Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VET
DownloadVisualize
BU of 1vet by Molmil
Crystal Structure of p14/MP1 at 1.9 A resolution
Descriptor: Late endosomal/lysosomal Mp1 interacting protein, Mitogen-activated protein kinase kinase 1 interacting protein 1
Authors:Kurzbauer, R, Teis, D, Maurer-Stroh, S, Eisenhaber, F, Hekman, M, Bourenkov, G.P, Bartunik, H.D, Huber, L.A, Clausen, T.
Deposit date:2004-04-05
Release date:2004-08-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the p14/MP1 scaffolding complex: How a twin couple attaches mitogen- activated protein kinase signaling to late endosomes
Proc.Natl.Acad.Sci.USA, 101, 2004
7VPW
DownloadVisualize
BU of 7vpw by Molmil
Crystal structure of Transportin-1 in complex with BAP1 PY-NLS (residues 706-724)
Descriptor: BRCA1-associated protein 1 (BAP1), Transportin-1
Authors:Yang, T.J, Hsu, S.T.D.
Deposit date:2021-10-18
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.76 Å)
Cite:Tumor suppressor BAP1 nuclear import is governed by transportin-1.
J.Cell Biol., 221, 2022
2BQ3
DownloadVisualize
BU of 2bq3 by Molmil
DNA Adduct Bypass Polymerization by Sulfolobus solfataricus Dpo4. Analysis and Crystal Structures of Multiple Base-Pair Substitution and Frameshift Products with the Adduct 1,N2-Ethenoguanine
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*A)-3', 5'-D(*TP*CP*AP*TP*GNEP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', CALCIUM ION, ...
Authors:Irimia, A, Loukachevitch, L.V, Egli, M.
Deposit date:2005-04-27
Release date:2005-06-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA Adduct Bypass Polymerization by Sulfolobus Solfataricus DNA Polymerase Dpo4: Analysis and Crystal Structures of Multiple Base Pair Substitution and Frameshift Products with the Adduct 1,N2-Ethenoguanine.
J.Biol.Chem., 280, 2005
6H55
DownloadVisualize
BU of 6h55 by Molmil
core of the human pyruvate dehydrogenase (E2)
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
Authors:Haselbach, D, Prajapati, S, Tittmann, K, Stark, H.
Deposit date:2018-07-23
Release date:2019-06-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structural and Functional Analyses of the Human PDH Complex Suggest a "Division-of-Labor" Mechanism by Local E1 and E3 Clusters.
Structure, 27, 2019
2BJ9
DownloadVisualize
BU of 2bj9 by Molmil
NIKR with bound NICKEL and phosphate
Descriptor: NICKEL (II) ION, NICKEL RESPONSIVE REGULATOR, PHOSPHATE ION, ...
Authors:Tahirov, T.H, Chivers, P.T.
Deposit date:2005-01-31
Release date:2005-04-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition
J.Mol.Biol., 348, 2005
1VDV
DownloadVisualize
BU of 1vdv by Molmil
Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
Descriptor: 1-[3-CYANO-4-(NEOPENTYLOXY)PHENYL]-1H-PYRAZOLE-4-CARBOXYLIC ACID, ACETIC ACID, CALCIUM ION, ...
Authors:Fukunari, A, Okamoto, K, Nishino, T, Eger, B.T, Pai, E.F, Kamezawa, M, Yamada, I, Kato, N.
Deposit date:2004-03-25
Release date:2004-12-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Y-700 [1-[3-Cyano-4-(2,2-dimethylpropoxy)phenyl]-1H-pyrazole-4-carboxylic acid]: a potent xanthine oxidoreductase inhibitor with hepatic excretion
J.Pharmacol.Exp.Ther., 311, 2004
5NN5
DownloadVisualize
BU of 5nn5 by Molmil
Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with 1-deoxynojirimycin
Descriptor: 1,2-ETHANEDIOL, 1-DEOXYNOJIRIMYCIN, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roig-Zamboni, V, Cobucci-Ponzano, B, Iacono, R, Ferrara, M.C, Germany, S, Parenti, G, Bourne, Y, Moracci, M.
Deposit date:2017-04-08
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of human lysosomal acid alpha-glucosidase-a guide for the treatment of Pompe disease.
Nat Commun, 8, 2017
8ETG
DownloadVisualize
BU of 8etg by Molmil
Fkbp39 associated 60S nascent ribosome State 3
Descriptor: 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
Authors:Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
Deposit date:2022-10-17
Release date:2022-11-30
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Mol.Cell, 82, 2022
8ESR
DownloadVisualize
BU of 8esr by Molmil
Ytm1 associated nascent 60S ribosome (-fkbp39) State 2
Descriptor: 25S rRNA (cytosine-C(5))-methyltransferase nop2, 60S ribosomal protein L13, 60S ribosomal protein L14, ...
