DL, Radostin D

PDB-8f2b:
Amylin 3 Receptor in complex with Gs and Pramlintide analogue peptide San45
Method: single particle / : Cao J, Sexton PM, Wootten DL, Belousoff MJ

EMDB-29930:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor CT1
Method: single particle / : Schenk A, Deniston C, Noeske J

PDB-8gcc:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor CT1
Method: single particle / : Schenk A, Deniston C, Noeske J

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-7uhb:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-7uhc:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-25574:
SARS-CoV-2 S-RBD + Fab 54042-4
Method: single particle / : Johnson NV, Mclellan JS

PDB-7t01:
SARS-CoV-2 S-RBD + Fab 54042-4
Method: single particle / : Johnson NV, Mclellan JS

EMDB-26180:
Calcitonin Receptor in complex with Gs and rat amylin peptide, CT-like state
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26188:
Calcitonin Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26197:
Human Amylin2 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyi:
Calcitonin Receptor in complex with Gs and rat amylin peptide, CT-like state
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyn:
Calcitonin Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyx:
Human Amylin2 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26178:
Human Amylin1 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26179:
Human Amylin2 Receptor in complex with Gs and human calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26184:
Calcitonin Receptor in complex with Gs and rat amylin peptide, bypass motif
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26190:
Calcitonin receptor in complex with Gs and human calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26196:
Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26199:
Human Amylin2 Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26208:
Human Amylin3 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyf:
Human Amylin1 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyh:
Human Amylin2 Receptor in complex with Gs and human calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyl:
Calcitonin Receptor in complex with Gs and rat amylin peptide, bypass motif
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyo:
Calcitonin receptor in complex with Gs and human calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyw:
Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tyy:
Human Amylin2 Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

PDB-7tzf:
Human Amylin3 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-22829:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

PDB-7kdt:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

EMDB-6075:
Reconstruction of the N-terminal domain of C. elegans TFG
Method: single particle / : Johnson A, Bhattacharya N, Hanna M, Schuh AL, Pennington JG, Otegui MS, Stagg SM, Audhya A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more