[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 34 items for (author: joanne & l & tan)

EMDB-29458:
Alzheimer's disease paired-helical filament in complex with PET tracer GTP-1
Method: helical / : Merz GE, Tse E, Southworth DR

PDB-8fug:
Alzheimer's disease paired-helical filament in complex with PET tracer GTP-1
Method: helical / : Merz GE, Tse E, Southworth DR

EMDB-30883:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)
Method: single particle / : Fibriansah G, Ng TS

EMDB-30884:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)
Method: single particle / : Fibriansah G, Ng TS

EMDB-30885:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 37 deg C
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

EMDB-30886:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 40 deg C
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

PDB-7dwt:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

PDB-7dwu:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

EMDB-30278:
Helical reconstruction of Dengue virus serotype 3 complexed with Fab C10
Method: helical / : Morrone S, Chew SV

EMDB-30279:
Helical reconstruction of Zika virus complexed with Fab C10
Method: helical / : Morrone S, Chew SV

PDB-7c2s:
Helical reconstruction of Dengue virus serotype 3 complexed with Fab C10
Method: helical / : Morrone S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Zhang S, Lok SM

PDB-7c2t:
Helical reconstruction of Zika virus complexed with Fab C10
Method: helical / : Morrone S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Zhang S, Lok SM

EMDB-2967:
Cryo-EM structure of Dengue virus serotype 2 in complex with antigen-binding fragments of human antibody 2D22
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

EMDB-2968:
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation.
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

EMDB-2969:
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to virus that was pre-incubated at 37 degree C.
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

EMDB-2996:
Cryo-EM structure of Dengue virus serotype 2 strain PVP94/07 complexed with human antibody 2D22 Fab at 37 degrees C
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

EMDB-2997:
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 4 degrees C
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

EMDB-2998:
Cryo-EM structure of the unexpanded particles of Dengue virus serotype 2 strain New Guinea-C in complex with human antibody 2D22 Fab at 37 degrees C. The Fab molecules were added to the virus that had been pre-incubated at 37 degrees C.
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

EMDB-2999:
Cryo-EM structure of the unexpanded particles of Dengue virus serotype 2 strain New Guinea-C in complex with human antibody 2D22 Fab at 37 degrees C. The Fab molecules were added to the virus before 37 degrees C incubation.
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

PDB-4uif:
Cryo-EM structure of Dengue virus serotype 2 in complex with antigen-binding fragments of human antibody 2D22
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe Junior JE, Lok SM

PDB-4uih:
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation.
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM

PDB-5a1z:
Cryo-EM structure of Dengue virus serotype 2 strain PVP94-07 complexed with human antibody 2D22 Fab at 37 degrees C
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe Jr JE, Lok SM

EMDB-5933:
Cryo-EM structure of Dengue serotype 3 virus at 28 degrees C
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM

EMDB-5934:
Cryo-EM structure of Dengue serotype 3 virus at 37 degrees C
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM

EMDB-5935:
Cryo-EM structure of Dengue virus serotype 3 in complex with human antibody 5J7 Fab
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM

PDB-3j6s:
Cryo-EM structure of Dengue virus serotype 3 at 28 degrees C
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM

PDB-3j6t:
Cryo-EM structure of Dengue virus serotype 3 at 37 degrees C
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM

PDB-3j6u:
Cryo-EM structure of Dengue virus serotype 3 in complex with human antibody 5J7 Fab
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM

EMDB-2442:
Cryo-EM structure of Dengue virus serotype 1 complexed with Fab fragments of human antibody 1F4
Method: single particle / : Fibriansah G, Tan JL, de Alwis R, Smith SA, Ng TS, Kostyuchenko VA, Ibarra KD, Harris E, de Silva A, Crowe JE, Lok SM

PDB-4c2i:
Cryo-EM structure of Dengue virus serotype 1 complexed with Fab fragments of human antibody 1F4
Method: single particle / : Fibriansah G, Tan JL, de Alwis R, Smith SA, Ng TS, Kostyuchenko VA, Ibarra KD, Harris E, de Silva A, Crowe Junior JE, Lok SM

PDB-4cct:
Dengue 1 cryo-EM reconstruction
Method: single particle / : Kostyuchenko VA, Zhang Q, Tan JL, Ng TS, Lok SM

EMDB-2141:
6A Electron cryomicroscopy structure of immature Dengue virus serotype 1
Method: single particle / : Kostyuchenko VA, Zhang Q, Tan LC, Ng TS, Lok SM

EMDB-2142:
4.5A Electron cryomicroscopy reconstruction of mature Dengue virus serotype 1
Method: single particle / : Kostyuchenko VA, Zhang Q, Tan LC, Ng TS, Lok SM

PDB-4b03:
6A Electron cryomicroscopy structure of immature Dengue virus serotype 1
Method: single particle / : Kostyuchenko VA, Zhang Q, Tan LC, Ng TS, Lok SM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more