Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MXW
DownloadVisualize
BU of 4mxw by Molmil
Structure of heterotrimeric lymphotoxin LTa1b2 bound to lymphotoxin beta receptor LTbR and anti-LTa Fab
Descriptor: Lymphotoxin-alpha, Lymphotoxin-beta, Tumor necrosis factor receptor superfamily member 3, ...
Authors:Sudhamsu, J, Yin, J.P, Hymowitz, S.G.
Deposit date:2013-09-26
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Dimerization of LT beta R by LT alpha 1 beta 2 is necessary and sufficient for signal transduction.
Proc.Natl.Acad.Sci.USA, 110, 2013
4BME
DownloadVisualize
BU of 4bme by Molmil
Crystal structure of the N terminal domain of human Galectin 8, F19Y mutant
Descriptor: GALECTIN-8, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Buzamet, E, Ruiz, F.M, Menendez, M, Romero, A, Gabius, H.J, Solis, D.
Deposit date:2013-05-07
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Natural Single Amino Acid Polymorphism (F19Y) in Human Galectin-8: Detection of Structural Alterations and Increased Growth-Regulatory Activity on Tumor Cells.
FEBS J., 281, 2014
6FU9
DownloadVisualize
BU of 6fu9 by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with the HMA domain of Pikm-1 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, NBS-LRR class disease resistance protein
Authors:Franceschetti, M, De la Concepcion, J.C, Banfield, M.J.
Deposit date:2018-02-26
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.
Nat Plants, 4, 2018
4NRV
DownloadVisualize
BU of 4nrv by Molmil
Crystal Structure of non-edited human NEIL1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endonuclease 8-like 1
Authors:Prakash, A, Doublie, S.
Deposit date:2013-11-27
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Genome and cancer single nucleotide polymorphisms of the human NEIL1 DNA glycosylase: Activity, structure, and the effect of editing.
Dna Repair, 14, 2014
4MXV
DownloadVisualize
BU of 4mxv by Molmil
Structure of Lymphotoxin alpha bound to anti-LTa Fab
Descriptor: Lymphotoxin-alpha, anti-Lymphotoxin alpha antibody heavy chain, anti-Lymphotoxin alpha antibody light chain
Authors:Yin, J.P, Hymowitz, S.G.
Deposit date:2013-09-26
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dimerization of LT beta R by LT alpha 1 beta 2 is necessary and sufficient for signal transduction.
Proc.Natl.Acad.Sci.USA, 110, 2013
4L95
DownloadVisualize
BU of 4l95 by Molmil
Crystal structure of gamma glutamyl hydrolase (H218N) from zebrafish
Descriptor: GLYCEROL, Gamma-glutamyl hydrolase
Authors:Chuankhayan, P, Kao, T.-T, Chen, C.-J, Fu, T.-F.
Deposit date:2013-06-18
Release date:2014-05-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural insights into the hydrolysis and polymorphism of methotrexate polyglutamate by zebrafish gamma-glutamyl hydrolase
J.Med.Chem., 56, 2013
4MNF
DownloadVisualize
BU of 4mnf by Molmil
Crystal structure of BRAF-V600E bound to GDC0879
Descriptor: 2-{4-[(1E)-1-(hydroxyimino)-2,3-dihydro-1H-inden-5-yl]-3-(pyridin-4-yl)-1H-pyrazol-1-yl}ethanol, CHLORIDE ION, Serine/threonine-protein kinase B-raf
Authors:Sudhamsu, J, Haling, J.R, Morales, T, Brandhuber, B, Hymowitz, S.G.
Deposit date:2013-09-10
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structure of the BRAF-MEK Complex Reveals a Kinase Activity Independent Role for BRAF in MAPK Signaling.
Cancer Cell, 26, 2014
2R5P
DownloadVisualize
BU of 2r5p by Molmil
Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Indinavir
Descriptor: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, Protease, ...
Authors:Coman, R.M, Robbins, A.H, McKenna, R, Dunn, B.M.
Deposit date:2007-09-04
Release date:2007-11-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Contribution of Naturally Occurring Polymorphisms in Altering the Biochemical and Structural Characteristics of HIV-1 Subtype C Protease
Biochemistry, 47, 2008
2R5Q
DownloadVisualize
BU of 2r5q by Molmil
Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Nelfinavir
Descriptor: 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE, Protease
Authors:Coman, R.M, Robbins, A.H, McKenna, R, Dunn, B.M.
Deposit date:2007-09-04
Release date:2007-11-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Contribution of Naturally Occurring Polymorphisms in Altering the Biochemical and Structural Characteristics of HIV-1 Subtype C Protease
Biochemistry, 47, 2008
6FUD
DownloadVisualize
BU of 6fud by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikA with the HMA domain of Pikm-1 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, NBS-LRR class disease resistance protein
Authors:Franceschetti, M, De la Concepcion, J.C, Banfield, M.J.
Deposit date:2018-02-26
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.
Nat Plants, 4, 2018
6FUB
DownloadVisualize
BU of 6fub by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikE with the HMA domain of Pikm-1 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, NBS-LRR class disease resistance protein
Authors:Franceschetti, M, De la Concepcion, J.C, Banfield, M.J.
Deposit date:2018-02-26
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.
Nat Plants, 4, 2018
3NHD
DownloadVisualize
BU of 3nhd by Molmil
GYVLGS segment 127-132 from human prion with V129
Descriptor: ACETIC ACID, Major prion protein
Authors:Apostol, M.I, Eisenberg, D.
Deposit date:2010-06-14
Release date:2010-08-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystallographic studies of prion protein (PrP) segments suggest how structural changes encoded by polymorphism at residue 129 modulate susceptibility to human prion disease.
J.Biol.Chem., 285, 2010
6G11
DownloadVisualize
BU of 6g11 by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikE with the HMA domain of Pikp-1 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, Resistance protein Pikp-1
Authors:De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
Deposit date:2018-03-20
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.
Nat Plants, 4, 2018
3NOK
DownloadVisualize
BU of 3nok by Molmil
Crystal structure of Myxococcus xanthus Glutaminyl Cyclase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, DECYLAMINE-N,N-DIMETHYL-N-OXIDE, ...
Authors:Parthier, C, Carrillo, D.R, Stubbs, M.T.
Deposit date:2010-06-25
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Kinetic and structural characterization of bacterial glutaminyl cyclases from Zymomonas mobilis and Myxococcus xanthus
Biol.Chem., 391, 2010
3NOB
DownloadVisualize
BU of 3nob by Molmil
Structure of K11-linked di-ubiquitin
Descriptor: SULFATE ION, Ubiquitin
Authors:Dong, K.C, Matsumoto, M.L, Hymowitz, S.G.
Deposit date:2010-06-25
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:K11-Linked Polyubiquitination in Cell Cycle Control Revealed by a K11 Linkage-Specific Antibody.
Mol.Cell, 39, 2010
3P08
DownloadVisualize
BU of 3p08 by Molmil
Crystal structure of the human BTK kinase domain
Descriptor: Tyrosine-protein kinase BTK
Authors:Yu, C.L, Hymowitz, S.G.
Deposit date:2010-09-27
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel, specific BTK inhibitor antagonizes BCR and FcgR signaling and suppresses inflammatory arthritis
To be Published
6G10
DownloadVisualize
BU of 6g10 by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with the HMA domain of Pikp-1 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, CHLORIDE ION, Resistance protein Pikp-1
Authors:De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
Deposit date:2018-03-20
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.
Nat Plants, 4, 2018
3PUM
DownloadVisualize
BU of 3pum by Molmil
Crystal structure of P domain dimer of Norovirus VA207
Descriptor: Capsid
Authors:Chen, Y, Tan, M, Xia, M, Hao, N, Zhang, X.C, Huang, P, Jiang, X, Li, X, Rao, Z.
Deposit date:2010-12-06
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Crystallography of a Lewis-binding norovirus, elucidation of strain-specificity to the polymorphic human histo-blood group antigens
Plos Pathog., 7, 2011
3NHC
DownloadVisualize
BU of 3nhc by Molmil
GYMLGS segment 127-132 from human prion with M129
Descriptor: Major prion protein
Authors:Apostol, M.I, Eisenberg, D.
Deposit date:2010-06-14
Release date:2010-08-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystallographic studies of prion protein (PrP) segments suggest how structural changes encoded by polymorphism at residue 129 modulate susceptibility to human prion disease.
J.Biol.Chem., 285, 2010
3PVD
DownloadVisualize
BU of 3pvd by Molmil
Crystal structure of P domain dimer of Norovirus VA207 complexed with 3'-sialyl-Lewis x tetrasaccharide
Descriptor: Capsid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Chen, Y, Tan, M, Xia, M, Hao, N, Zhang, X.C, Huang, P, Jiang, X, Li, X, Rao, Z.
Deposit date:2010-12-06
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallography of a Lewis-binding norovirus, elucidation of strain-specificity to the polymorphic human histo-blood group antigens
Plos Pathog., 7, 2011
3OJ4
DownloadVisualize
BU of 3oj4 by Molmil
Crystal structure of the A20 ZnF4, ubiquitin and UbcH5A complex
Descriptor: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, Ubiquitin-conjugating enzyme E2 D1, ...
Authors:Bosanac, I, Hymowitz, S.G.
Deposit date:2010-08-20
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-κB Signaling
Mol.Cell, 40, 2010
3OJ3
DownloadVisualize
BU of 3oj3 by Molmil
Crystal structure of the A20 ZnF4 and ubiquitin complex
Descriptor: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION
Authors:Bosanac, I, Hymowitz, S.G.
Deposit date:2010-08-20
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling
Mol.Cell, 40, 2010
2B2K
DownloadVisualize
BU of 2b2k by Molmil
structure of Y104F IDI-1 mutant in complex with EIPP
Descriptor: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
Authors:Wouters, J.
Deposit date:2005-09-19
Release date:2006-09-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography
J.Biol.Chem., 281, 2006
3PTF
DownloadVisualize
BU of 3ptf by Molmil
X-ray structure of the non-covalent complex between UbcH5A and Ubiquitin
Descriptor: Polyubiquitin-B, Ubiquitin-conjugating enzyme E2 D1
Authors:Bosanac, I, Hymowitz, S.G.
Deposit date:2010-12-02
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Modulation of K11-Linkage Formation by Variable Loop Residues within UbcH5A.
J.Mol.Biol., 408, 2011
3PUN
DownloadVisualize
BU of 3pun by Molmil
Crystal structure of P domain dimer of Norovirus VA207 with Lewis y tetrasaccharide
Descriptor: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Chen, Y, Tan, M, Xia, M, Hao, N, Zhang, X.C, Huang, P, Jiang, X, Li, X, Rao, Z.
Deposit date:2010-12-06
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystallography of a Lewis-binding norovirus, elucidation of strain-specificity to the polymorphic human histo-blood group antigens
Plos Pathog., 7, 2011

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon