Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TYV
DownloadVisualize
BU of 6tyv by Molmil
Structure of Ku80 von Willebrand domain complexed with WRN Ku Binding Motif
Descriptor: THR-THR-ALA-GLN-GLN-ARG-LYS-CYS-PRO-GLU-TRP-MET-ASN, X-ray repair cross-complementing protein 5
Authors:Min, J, Pedersen, L.C.
Deposit date:2019-08-09
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.926111 Å)
Cite:Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
1ZS6
DownloadVisualize
BU of 1zs6 by Molmil
structure of human nucleoside-diphosphate kinase 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3
Authors:Choe, J, Dimov, S, Arrowsmith, C, Edwards, A, Sundstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2005-05-23
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of human nucleoside-diphosphate kinase 3
To be Published
6A34
DownloadVisualize
BU of 6a34 by Molmil
Crystal structure of 5-methylthioribose 1-phosphate isomerase from Pyrococcus horikoshii OT3 - Form I
Descriptor: HEXANE-1,6-DIOL, Putative methylthioribose-1-phosphate isomerase
Authors:Kanaujia, S.P, Gogoi, P, Mordina, P.
Deposit date:2018-06-14
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the catalytic mechanism of 5-methylthioribose 1-phosphate isomerase.
J. Struct. Biol., 205, 2019
6UBE
DownloadVisualize
BU of 6ube by Molmil
Azide-triggered subtilisin SUBT_BACAM complexed with the peptide LFRAL
Descriptor: AZIDE ION, GLYCEROL, Peptide LFRAL, ...
Authors:Toth, E.A, Bryan, P.N, Orban, J, Gallagher, D.T, Custer, G.
Deposit date:2019-09-11
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering subtilisin proteases that specifically degrade active RAS.
Commun Biol, 4, 2021
6UC8
DownloadVisualize
BU of 6uc8 by Molmil
Guanine riboswitch bound to 8-aminoguanine
Descriptor: 8-AMINOGUANINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Matyjasik, M.M, Hall, S.D, Batey, R.T.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
5XVQ
DownloadVisualize
BU of 5xvq by Molmil
Crystal structure of monkey Nicotinamide N-methyltransferase (NNMT) bound with end product, 1-methyl Nicotinamide (MNA)
Descriptor: 3-carbamoyl-1-methylpyridin-1-ium, GLYCEROL, Nicotinamide N-methyltransferase (NNMT), ...
Authors:Birudukota, S, Swaminathan, S, Thakur, M.K, Parveen, R, Kandan, S, Kannt, A, Gosu, R.
Deposit date:2017-06-28
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structures of monkey and mouse nicotinamide N-methyltransferase (NNMT) bound with end product, 1-methyl nicotinamide
Biochem. Biophys. Res. Commun., 491, 2017
6TYX
DownloadVisualize
BU of 6tyx by Molmil
Structure of Ku80 von Willebrand domain S229A mutant complexed with XLF Ku Binding Motif
Descriptor: LYS-GLY-LEU-PHE-MET, X-ray repair cross-complementing protein 5
Authors:Min, J, Pedersen, L.C.
Deposit date:2019-08-09
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89944351 Å)
Cite:Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
6TYU
DownloadVisualize
BU of 6tyu by Molmil
Structure of Ku80 von Willebrand domain complexed with MRI Ku Binding Motif
Descriptor: LYS-THR-ARG-VAL-LEU-PRO-SER-TRP-LEU-THR-ALA, X-ray repair cross-complementing protein 5
Authors:Min, J, Pedersen, L.C.
Deposit date:2019-08-09
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.46862721 Å)
Cite:Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
6UC9
DownloadVisualize
BU of 6uc9 by Molmil
Guanine riboswitch bound to O6-cyclohexylmethyl guanine
Descriptor: 6-O-CYCLOHEXYLMETHYL GUANINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.941 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
6UCD
DownloadVisualize
BU of 6ucd by Molmil
The crystal structure of Staphylococcus aureus super antigen-like protein SSL10
Descriptor: Exotoxin
Authors:Patel, D, Young, P.G, Bunker, R.D, Baker, E.N, Fraser, J.D.
Deposit date:2019-09-16
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The crystal structure of Staphylococcus aureus super antigen-like protein SSL10
To Be Published
1YPH
DownloadVisualize
BU of 1yph by Molmil
High resolution structure of bovine alpha-chymotrypsin
Descriptor: CHYMOTRYPSIN A, chain A, chain B, ...
Authors:Razeto, A, Galunsky, B, Kasche, V, Wilson, K.S, Lamzin, V.S.
Deposit date:2005-01-31
Release date:2006-02-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:High resolution structure of native bovine alpha-chymotrypsin
To be Published
6U50
DownloadVisualize
BU of 6u50 by Molmil
Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB)
Authors:Taylor, A.B, Sherwood, L.J, Hart, P.J, Hayhurst, A.
Deposit date:2019-08-26
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Paratope Duality and Gullying are Among the Atypical Recognition Mechanisms Used by a Trio of Nanobodies to Differentiate Ebolavirus Nucleoproteins.
J.Mol.Biol., 431, 2019
6U58
DownloadVisualize
BU of 6u58 by Molmil
Toho1 Beta Lactamase Glu166Gln Mutant
Descriptor: Beta-lactamase, SULFATE ION
Authors:Langan, P.S, Sullivan, B, Weiss, K.L.
Deposit date:2019-08-27
Release date:2020-02-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Probing the Role of the Conserved Residue Glu166 in a Class A Beta-Lactamase Using Neutron and X-ray Protein Crystallography
Acta Crystallogr.,Sect.D, 76, 2020
6U7D
DownloadVisualize
BU of 6u7d by Molmil
Recombinant stem bromelain precursor
Descriptor: FBSB
Authors:Yongqing, T, Pike, R.N, Wijeyewickrema, L.C.
Deposit date:2019-09-02
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of a Recombinant Stem Bromelain Precursor
To be published
6UBU
DownloadVisualize
BU of 6ubu by Molmil
1.60 A resolution structure of the guanine riboswitch bound to guanine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), GUANINE, ...
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-09-13
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
6U2D
DownloadVisualize
BU of 6u2d by Molmil
PmtCD peptide exporter basket domain
Descriptor: ABC transporter ATP-binding protein, IODIDE ION, SULFATE ION
Authors:Zeytuni, N, Strynadka, N.C.J.
Deposit date:2019-08-19
Release date:2020-10-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural insight into the Staphylococcus aureus ATP-driven exporter of virulent peptide toxins
Sci Adv, 6, 2020
1ZRH
DownloadVisualize
BU of 1zrh by Molmil
Crystal structure of Human heparan sulfate glucosamine 3-O-sulfotransferase 1 in complex with PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Heparan sulfate glucosamine 3-O-sulfotransferase 1
Authors:Dong, A, Dombrovski, L, Loppnau, P, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2005-05-19
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Human heparan sulfate glucosamine 3-O-sulfotransferase 1 in complex with PAP
To be Published
6UFL
DownloadVisualize
BU of 6ufl by Molmil
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199Q mutant) from Amycolatopsis mediterranei (AmGH128_I) in the complex with laminarihexaose
Descriptor: Glyco_hydro_cc domain-containing protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
Authors:Cordeiro, R.L, Domingues, M.N, Vieira, P.S, Santos, C.R, Murakami, M.T.
Deposit date:2019-09-24
Release date:2020-05-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6U0C
DownloadVisualize
BU of 6u0c by Molmil
Neutron crystal structure of wtT4LE
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published
6UKE
DownloadVisualize
BU of 6uke by Molmil
HhaI endonuclease in Complex with Iodine-Labelled DNA
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Horton, J.R, Cheng, X.
Deposit date:2019-10-04
Release date:2019-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure of HhaI endonuclease with cognate DNA at an atomic resolution of 1.0 angstrom.
Nucleic Acids Res., 48, 2020
6U52
DownloadVisualize
BU of 6u52 by Molmil
Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 634-738
Descriptor: Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB), CHLORIDE ION, Nucleoprotein
Authors:Taylor, A.B, Sherwood, L.J, Hart, P.J, Hayhurst, A.
Deposit date:2019-08-26
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Paratope Duality and Gullying are Among the Atypical Recognition Mechanisms Used by a Trio of Nanobodies to Differentiate Ebolavirus Nucleoproteins.
J.Mol.Biol., 431, 2019
6UBH
DownloadVisualize
BU of 6ubh by Molmil
Structure of the MM7 Erbin PDZ variant in complex with a high-affinity peptide
Descriptor: Erbin, SODIUM ION, peptide
Authors:Singer, A.U, Teyra, J, McLaughlin, M, Ernst, A, Sicheri, F, Sidhu, S.S.
Deposit date:2019-09-11
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comprehensive Assessment of the Relationship Between Site -2 Specificity and Helix alpha 2 in the Erbin PDZ Domain.
J.Mol.Biol., 433, 2021
6UC7
DownloadVisualize
BU of 6uc7 by Molmil
Structure of guanine riboswitch bound to N2-acetyl guanine
Descriptor: COBALT HEXAMMINE(III), N-(6-oxo-6,9-dihydro-3H-purin-2-yl)acetamide, guanine riboswitch
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
6UFZ
DownloadVisualize
BU of 6ufz by Molmil
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199Q mutant) from Amycolatopsis mediterranei (AmGH128_I)
Descriptor: Glyco_hydro_cc domain-containing protein
Authors:Cordeiro, R.L, Domingues, M.N, Vieira, P.S, Santos, C.R, Murakami, M.T.
Deposit date:2019-09-25
Release date:2020-05-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6BBR
DownloadVisualize
BU of 6bbr by Molmil
Room temperature neutron/X-ray structure of AAC-VIa
Descriptor: AAC 3-VI protein, MAGNESIUM ION
Authors:Cuneo, M.J, Kumar, P, Serpersu, E.H.
Deposit date:2017-10-19
Release date:2018-02-28
Last modified:2023-10-04
Method:NEUTRON DIFFRACTION (2.002 Å), X-RAY DIFFRACTION
Cite:A low-barrier hydrogen bond mediates antibiotic resistance in a noncanonical catalytic triad.
Sci Adv, 4, 2018

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon