Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1EJ0
DownloadVisualize
BU of 1ej0 by Molmil
FTSJ RNA METHYLTRANSFERASE COMPLEXED WITH S-ADENOSYLMETHIONINE, MERCURY DERIVATIVE
Descriptor: FTSJ, MERCURY (II) ION, S-ADENOSYLMETHIONINE
Authors:Bugl, H, Fauman, E.B, Staker, B.L, Zheng, F, Kushner, S.R, Saper, M.A, Bardwell, J.C.A, Jakob, U.
Deposit date:2000-02-29
Release date:2000-08-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:RNA methylation under heat shock control.
Mol.Cell, 6, 2000
1E69
DownloadVisualize
BU of 1e69 by Molmil
SMC head domain from Thermotoga maritima
Descriptor: CHROMOSOME SEGREGATION SMC PROTEIN
Authors:Lowe, J, Cordell, S.C, van den Ent, F.
Deposit date:2000-08-09
Release date:2000-08-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Smc Head Domain: An Abc ATPase with 900 Residues Antiparallel Coiled-Coil Inserted
J.Mol.Biol., 306, 2001
1E4P
DownloadVisualize
BU of 1e4p by Molmil
Structure of the ribozyme substrate hairpin of Neurospora VS RNA. A close look at the cleavage site
Descriptor: RNA (5'-R(*GP*UP*GP*CP*GP*AP*AP*GP*AP*CP*GP*AP*AP* AP*GP*UP*CP*CP*GP*AP*GP*CP*GP*C)-3')
Authors:Michiels, P.J.A, Schouten, C.H.J, Heus, H.A, Hilbers, C.W.
Deposit date:2000-07-12
Release date:2001-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Ribozyme Substrate Hairpin of Neurospora Vs RNA: A Close Look at the Cleavage Site
RNA, 6, 2000
8ANR
DownloadVisualize
BU of 8anr by Molmil
Fucosylated alternate chirality linear peptide FHP30 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.6 Angstrom resolution.
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ...
Authors:Personne, H, Stocker, A, Reymond, J.-L.
Deposit date:2022-08-05
Release date:2023-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide.
J.Med.Chem., 66, 2023
1EJA
DownloadVisualize
BU of 1eja by Molmil
STRUCTURE OF PORCINE TRYPSIN COMPLEXED WITH BDELLASTASIN, AN ANTISTASIN-TYPE INHIBITOR
Descriptor: BDELLASTASIN, SODIUM ION, TRYPSIN
Authors:Rester, U, Moser, M, Huber, R, Bode, W.
Deposit date:2000-03-02
Release date:2001-03-02
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:L-Isoaspartate 115 of porcine beta-trypsin promotes crystallization of its complex with bdellastasin.
Acta Crystallogr.,Sect.D, 56, 2000
1EBH
DownloadVisualize
BU of 1ebh by Molmil
OCTAHEDRAL COORDINATION AT THE HIGH AFFINITY METAL SITE IN ENOLASE; CRYSTALLOGRAPHIC ANALYSIS OF THE MG++-ENZYME FROM YEAST AT 1.9 ANGSTROMS RESOLUTION
Descriptor: CHLORIDE ION, ENOLASE, MAGNESIUM ION
Authors:Wedekind, J.E, Reed, G.H, Rayment, I.
Deposit date:1994-11-01
Release date:1995-04-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Octahedral coordination at the high-affinity metal site in enolase: crystallographic analysis of the MgII--enzyme complex from yeast at 1.9 A resolution.
Biochemistry, 34, 1995
1EDH
DownloadVisualize
BU of 1edh by Molmil
E-CADHERIN DOMAINS 1 AND 2 IN COMPLEX WITH CALCIUM
Descriptor: CALCIUM ION, E-CADHERIN, MERCURY (II) ION
Authors:Nagar, B, Overduin, M, Ikura, M, Rini, J.M.
Deposit date:1996-05-15
Release date:1997-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of calcium-induced E-cadherin rigidification and dimerization.
Nature, 380, 1996
8AOO
DownloadVisualize
BU of 8aoo by Molmil
Fucosylated mixed-chirality linear peptide FHP31 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.2 Angstrom resolution.
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ...
Authors:Personne, H, Stocker, A, Reymond, J.-L.
Deposit date:2022-08-08
Release date:2023-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide.
J.Med.Chem., 66, 2023
1EJH
DownloadVisualize
BU of 1ejh by Molmil
EIF4E/EIF4G PEPTIDE/7-METHYL-GDP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, EUKARYOTIC INITIATION FACTOR 4E, EUKARYOTIC INITIATION FACTOR 4GII
Authors:Marcotrigiano, J, Gingras, A.-C, Sonenberg, N, Burley, S.K.
Deposit date:2000-03-02
Release date:2000-03-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cap-dependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G.
Mol.Cell, 3, 1999
1EDZ
DownloadVisualize
BU of 1edz by Molmil
STRUCTURE OF THE NAD-DEPENDENT 5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE
Descriptor: 5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE
Authors:Monzingo, A.F, Breksa, A, Ernst, S, Appling, D.R, Robertus, J.D.
Deposit date:2000-01-28
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The X-ray structure of the NAD-dependent 5,10-methylenetetrahydrofolate dehydrogenase from Saccharomyces cerevisiae.
Protein Sci., 9, 2000
1EEI
DownloadVisualize
BU of 1eei by Molmil
CHOLERA TOXIN B-PENTAMER COMPLEXED WITH METANITROPHENYL-ALPHA-D-GALACTOSE
Descriptor: 3-nitrophenyl alpha-D-galactopyranoside, PROTEIN (CHOLERA TOXIN B)
Authors:Merritt, E.A, Hol, W.G.J.
Deposit date:2000-01-31
Release date:2000-02-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploration of the GM1 receptor-binding site of heat-labile enterotoxin and cholera toxin by phenyl-ring-containing galactose derivatives.
Acta Crystallogr.,Sect.D, 57, 2001
8AN9
DownloadVisualize
BU of 8an9 by Molmil
Fucosylated mixed-chirality linear peptide FHP5 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.3 Angstrom resolution.
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ...
Authors:Personne, H, Stocker, A, Reymond, J.-L.
Deposit date:2022-08-04
Release date:2023-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.273 Å)
Cite:To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide.
J.Med.Chem., 66, 2023
1EJX
DownloadVisualize
BU of 1ejx by Molmil
CRYSTAL STRUCTURE OF WILD-TYPE KLEBSIELLA AEROGENES UREASE AT 100K
Descriptor: NICKEL (II) ION, UREASE ALPHA SUBUNIT, UREASE BETA SUBUNIT, ...
Authors:Pearson, M.A, Karplus, P.A.
Deposit date:2000-03-04
Release date:2003-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Wild-type Klebsiella aerogenes Urease at 100K
To be published
4N9X
DownloadVisualize
BU of 4n9x by Molmil
Crystal Structure of the OCTAPRENYL-METHYL-METHOXY-BENZQ MOLECULE from Erwina carotovora subsp. atroseptica strain SCRI 1043 / ATCC BAA-672, Northeast Structural Genomics Consortium (NESG) Target EwR161
Descriptor: Putative monooxygenase
Authors:Kuzin, A, Chen, Y, Lew, S, Seetharaman, J, Mao, L, Xiao, R, Owens, L.A, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-10-21
Release date:2013-11-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Crystal Structure of the OCTAPRENYL-METHYL-METHOXY-BENZQ MOLECULE from Erwina carotovora subsp. atroseptica strain SCRI 1043 / ATCC BAA-672, Northeast Structural Genomics Consortium (NESG) Target EwR161
To be Published
4NA8
DownloadVisualize
BU of 4na8 by Molmil
Factor XIa in complex with the inhibitor 5-aminocarbonyl-2-[3-[(2s,4r)-6-carbamimidoyl-4-methyl-4-phenyl-2,3-dihydro-1h-quinolin-2-yl]phenyl]benzoic acid
Descriptor: 1,2-ETHANEDIOL, 5-aminocarbonyl-2-[3-[(2S,4R)-6-carbamimidoyl-4-methyl-4-phenyl-2,3-dihydro-1H-quinolin-2-yl]phenyl]benzoic acid, Coagulation factor XI, ...
Authors:Wei, A.
Deposit date:2013-10-21
Release date:2014-02-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Tetrahydroquinoline Derivatives as Potent and Selective Factor XIa Inhibitors.
J.Med.Chem., 57, 2014
4NAH
DownloadVisualize
BU of 4nah by Molmil
Inhibitors of 4-Phosphopanthetheine Adenylyltransferase (PPAT)
Descriptor: 2-[(2-{(1S,2S)-2-[(3,4-dichlorobenzyl)carbamoyl]cyclohexyl}-6-ethylpyrimidin-4-yl)sulfanyl]-1H-imidazole-5-carboxylic acid, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Phosphopantetheine adenylyltransferase
Authors:Lahiri, S.D.
Deposit date:2013-10-22
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Discovery of inhibitors of 4'-phosphopantetheine adenylyltransferase (PPAT) to validate PPAT as a target for antibacterial therapy.
Antimicrob.Agents Chemother., 57, 2013
3W3M
DownloadVisualize
BU of 3w3m by Molmil
Crystal structure of human TLR8 in complex with Resiquimod (R848) crystal form 2
Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, ...
Authors:Tanji, H, Ohto, U, Shimizu, T.
Deposit date:2012-12-22
Release date:2013-04-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural reorganization of the Toll-like receptor 8 dimer induced by agonistic ligands
Science, 339, 2013
3W41
DownloadVisualize
BU of 3w41 by Molmil
Crystal structure of RsbX in complex with magnesium in space group P21
Descriptor: MAGNESIUM ION, Phosphoserine phosphatase RsbX
Authors:Teh, A.H, Makino, M, Baba, S, Shimizu, N, Yamamoto, M, Kumasaka, T.
Deposit date:2013-01-04
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure of the RsbX phosphatase involved in the general stress response of Bacillus subtilis
Acta Crystallogr.,Sect.D, 71, 2015
4HO2
DownloadVisualize
BU of 4ho2 by Molmil
Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine
Descriptor: Glucose-1-phosphate thymidylyltransferase, SULFATE ION, THYMIDINE
Authors:Chen, T.J, Chien, W.T, Lin, C.C, Wang, W.C.
Deposit date:2012-10-22
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine
TO BE PUBLISHED
3W42
DownloadVisualize
BU of 3w42 by Molmil
Crystal structure of RsbX in complex with manganese in space group P1
Descriptor: MANGANESE (II) ION, Phosphoserine phosphatase RsbX
Authors:Teh, A.H, Makino, M, Baba, S, Shimizu, N, Yamamoto, M, Kumasaka, T.
Deposit date:2013-01-04
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Structure of the RsbX phosphatase involved in the general stress response of Bacillus subtilis
Acta Crystallogr.,Sect.D, 71, 2015
4N2B
DownloadVisualize
BU of 4n2b by Molmil
Crystal structure of Protein Arginine Deiminase 2 (10 mM Ca2+)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Protein-arginine deiminase type-2
Authors:Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R.
Deposit date:2013-10-04
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design.
Acs Chem.Biol., 10, 2015
4HJB
DownloadVisualize
BU of 4hjb by Molmil
GCN4pLI derivative with alpha/beta/cyclic-gamma amino acid substitution pattern
Descriptor: GCN4pLI(alpha/beta/cyclic-gamma)
Authors:Shin, Y.H, Mortenson, D.E, Satyshur, K.A, Forest, K.T, Gellman, S.H.
Deposit date:2012-10-12
Release date:2013-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Differential Impact of beta and gamma Residue Preorganization on alpha / beta / gamma-Peptide Helix Stability in Water.
J.Am.Chem.Soc., 135, 2013
4NA7
DownloadVisualize
BU of 4na7 by Molmil
Factor XIA in complex with the inhibitor 3'-[(2S,4R)-6-carbamimidoyl-4-methyl-4-phenyl-1,2,3,4-tetrahydroquinolin-2-yl]-4-carbamoyl-5'-[(3-methylbutanoyl)amino]biphenyl-2-carboxylic acid
Descriptor: 3'-[(2S,4R)-6-carbamimidoyl-4-methyl-4-phenyl-1,2,3,4-tetrahydroquinolin-2-yl]-4-carbamoyl-5'-[(3-methylbutanoyl)amino]biphenyl-2-carboxylic acid, Coagulation factor XI, SULFATE ION
Authors:Wei, A.
Deposit date:2013-10-21
Release date:2014-02-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Tetrahydroquinoline Derivatives as Potent and Selective Factor XIa Inhibitors.
J.Med.Chem., 57, 2014
3WEZ
DownloadVisualize
BU of 3wez by Molmil
Crystal structure of human beta-galactosidase in complex with NOEV
Descriptor: (1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, H, Ohto, U, Shimizu, T.
Deposit date:2013-07-16
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural basis of pharmacological chaperoning for human beta-galactosidase
to be published
4MNI
DownloadVisualize
BU of 4mni by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_4736), Target EFI-510156, with bound benzoyl formate, space group P6522
Descriptor: BENZOYL-FORMIC ACID, TRAP dicarboxylate transporter-DctP subunit
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Zhao, S, Stead, M, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-09-10
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon