Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8HT9
DownloadVisualize
BU of 8ht9 by Molmil
CRYSTAL STRUCTURE OF BAT MHC CLASS I MYLU-B-67 FOR 2.2 ANGSTROM
Descriptor: Beta-2-microglobulin, GLU-PRO-GLN-SER-ALA-PRO-HIS-GLY-VAL, Ig-like domain-containing protein
Authors:Wang, S.Q, Zhang, N.Z.
Deposit date:2022-12-20
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CRYSTAL STRUCTURE OF BAT MHC CLASS I MYLU-B-67 FOR 2.2 ANGSTROM
To Be Published
4WE3
DownloadVisualize
BU of 4we3 by Molmil
STRUCTURE OF THE BINARY COMPLEX OF A ZINGIBER OFFICINALE DOUBLE BOND REDUCTASE IN COMPLEX WITH NADP MONOCLINIC CRYSTAL FORM
Descriptor: Double Bond Reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Collery, J, Langlois d'Estaintot, B, Buratto, J, Granier, T, Gallois, B, Willis, M.A, Sang, Y, Flores-Sanchez, I.J, Gang, D.R.
Deposit date:2014-09-09
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:STRUCTURE OF ZINGIBER OFFICINALE DOUBLE BOND REDUCTASE
to be published
8HSW
DownloadVisualize
BU of 8hsw by Molmil
CRYSTAL STRUCTURE OF BAT MHC CLASS I MYLU-B-67 FOR 2.1 ANGSTROM
Descriptor: Beta-2-microglobulin, Ig-like domain-containing protein, THR-PRO-GLN-SER-ALA-PRO-HIS-GLY-VAL
Authors:Wang, S.Q, Zhang, N.Z.
Deposit date:2022-12-20
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:CRYSTAL STRUCTURE OF BAT MHC CLASS I MYLU-B-67 FOR 2.1 ANGSTROM
To Be Published
8HSM
DownloadVisualize
BU of 8hsm by Molmil
CRYSTAL STRUCTURE OF BAT MHC CLASS I MYLU-B-67
Descriptor: Beta-2-microglobulin, Ig-like domain-containing protein, PHE-PRO-GLN-SER-ALA-PRO-HIS-GLY-VAL
Authors:Wang, S.Q, Zhang, N.Z.
Deposit date:2022-12-20
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CRYSTAL STRUCTURE OF BAT MHC CLASS I MYLU-B-67
To Be Published
7SS9
DownloadVisualize
BU of 7ss9 by Molmil
Late translocation intermediate with EF-G partially dissociated (Structure V)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Carbone, C.E, Loveland, A.B, Gamper, H.B, Hou, Y, Korostelev, A.A.
Deposit date:2021-11-10
Release date:2022-02-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP.
Nat Commun, 12, 2021
3VB7
DownloadVisualize
BU of 3vb7 by Molmil
Crystal structure of SARS-CoV 3C-like protease with M4Z
Descriptor: 1,2-ETHANEDIOL, 3C-like proteinase, GLYCEROL, ...
Authors:Chuck, C.P, Wong, K.B.
Deposit date:2011-12-31
Release date:2012-12-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Design, synthesis and crystallographic analysis of nitrile-based broad-spectrum peptidomimetic inhibitors for coronavirus 3C-like proteases
Eur.J.Med.Chem., 59C, 2012
3CLD
DownloadVisualize
BU of 3cld by Molmil
Ligand binding domain of the glucocorticoid receptor complexed with fluticazone furoate
Descriptor: (6alpha,11alpha,14beta,16alpha,17alpha)-6,9-difluoro-17-{[(fluoromethyl)sulfanyl]carbonyl}-11-hydroxy-16-methyl-3-oxoan drosta-1,4-dien-17-yl furan-2-carboxylate, Glucocorticoid receptor, Tif2 coactivator motif
Authors:Shewchuk, L.M, McLay, I, Stewart, E, Biggadike, K.B, Hassell, A.M, Bledsoe, R.K.
Deposit date:2008-03-18
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:X-ray crystal structure of the novel enhanced-affinity glucocorticoid agonist fluticasone furoate in the glucocorticoid receptor-ligand binding domain.
J.Med.Chem., 51, 2008
5I08
DownloadVisualize
BU of 5i08 by Molmil
Prefusion structure of a human coronavirus spike protein
Descriptor: Spike glycoprotein,Foldon chimera
Authors:Kirchdoerfer, R.N, Cottrell, C.A, Wang, N, Pallesen, J, Yassine, H.M, Turner, H.L, Corbett, K.S, Graham, B.S, McLellan, J.S, Ward, A.B.
Deposit date:2016-02-03
Release date:2016-03-02
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Pre-fusion structure of a human coronavirus spike protein.
Nature, 531, 2016
2BYM
DownloadVisualize
BU of 2bym by Molmil
Histone fold heterodimer of the Chromatin Accessibility Complex
Descriptor: CADMIUM ION, CHRAC-14, CHRAC-16
Authors:Fernandez-Tornero, C, Hartlepp, K.F, Grune, T, Eberharter, A, Becker, P.B, Muller, C.W.
Deposit date:2005-08-03
Release date:2005-11-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Histone Fold Subunits of Drosophila Chrac Facilitate Nucleosome Sliding Through Dynamic DNA Interactions.
Mol.Cell.Biol., 25, 2005
6CJ4
DownloadVisualize
BU of 6cj4 by Molmil
CRYSTAL STRUCTURE OF PROTEIN CITE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH MAGNESIUM AND ACETOACETATE
Descriptor: ACETATE ION, ACETOACETIC ACID, Citrate lyase subunit beta-like protein, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wang, H, Bonanno, J.B, Carvalho, L, Almo, S.C.
Deposit date:2018-02-26
Release date:2018-08-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:An essential bifunctional enzyme inMycobacterium tuberculosisfor itaconate dissimilation and leucine catabolism.
Proc.Natl.Acad.Sci.USA, 116, 2019
7AMT
DownloadVisualize
BU of 7amt by Molmil
Structure of LuxR with DNA (activation)
Descriptor: DNA (5'-D(P*AP*TP*AP*AP*TP*GP*AP*CP*AP*TP*TP*AP*CP*TP*GP*TP*AP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*AP*TP*AP*CP*AP*GP*TP*AP*AP*TP*GP*TP*CP*AP*TP*TP*AP*T)-3'), HTH-type transcriptional regulator LuxR
Authors:Liu, B, Reverter, D.
Deposit date:2020-10-09
Release date:2021-03-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding site profiles and N-terminal minor groove interactions of the master quorum-sensing regulator LuxR enable flexible control of gene activation and repression.
Nucleic Acids Res., 49, 2021
5A57
DownloadVisualize
BU of 5a57 by Molmil
The structure of GH101 from Streptococcus pneumoniae TIGR4 in complex with PUGT
Descriptor: (Z)-[(3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-ylidene]amino] N-phenylcarbamate, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Gregg, K.J, Suits, M.D.L, Deng, L, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-06-16
Release date:2015-09-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural Analysis of a Family 101 Glycoside Hydrolase in Complex with Carbohydrates Reveals Insights Into its Mechanism.
J.Biol.Chem., 290, 2015
3CVD
DownloadVisualize
BU of 3cvd by Molmil
Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization
Descriptor: COPPER (I) ION, Plastocyanin, ZINC ION
Authors:Crowley, P.B, Matias, P.M, Mi, H, Firbank, S.J, Banfield, M.J, Dennison, C.
Deposit date:2008-04-18
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Regulation of protein function: crystal packing interfaces and conformational dimerization.
Biochemistry, 47, 2008
5A6A
DownloadVisualize
BU of 5a6a by Molmil
GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with NGT
Descriptor: 1,2-ETHANEDIOL, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, N-ACETYL-BETA-D-GLUCOSAMINIDASE
Authors:Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
Deposit date:2015-06-24
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
7SV9
DownloadVisualize
BU of 7sv9 by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and TPP
Descriptor: L10 monobody, Multidrug transporter EmrE, TETRAPHENYLPHOSPHONIUM
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-18
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
7T00
DownloadVisualize
BU of 7t00 by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and benzyltrimethylammonium
Descriptor: L10 monobody, Multidrug transporter EmrE, benzyltrimethylammonium
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-29
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.91 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
1EL4
DownloadVisualize
BU of 1el4 by Molmil
STRUCTURE OF THE CALCIUM-REGULATED PHOTOPROTEIN OBELIN DETERMINED BY SULFUR SAS
Descriptor: C2-HYDROXY-COELENTERAZINE, CHLORIDE ION, OBELIN
Authors:Liu, Z.J, Vysotski, E.S, Rose, J, Lee, J, Wang, B.C.
Deposit date:2000-03-13
Release date:2001-03-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structure of the Ca2+-regulated photoprotein obelin at 1.7 A resolution determined directly from its sulfur substructure.
Protein Sci., 9, 2000
1EGV
DownloadVisualize
BU of 1egv by Molmil
CRYSTAL STRUCTURE OF THE DIOL DEHYDRATASE-ADENINYLPENTYLCOBALAMIN COMPLEX FROM KLEBSELLA OXYTOCA UNDER THE ILLUMINATED CONDITION.
Descriptor: CO-(ADENIN-9-YL-PENTYL)-COBALAMIN, POTASSIUM ION, PROPANEDIOL DEHYDRATASE, ...
Authors:Masuda, J, Shibata, N, Toraya, T, Morimoto, Y, Yasuoka, N.
Deposit date:2000-02-17
Release date:2001-02-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:How a protein generates a catalytic radical from coenzyme B(12): X-ray structure of a diol-dehydratase-adeninylpentylcobalamin complex.
Structure Fold.Des., 8, 2000
3VLW
DownloadVisualize
BU of 3vlw by Molmil
Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with mannuronate-guluronate disaccharide
Descriptor: AlgQ1, CALCIUM ION, GLYCEROL, ...
Authors:Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2011-12-05
Release date:2012-01-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter
Biochemistry, 51, 2012
7SSU
DownloadVisualize
BU of 7ssu by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and methyltriphenylphosphonium
Descriptor: L10 monobody, Multidrug transporter EmrE, methyltriphenylphosphonium
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-11
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
5IA1
DownloadVisualize
BU of 5ia1 by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with MLN8054
Descriptor: 1,2-ETHANEDIOL, 4-{[9-CHLORO-7-(2,6-DIFLUOROPHENYL)-5H-PYRIMIDO[5,4-D][2]BENZAZEPIN-2-YL]AMINO}BENZOIC ACID, Ephrin type-A receptor 2
Authors:Kudlinzki, D, Linhard, V.L, Gande, S.L, Sreeramulu, S, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
Deposit date:2016-02-21
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.036 Å)
Cite:Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.
ACS Chem. Biol., 11, 2016
4P2J
DownloadVisualize
BU of 4p2j by Molmil
Crystal structure of the mouse SNX19 PX domain with bound sulphate ion
Descriptor: MKIAA0254 protein, SULFATE ION
Authors:Collins, B.M.
Deposit date:2014-03-04
Release date:2014-09-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Different Phosphoinositide Specificities of the PX Domains of Sorting Nexins Regulating G-protein Signaling.
J.Biol.Chem., 289, 2014
7SZT
DownloadVisualize
BU of 7szt by Molmil
Crystal structure of Gdx-Clo from Small Multidrug Resistance family of transporters in low pH (protonated state)
Descriptor: Dodecyldimethylphosphine oxide, L10 monobody, Multidrug resistance protein, ...
Authors:Kermani, A.A, Stockbridge, R.B, Burata, O.E.
Deposit date:2021-11-29
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
3D0Q
DownloadVisualize
BU of 3d0q by Molmil
Crystal structure of calG3 from Micromonospora echinospora determined in space group I222
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Protein CalG3
Authors:Bitto, E, Singh, S, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N.
Deposit date:2008-05-02
Release date:2008-06-24
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Biochemical and structural insights of the early glycosylation steps in calicheamicin biosynthesis.
Chem.Biol., 15, 2008
7SQJ
DownloadVisualize
BU of 7sqj by Molmil
Cryo-EM structure of the seam subunits of the enteropathogenic E. coli O127:H6 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2021-11-05
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon