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8WEV
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BU of 8wev by Molmil
Crystal structure of Feruoyl-CoA Synthetase complexed with AMP from Amycolatopsis thermoflava
Descriptor: ADENOSINE MONOPHOSPHATE, Feruloyl-CoA Synthetase, MAGNESIUM ION
Authors:Seok, J, Kim, K.-J.
Deposit date:2023-09-18
Release date:2024-09-25
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural analysis of feruloyl-CoA synthetase from Amycolatopsis thermoflava.
To Be Published
4P0U
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BU of 4p0u by Molmil
YhdE E33A p4 space group
Descriptor: Maf-like protein YceF
Authors:Zheng, J, Jin, J, Wang, N, Jia, Z.
Deposit date:2014-02-23
Release date:2014-05-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:YhdE E33A p4 space group
To Be Published
9FAY
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BU of 9fay by Molmil
Gcase in complex with small molecule inhibitor 1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Tisi, D, Cleasby, A.
Deposit date:2024-05-10
Release date:2024-07-03
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment-Based Discovery of a Series of Allosteric-Binding Site Modulators of beta-Glucocerebrosidase.
J.Med.Chem., 67, 2024
9BRW
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BU of 9brw by Molmil
SARS-CoV-2 Papain-like Protease (PLpro) with Fragment 7
Descriptor: CHLORIDE ION, N-(2-chlorophenyl)-1-methyl-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Papain-like protease nsp3, ...
Authors:Amporndanai, K, Zhao, B, Fesik, S.W.
Deposit date:2024-05-11
Release date:2024-07-31
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fragment-Based Screen of SARS-CoV-2 Papain-like Protease (PL pro ).
Acs Med.Chem.Lett., 15, 2024
8Z4R
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BU of 8z4r by Molmil
The crystal structure of a Hydroquinone Dioxygenase PaD with substrate
Descriptor: 2-methoxy-6-methyl-benzene-1,4-diol, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Liu, Z.W, Huang, J.-W, Wang, Y.X, Chen, C.-C, Guo, R.-T.
Deposit date:2024-04-17
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Substrate specificity of a branch of aromatic dioxygenases determined by three distinct motifs.
Nat Commun, 15, 2024
9CJ0
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BU of 9cj0 by Molmil
The High-Resolution Structure of a Variable Lymphocyte Receptor from Petromyzon marinus Capable of Binding to the Brain Extracellular Matrix
Descriptor: 3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACID, SULFATE ION, Variable Lymphocyte Receptor
Authors:Appelt, E.A, Thoden, J.B, Shusta, E.V, Holden, H.M.
Deposit date:2024-07-05
Release date:2024-07-31
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The High-Resolution Structure of a Variable Lymphocyte Receptor from Petromyzon marinus Capable of Binding to the Brain Extracellular Matrix
To Be Published
4P1Q
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BU of 4p1q by Molmil
GREEN FLUORESCENT PROTEIN E222H VARIANT
Descriptor: Green fluorescent protein, SODIUM ION
Authors:Klein, M, Carius, Y, Auerbach, D, Franz, S, Jung, G, Lancaster, C.R.D.
Deposit date:2014-02-27
Release date:2014-07-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Replacement of Highly Conserved E222 by the Photostable Non-photoconvertible Histidine in GFP.
Chembiochem, 15, 2014
9FAZ
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BU of 9faz by Molmil
Gcase in complex with small molecule inhibitor 1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Tisi, D, Cleasby, A.
Deposit date:2024-05-10
Release date:2024-07-03
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Fragment-Based Discovery of a Series of Allosteric-Binding Site Modulators of beta-Glucocerebrosidase.
J.Med.Chem., 67, 2024
4P62
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BU of 4p62 by Molmil
Directed evolution of a B3 metallo-beta-lactamase AIM-1
Descriptor: 1,2-ETHANEDIOL, Metallo-beta-lactamase AIM-1, ZINC ION
Authors:Hou, C.-F.D, Collyer, C, Ollis, D.L.
Deposit date:2014-03-21
Release date:2015-05-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Directed evolution of a B3 metallo-beta-lactamase AIM-1
To Be Published
9BDY
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BU of 9bdy by Molmil
AT-centric NF-kappaB RelA binding DNA
Descriptor: ACETATE ION, DNA (5'-D(*CP*GP*GP*AP*AP*TP*TP*TP*CP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*G)-3'), ...
Authors:Biswas, T, Shahabi, S, Tsodikov, O.V, Ghosh, G.
Deposit date:2024-04-13
Release date:2024-08-07
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
4P6B
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BU of 4p6b by Molmil
Crystal structure of Est-Y29,a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library
Descriptor: Est-Y29
Authors:Ngo, T.D, Ryu, B.H, Ju, H.S, Jang, E.J, Kim, K.K, Kim, D.H.
Deposit date:2014-03-24
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic analysis and biochemical applications of a novel penicillin-binding protein/ beta-lactamase homologue from a metagenomic library.
Acta Crystallogr.,Sect.D, 70, 2014
9BD2
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BU of 9bd2 by Molmil
MAGE-A3 MHD crystal soaked with KL861
Descriptor: (furan-2-yl)[4-({(5P)-5-(1H-indazol-4-yl)-2-[3-(morpholin-4-yl)propoxy]phenyl}methyl)piperazin-1-yl]methanone, Melanoma-associated antigen 3
Authors:Butrin, A, Krone, M.W, Li, K, Bond, M.J, Linhares, B.M, Crews, C.
Deposit date:2024-04-10
Release date:2024-09-18
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Development of Ligands and Degraders Targeting MAGE-A3.
J.Am.Chem.Soc., 146, 2024
9BBI
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BU of 9bbi by Molmil
Co-crystal structure of human DDB1 bound to fragment UB028669
Descriptor: 3-([1,3]oxazolo[4,5-b]pyridin-2-yl)aniline, DNA damage-binding protein 1, L(+)-TARTARIC ACID, ...
Authors:Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2024-04-05
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Co-crystal structure of human DDB1 bound to fragment UB028669
To be published
9FLT
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BU of 9flt by Molmil
Crystal structure of human Haspin (GSG2) kinase bound to chemical probe MU1920
Descriptor: NICKEL (II) ION, Serine/threonine-protein kinase haspin, ~{N}-(1,4-dimethylpyrazol-3-yl)-3-pyridin-4-yl-thieno[3,2-b]pyridin-5-amine
Authors:Kraemer, A, Paruch, K, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-06-05
Release date:2024-09-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human Haspin (GSG2) kinase bound to chemical probe MU1920
To Be Published
6MHK
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BU of 6mhk by Molmil
Crystal structure of ketosynthase nine from bacillaene polyketide synthase in Bacillus amyloliquefaciens
Descriptor: Polyketide synthase
Authors:Meinke, J.L, Keatinge-Clay, A.T.
Deposit date:2018-09-18
Release date:2019-09-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of ketosynthase nine from BaeM
To Be Published
9J9C
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BU of 9j9c by Molmil
Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin and UDP2Fglucose in the presence of retinol
Descriptor: 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE
Authors:Arold, S.T, Hameed, U.F.S.
Deposit date:2024-08-22
Release date:2024-09-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin and UDP2Fglucose in the presence of retinol
To Be Published
4P76
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BU of 4p76 by Molmil
Cellular response to a crystal-forming protein
Descriptor: Photoconvertible fluorescent protein, SODIUM ION
Authors:Tsutsui, H, Jinno, Y, Shoda, K, Tomita, A, Matsuda, M, Yamashita, E, Katayama, H, Nakagawa, A, Miyawaki, A.
Deposit date:2014-03-26
Release date:2015-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A diffraction-quality protein crystal processed as an autophagic cargo
Mol.Cell, 58, 2015
9CU9
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BU of 9cu9 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/L36K at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Zhang, Y, Schlessman, J.L, Robinson, A.C, Garcia-Moreno E, B.
Deposit date:2024-07-26
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/L36K at cryogenic temperature
To Be Published
9B74
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BU of 9b74 by Molmil
Crystal structure of humanized 44H10 Fab Version 14
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, SODIUM ION, ...
Authors:Kassardjian, A, Julien, J.P.
Deposit date:2024-03-27
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Humanization of Pan-HLA-DR mAb 44H10 Hinges on Critical Residues in the Antibody Framework.
Antibodies, 13, 2024
9ENG
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BU of 9eng by Molmil
Structure of K.pneumoniae LpxH in complex with EBL-3218
Descriptor: MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase, ~{N}-[4-[4-[3,5-bis(chloranyl)phenyl]piperazin-1-yl]sulfonylphenyl]-3-(methylsulfonylamino)benzamide
Authors:Sooriyaarachchi, S, Bergfors, T, Jones, T.A, Mowbray, S.L.
Deposit date:2024-03-12
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design, synthesis, and in vitro biological evaluation of meta-sulfonamidobenzamide-based antibacterial LpxH inhibitors.
Eur.J.Med.Chem., 278, 2024
9BE1
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BU of 9be1 by Molmil
CG-centric NF-kappaB RelA binding DNA
Descriptor: ACETATE ION, DNA (5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*GP*CP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*G)-3'), ZINC ION
Authors:Biswas, T, Shahabi, S, Tsodikov, O.V, Wang, V, Ghosh, G.
Deposit date:2024-04-13
Release date:2024-08-07
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
4P34
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BU of 4p34 by Molmil
Crystal structure of DJ-1 in sulfenic acid form (fresh crystal)
Descriptor: PENTAETHYLENE GLYCOL, Protein DJ-1
Authors:Tashiro, S, Wu, C.-X, Hoang, Q.Q, Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2014-03-05
Release date:2014-04-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Thermodynamic and Structural Characterization of the Specific Binding of Zn(II) to Human Protein DJ-1.
Biochemistry, 53, 2014
8XJJ
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BU of 8xjj by Molmil
Co-crystal structure of SOS-1 and a potent, selective and orally bioavailable SOS1 inhibitor RGT-018
Descriptor: 1,2-ETHANEDIOL, 5-[4-[[(1~{R})-1-[3-[bis(fluoranyl)methyl]-2-fluoranyl-phenyl]ethyl]amino]-2-methyl-6-morpholin-4-yl-7-oxidanylidene-pyrido[4,3-d]pyrimidin-8-yl]pyridine-2-carbonitrile, Son of sevenless homolog 1
Authors:Ren, X.
Deposit date:2023-12-21
Release date:2024-08-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of RGT-018: a Potent, Selective and Orally Bioavailable SOS1 Inhibitor for KRAS-driven Cancers.
Mol.Cancer Ther., 2024
9CIJ
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BU of 9cij by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/L36R at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Zhang, Y, Schlessman, L.J, Siegler, M.A, Garcia-Moreno E, B.
Deposit date:2024-07-03
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/L36R at cryogenic temperature
To Be Published
4P2X
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BU of 4p2x by Molmil
Swapped Dimer of Mycobacterial Adenylyl cyclase Rv1625c: Form 2
Descriptor: Adenylate cyclase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Barathy, D.V, Mattoo, R, Visweswariah, S.S, Suguna, K.
Deposit date:2014-03-05
Release date:2014-09-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:New structural forms of a mycobacterial adenylyl cyclase Rv1625c.
Iucrj, 1, 2014

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PDB entries from 2024-09-25

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