Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NNQ
DownloadVisualize
BU of 4nnq by Molmil
Crystal structure of LnmF protein from Streptomyces amphibiosporus
Descriptor: Putative enoyl-CoA hydratase, SULFATE ION
Authors:Michalska, K, Bigelow, L, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-11-18
Release date:2014-01-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:

3NL3
DownloadVisualize
BU of 3nl3 by Molmil
The Crystal Structure of Candida glabrata THI6, a Bifunctional Enzyme involved in Thiamin Biosyhthesis of Eukaryotes
Descriptor: MAGNESIUM ION, THIAMIN PHOSPHATE, Thiamine biosynthetic bifunctional enzyme
Authors:Paul, D, Chatterjee, A, Begley, T.P, Ealick, S.E.
Deposit date:2010-06-21
Release date:2010-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.007 Å)
Cite:Domain Organization in Candida glabrata THI6, a Bifunctional Enzyme Required for Thiamin Biosynthesis in Eukaryotes .
Biochemistry, 49, 2010
3G8R
DownloadVisualize
BU of 3g8r by Molmil
Crystal structure of putative spore coat polysaccharide biosynthesis protein E from Chromobacterium violaceum ATCC 12472
Descriptor: Probable spore coat polysaccharide biosynthesis protein E, ZINC ION
Authors:Malashkevich, V.N, Toro, R, Morano, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-12
Release date:2009-04-07
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of putative spore coat polysaccharide biosynthesis protein E from Chromobacterium violaceum ATCC 12472
To be Published
4NG0
DownloadVisualize
BU of 4ng0 by Molmil
Lar_0958 a cell surface adhesin from lactobacillus reuteri
Descriptor: LAR_0958 cell surface adhesin
Authors:Etzold, S, Mackenzie, D.A, Juge, N, Hemmings, A.M.
Deposit date:2013-11-01
Release date:2014-07-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structural and molecular insights into novel surface-exposed mucus adhesins from Lactobacillus reuteri human strains.
Mol.Microbiol., 92, 2014
3G9C
DownloadVisualize
BU of 3g9c by Molmil
Crystal structure of the product Bacillus anthracis glmS ribozyme
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLMS RIBOZYME, MAGNESIUM ION, ...
Authors:Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D.
Deposit date:2009-02-13
Release date:2009-11-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
4J9U
DownloadVisualize
BU of 4j9u by Molmil
Crystal Structure of the TrkH/TrkA potassium transport complex
Descriptor: HEXATANTALUM DODECABROMIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, POTASSIUM ION, ...
Authors:Cao, Y, Jin, X, Huang, H, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2013-02-17
Release date:2013-04-03
Last modified:2013-05-01
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Gating of the TrkH ion channel by its associated RCK protein TrkA.
Nature, 496, 2013
3G2Y
DownloadVisualize
BU of 3g2y by Molmil
CTX-M-9 class A beta-lactamase complexed with compound 1 (GF4)
Descriptor: 4-ethyl-5-methyl-2-(1H-tetrazol-5-yl)-1,2-dihydro-3H-pyrazol-3-one, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE
Authors:Chen, Y, Shoichet, B.K.
Deposit date:2009-02-01
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Molecular docking and ligand specificity in fragment-based inhibitor discovery
Nat.Chem.Biol., 5, 2009
3N78
DownloadVisualize
BU of 3n78 by Molmil
SgrAI bound to Secondary Site DNA and Mg(II)
Descriptor: DNA (5'-D(*AP*GP*TP*CP*CP*AP*CP*CP*GP*GP*GP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*CP*CP*CP*CP*CP*GP*GP*TP*GP*GP*AP*CP*T)-3'), MAGNESIUM ION, ...
Authors:Horton, N.C, Little, E.J, Dunten, P.W.
Deposit date:2010-05-26
Release date:2010-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:New clues in the allosteric activation of DNA cleavage by SgrAI: structures of SgrAI bound to cleaved primary-site DNA and uncleaved secondary-site DNA.
Acta Crystallogr.,Sect.D, 67, 2011
4JE4
DownloadVisualize
BU of 4je4 by Molmil
Crystal Structure of Monobody NSa1/SHP2 N-SH2 Domain Complex
Descriptor: Monobody NSa1, Tyrosine-protein phosphatase non-receptor type 11
Authors:Sha, F, Koide, S.
Deposit date:2013-02-26
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Dissection of the BCR-ABL signaling network using highly specific monobody inhibitors to the SHP2 SH2 domains.
Proc.Natl.Acad.Sci.USA, 110, 2013
3N81
DownloadVisualize
BU of 3n81 by Molmil
T244A mutant of Human mitochondrial aldehyde dehydrogenase, apo form
Descriptor: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, mitochondrial, ...
Authors:Gonzalez-Segura, L, Hurley, T.D.
Deposit date:2010-05-27
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational Selection During Catalysis: The role of Threonine 244 in ALDH2
To be published
4JEO
DownloadVisualize
BU of 4jeo by Molmil
Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-27
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4NLQ
DownloadVisualize
BU of 4nlq by Molmil
Poliovirus Polymerase - C290F Loop Mutant
Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ...
Authors:Sholders, A.J, Peersen, O.B.
Deposit date:2013-11-14
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Distinct conformations of a putative translocation element in poliovirus polymerase.
J.Mol.Biol., 426, 2014
3N9Y
DownloadVisualize
BU of 3n9y by Molmil
Crystal structure of human CYP11A1 in complex with cholesterol
Descriptor: Adrenodoxin, CHOLESTEROL, Cholesterol side-chain cleavage enzyme, ...
Authors:Strushkevich, N.V, MacKenzie, F, Tempel, W, Botchkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J.U, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-05-31
Release date:2011-06-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for pregnenolone biosynthesis by the mitochondrial monooxygenase system.
Proc.Natl.Acad.Sci.USA, 108, 2011
4JEU
DownloadVisualize
BU of 4jeu by Molmil
Crystal Structure of Munc18a and Syntaxin1 with native N-terminus complex
Descriptor: Syntaxin-1A, Syntaxin-binding protein 1
Authors:Colbert, K.N, Hattendorf, D.A, Weiss, T.M, Burkhardt, P, Fasshauer, D, Weis, W.I.
Deposit date:2013-02-27
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Syntaxin1a variants lacking an N-peptide or bearing the LE mutation bind to Munc18a in a closed conformation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JFV
DownloadVisualize
BU of 4jfv by Molmil
Crystal structure of a bacterial fucosidase with iminosugar inhibitor (2S,3S,4R,5S)-2-[N-(methylferrocene)]aminoethyl-5-methylpyrrolidine-3,4-diol
Descriptor: (3alpha)-[({2-[(2S,3S,4R,5S)-3,4-dihydroxy-5-methylpyrrolidin-2-yl]ethyl}amino)methyl]ferrocene, IMIDAZOLE, SULFATE ION, ...
Authors:Wright, D.W, Davies, G.J.
Deposit date:2013-02-28
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:alpha-L-fucosidase inhibition by pyrrolidine-ferrocene hybrids: rationalization of ligand-binding properties by structural studies.
Chemistry, 19, 2013
4JHH
DownloadVisualize
BU of 4jhh by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with kinetin
Descriptor: MALONATE ION, MtN13 protein, N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE, ...
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
3NF1
DownloadVisualize
BU of 3nf1 by Molmil
Crystal structure of the TPR domain of kinesin light chain 1
Descriptor: Kinesin light chain 1
Authors:Tong, Y, Tempel, W, Shen, L, Shen, Y, Nedyalkova, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-06-09
Release date:2011-05-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the TPR domain of kinesin light chain 1
to be published
4JHT
DownloadVisualize
BU of 4jht by Molmil
Crystal Structure of AlkB in complex with 5-carboxy-8-hydroxyquinoline (IOX1)
Descriptor: 8-hydroxyquinoline-5-carboxylic acid, ACETATE ION, Alpha-ketoglutarate-dependent dioxygenase AlkB, ...
Authors:Aik, W.S, McDonough, M.A, Schofield, C.J.
Deposit date:2013-03-05
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:5-Carboxy-8-hydroxyquinoline is a Broad Spectrum 2-Oxoglutarate Oxygenase Inhibitor which Causes Iron Translocation.
Chem Sci, 4, 2013
4JHG
DownloadVisualize
BU of 4jhg by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, MALONATE ION, MtN13 protein, ...
Authors:Ruszkowski, M, Tusnio, K, Ciesielska, A, Brzezinski, K, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
3N7R
DownloadVisualize
BU of 3n7r by Molmil
Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism
Descriptor: Calcitonin gene-related peptide type 1 receptor, N-[(3R,6S)-6-(2,3-difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-2,3-dihydro-1H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide, N-{(1S)-5-amino-1-[(4-pyridin-4-ylpiperazin-1-yl)carbonyl]pentyl}-3,5-dibromo-Nalpha-{[4-(2-oxo-1,4-dihydroquinazolin-3 (2H)-yl)piperidin-1-yl]carbonyl}-D-tyrosinamide, ...
Authors:Ter Haar, E.
Deposit date:2010-05-27
Release date:2010-09-15
Last modified:2022-10-26
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Ectodomain Complex of the CGRP Receptor, a Class-B GPCR, Reveals the Site of Drug Antagonism.
Structure, 18, 2010
4NPJ
DownloadVisualize
BU of 4npj by Molmil
Extended-Synaptotagmin 2, C2A- and C2B-domains
Descriptor: ACETATE ION, CHLORIDE ION, Extended synaptotagmin-2, ...
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2013-11-21
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.
Structure, 22, 2014
4JI5
DownloadVisualize
BU of 4ji5 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JKC
DownloadVisualize
BU of 4jkc by Molmil
Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
3NII
DownloadVisualize
BU of 3nii by Molmil
The structure of UBR box (KIAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide KIAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIM
DownloadVisualize
BU of 3nim by Molmil
The structure of UBR box (RRAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RRAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon