[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 60 items for (author: geller & j)

EMDB-17576:
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

EMDB-17578:
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

PDB-8p99:
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

PDB-8p9y:
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

EMDB-29207:
CryoET tomogram of mitochondria in BACHD mouse model neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29208:
CryoET tomogram of BACHD mouse model neuron showing sheet aggregates
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29210:
CryoET tomogram of purified mitochondria from HD patient iPSC-derived neuron (Q109)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29211:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with PIAS1 hetKO treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28668:
CryoET tomogram of iPSC-derived control non-HD neuron (Q18)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28944:
CryoET tomogram of iPSC-derived control non-HD neuron (Q20)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28946:
CryoET tomogram of HD patient iPSC-derived neuron (Q53)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29074:
CryoET tomogram of HD patient iPSC-derived neuron (Q66)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29075:
CryoET tomogram of HD patient iPSC-derived neuron (Q77)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29076:
CryoET tomogram of HD patient iPSC-derived neuron (Q109)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29079:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) showing sheet aggregate
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29080:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with PIAS1 hetKO treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29081:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with GRSF1 KD treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29083:
CryoET tomogram of mitochondria in WT mouse neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29084:
CryoET tomogram of mitochondria in BACHD-dN17 mouse model neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-25110:
CryoEM map of DNA-PK complex VIb with AMPPNP
Method: single particle / : Chen X, Liu L, Li J, Yang W, Gellert M

EMDB-25111:
CryoEM map of DNA-PK complex VIIb with AMPPNP
Method: single particle / : Chen X, Liu L, Li J, Yang W, Gellert M

EMDB-25112:
CryoEM map of DNA-PK complex VIIa with AMPPNP
Method: single particle / : Chen X, Liu L, Li J, Yang W, Gellert M

EMDB-25113:
DNA-PK complex of DNA end processing
Method: single particle / : Liu L, Li J, Chen X, Yang W, Gellert M

EMDB-25114:
FATKIN domain of the phosphorylated DNA-PKcs
Method: single particle / : Liu L, Li J, Chen X, Yang W, Gellert M

EMDB-25115:
KU, Artemis, DNA and DNA-PKcs_Nheat in the NHEJ DNA end processing complex
Method: single particle / : Liu L, Li J, Chen X, Yang W, Gellert M

EMDB-25439:
CryoEM structure of DNA-PK complex VII
Method: single particle / : Chen X, Liu L, Gellert M, Yang W

EMDB-25440:
CryoEM structure of DNA-PK complex VIII
Method: single particle / : Chen X, Liu L, Gellert M, Yang W

PDB-7sgl:
DNA-PK complex of DNA end processing
Method: single particle / : Liu L, Li J, Chen X, Yang W, Gellert M

PDB-7su3:
CryoEM structure of DNA-PK complex VII
Method: single particle / : Chen X, Liu L, Gellert M, Yang W

PDB-7sud:
CryoEM structure of DNA-PK complex VIII
Method: single particle / : Chen X, Liu L, Gellert M, Yang W

EMDB-22618:
Cryo-EM structure of activated-form DNA-PK (complex VI)
Method: single particle / : Chen X, Gellert M

EMDB-22619:
CryoEM structure of activated-form FATKIN domain of DNA-PK
Method: single particle / : Chen X, Gellert M

EMDB-22620:
CryoEM structure of inactivated-form FATKIN domain of DNA-PK
Method: single particle / : Chen X, Gellert M

EMDB-22622:
CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex I)
Method: single particle / : Chen X, Gellert M

EMDB-22623:
CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex II)
Method: single particle / : Chen X, Gellert M

EMDB-22624:
CryoEM structure of inactivated-form DNA-PK (Complex III)
Method: single particle / : Chen X, Gellert M

EMDB-22625:
CryoEM structure of inactivated-form DNA-PK (Complex IV)
Method: single particle / : Chen X, Gellert M

EMDB-22626:
CryoEM structure of inactivated-form DNA-PK (Complex V)
Method: single particle / : Chen X, Gellert M

PDB-7k0y:
Cryo-EM structure of activated-form DNA-PK (complex VI)
Method: single particle / : Chen X, Gellert M, Yang W

PDB-7k10:
CryoEM structure of activated-form FATKIN domain of DNA-PK
Method: single particle / : Chen X, Gellert M, Yang W

PDB-7k11:
CryoEM structure of inactivated-form FATKIN domain of DNA-PK
Method: single particle / : Chen X, Gellert M, Yang W

PDB-7k19:
CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex I)
Method: single particle / : Chen X, Gellert M, Yang W

PDB-7k1b:
CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex II)
Method: single particle / : Chen X, Gellert M, Yang W

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more