Authors:Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
Deposit date:2022-10-14
Release date:2022-11-30
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Mol.Cell, 82, 2022
2BNH
DownloadVisualize
BU of 2bnh by Molmil
PORCINE RIBONUCLEASE INHIBITOR
Descriptor: RIBONUCLEASE INHIBITOR
Authors:Kobe, B, Deisenhofer, J.
Deposit date:1996-06-29
Release date:1997-03-12
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of ribonuclease inhibition by ribonuclease inhibitor protein based on the crystal structure of its complex with ribonuclease A.
J.Mol.Biol., 264, 1996
1H9W
DownloadVisualize
BU of 1h9w by Molmil
Native Dioclea Guianensis seed lectin
Descriptor: CALCIUM ION, MANGANESE (II) ION, SEED LECTIN
Authors:Romero, A, Wah, D.A, Sol, F.G.D, Cavada, B.S, Ramos, M.V, Grangeiro, T.B, Sampaio, A.H, Calvete, J.J.
Deposit date:2001-03-22
Release date:2001-03-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Native and Cd/Cd-Substituted Dioclea Guianensis Seed Lectin. A Novel Manganese-Binding Site and Structural Basis of Dimer-Tetramer Association
J.Mol.Biol., 310, 2001
6I4Q
DownloadVisualize
BU of 6i4q by Molmil
Crystal structure of the human dihydrolipoamide dehydrogenase at 1.75 Angstrom resolution
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, mitochondrial, ...
Authors:Nagy, B, Szabo, E, Wilk, P, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A.
Deposit date:2018-11-10
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Underlying molecular alterations in human dihydrolipoamide dehydrogenase deficiency revealed by structural analyses of disease-causing enzyme variants.
Hum.Mol.Genet., 28, 2019
6BMN
DownloadVisualize
BU of 6bmn by Molmil
Structure of human DHHC20 palmitoyltransferase, space group P63
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, ZINC ION, ...
Authors:Rana, M.S, Lee, C.-J, Banerjee, A.
Deposit date:2017-11-15
Release date:2018-01-24
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Fatty acyl recognition and transfer by an integral membraneS-acyltransferase.
Science, 359, 2018
6IBI
DownloadVisualize
BU of 6ibi by Molmil
Copper binding protein from Laetisaria arvalis (LaX325)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity CAZyme, COPPER (II) ION, ...
Authors:Frandsen, K.E.H, Tandrup, T, Labourel, A, Haon, M, Berrin, J.-G, Lo Leggio, L.
Deposit date:2018-11-30
Release date:2019-11-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:A fungal family of lytic polysaccharide monooxygenase-like copper proteins.
Nat.Chem.Biol., 16, 2020
2BJ7
DownloadVisualize
BU of 2bj7 by Molmil
NIKR IN CLOSED CONFORMATION AND NICKEL BOUND TO HIGH-AFFINITY SITES
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Tahirov, T.H.
Deposit date:2005-01-31
Release date:2005-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition
J.Mol.Biol., 348, 2005
6I4U
DownloadVisualize
BU of 6i4u by Molmil
Crystal structure of the disease-causing G426E mutant of the human dihydrolipoamide dehydrogenase
Descriptor: Dihydrolipoyl dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Szabo, E, Wilk, P, Hubert, A, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A.
Deposit date:2018-11-10
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Underlying molecular alterations in human dihydrolipoamide dehydrogenase deficiency revealed by structural analyses of disease-causing enzyme variants.
Hum.Mol.Genet., 28, 2019
1LOG
DownloadVisualize
BU of 1log by Molmil
X-RAY STRUCTURE OF A (ALPHA-MAN(1-3)BETA-MAN(1-4)GLCNAC)-LECTIN COMPLEX AT 2.1 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, LEGUME ISOLECTIN I (ALPHA CHAIN), LEGUME ISOLECTIN I (BETA CHAIN), ...
Authors:Bourne, Y, Cambillau, C.
Deposit date:1994-01-27
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of a (alpha-Man(1-3)beta-Man(1-4)GlcNAc)-lectin complex at 2.1-A resolution. The role of water in sugar-lectin interaction.
J.Biol.Chem., 265, 1990
6I4Z
DownloadVisualize
BU of 6i4z by Molmil
Crystal structure of the disease-causing P453L mutant of the human dihydrolipoamide dehydrogenase
Descriptor: Dihydrolipoyl dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Szabo, E, Wilk, P, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A.
Deposit date:2018-11-12
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.342 Å)
Cite:Underlying molecular alterations in human dihydrolipoamide dehydrogenase deficiency revealed by structural analyses of disease-causing enzyme variants.
Hum.Mol.Genet., 28, 2019
2BQR
DownloadVisualize
BU of 2bqr by Molmil
DNA Adduct Bypass Polymerization by Sulfolobus solfataricus Dpo4. Analysis and Crystal Structures of Multiple Base-Pair Substitution and Frameshift Products with the Adduct 1,N2-Ethenoguanine
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*C)-3', 5'-D(*TP*CP*AP*TP*GNEP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Irimia, A, Loukachevitch, L.V, Egli, M.
Deposit date:2005-04-27
Release date:2005-06-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:DNA Adduct Bypass Polymerization by Sulfolobus Solfataricus DNA Polymerase Dpo4: Analysis and Crystal Structures of Multiple Base Pair Substitution and Frameshift Products with the Adduct 1,N2-Ethenoguanine.
J.Biol.Chem., 280, 2005
5NN3
DownloadVisualize
BU of 5nn3 by Molmil
Crystal structure of human lysosomal acid-alpha-glucosidase, GAA
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roig-Zamboni, V, Cobucci-Ponzano, B, Iacono, R, Ferrara, M.C, Germany, S, Parenti, G, Bourne, Y, Moracci, M.
Deposit date:2017-04-08
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of human lysosomal acid alpha-glucosidase-a guide for the treatment of Pompe disease.
Nat Commun, 8, 2017
2BJ1
DownloadVisualize
BU of 2bj1 by Molmil
NIKR IN OPEN CONFORMATION AND NICKEL BOUND TO HIGH-AFFINITY SITES
Descriptor: CHLORIDE ION, NICKEL (II) ION, NICKEL RESPONSIVE REGULATOR
Authors:Tahirov, T.H.
Deposit date:2005-01-27
Release date:2005-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition
J.Mol.Biol., 348, 2005
1D17
DownloadVisualize
BU of 1d17 by Molmil
DNA-NOGALAMYCIN INTERACTIONS
Descriptor: DNA (5'-D(*(5CM)P*GP*TP*AP*(5CM)P*G)-3'), NOGALAMYCIN
Authors:Egli, M, Williams, L.D, Frederick, C.A, Rich, A.
Deposit date:1990-08-08
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA-nogalamycin interactions.
Biochemistry, 30, 1991
1VEU
DownloadVisualize
BU of 1veu by Molmil
Crystal structure of the p14/MP1 complex at 2.15 A resolution
Descriptor: Late endosomal/lysosomal Mp1 interacting protein, Mitogen-activated protein kinase kinase 1 interacting protein 1
Authors:Kurzbauer, R, Teis, D, Maurer-Stroh, S, Eisenhaber, F, Hekman, M, Bourenkov, G.P, Bartunik, H.D, Huber, L.A, Clausen, T.
Deposit date:2004-04-05
Release date:2004-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the p14/MP1 scaffolding complex: How a twin couple attaches mitogen- activated protein kinase signaling to late endosomes
Proc.Natl.Acad.Sci.USA, 101, 2004
1LYA
DownloadVisualize
BU of 1lya by Molmil
CRYSTAL STRUCTURES OF NATIVE AND INHIBITED FORMS OF HUMAN CATHEPSIN D: IMPLICATIONS FOR LYSOSOMAL TARGETING AND DRUG DESIGN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CATHEPSIN D, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Baldwin, E.T, Bhat, T.N, Gulnik, S, Erickson, J.W.
Deposit date:1993-04-22
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of native and inhibited forms of human cathepsin D: implications for lysosomal targeting and drug design.
Proc.Natl.Acad.Sci.USA, 90, 1993
2CHA
DownloadVisualize
BU of 2cha by Molmil
THE STRUCTURE OF CRYSTALLINE ALPHA-CHYMOTRYPSIN, $V.THE ATOMIC STRUCTURE OF TOSYL-ALPHA-CHYMOTRYPSIN AT 2 ANGSTROMS RESOLUTION
Descriptor: ALPHA-CHYMOTRYPSIN A, PARA-TOLUENE SULFONATE
Authors:Birktoft, J.J, Blow, D.M.
Deposit date:1975-01-01
Release date:1977-01-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of crystalline -chymotrypsin. V. The atomic structure of tosyl- -chymotrypsin at 2 A resolution.
J.Mol.Biol., 68, 1972

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon