Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2QOJ
DownloadVisualize
BU of 2qoj by Molmil
Coevolution of a homing endonuclease and its host target sequence
Descriptor: I-AniI DNA target seq1, I-AniI DNA target seq2, LAGLIDADG endonuclease, ...
Authors:Scalley-Kim, M, McConnell Smith, A, Stoddard, B.L.
Deposit date:2007-07-20
Release date:2008-11-11
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Coevolution of a homing endonuclease and its host target sequence.
J.Mol.Biol., 372, 2007
3TGE
DownloadVisualize
BU of 3tge by Molmil
A novel series of potent and selective PDE5 inhibitor1
Descriptor: 7-(6-methoxypyridin-3-yl)-3-{[2-(morpholin-4-yl)ethyl]amino}-1-(2-propoxyethyl)pyrido[3,4-b]pyrazin-2(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Han, S.
Deposit date:2011-08-17
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Investigation of the pyrazinones as PDE5 inhibitors: Evaluation of regioisomeric projections into the solvent region.
Bioorg.Med.Chem.Lett., 21, 2011
1MXL
DownloadVisualize
BU of 1mxl by Molmil
STRUCTURE OF CARDIAC TROPONIN C-TROPONIN I COMPLEX
Descriptor: CALCIUM ION, PROTEIN (TROPONIN C), PROTEIN (TROPONIN I)
Authors:Li, M.X, Spyracopoulos, L, Sykes, B.D.
Deposit date:1999-04-22
Release date:1999-07-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Binding of cardiac troponin-I147-163 induces a structural opening in human cardiac troponin-C.
Biochemistry, 38, 1999
3Q8C
DownloadVisualize
BU of 3q8c by Molmil
Crystal structure of Protective Antigen W346F (pH 5.5)
Descriptor: CALCIUM ION, Protective antigen
Authors:Lovell, S, Battaile, K.P, Rajapaksha, M, Janowiak, B.E, Andra, K.K, Bann, J.G.
Deposit date:2011-01-06
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:pH effects on binding between the anthrax protective antigen and the host cellular receptor CMG2.
Protein Sci., 21, 2012
2L28
DownloadVisualize
BU of 2l28 by Molmil
Solution structure of lactobacillus casei dihydrofolate reductase apo-form, 25 conformers
Descriptor: Dihydrofolate reductase
Authors:Polshakov, V.I, Birdsall, B, Feeney, J.
Deposit date:2010-08-13
Release date:2011-04-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structures of Apo L. casei Dihydrofolate Reductase and Its Complexes with Trimethoprim and NADPH: Contributions to Positive Cooperative Binding from Ligand-Induced Refolding, Conformational Changes, and Interligand Hydrophobic Interactions.
Biochemistry, 50, 2011
2AM2
DownloadVisualize
BU of 2am2 by Molmil
sp protein ligand 2
Descriptor: 2-CHLORO-N-(3-CYANO-5,6-DIHYDRO-4H-CYCLOPENTA[B]THIOPHEN-2-YL)-5-DIETHYLSULFAMOYL-BENZAMIDE, UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
Authors:Longenecker, K.L, Stamper, G.F, Hajduk, P.J, Fry, E.H, Jakob, C.G, Harlan, J.E, Edalji, R, Bartley, D.M, Walter, K.A, Solomon, L.R.
Deposit date:2005-08-08
Release date:2006-01-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of MurF from Streptococcus pneumoniae co-crystallized with a small molecule inhibitor exhibits interdomain closure
Protein Sci., 14, 2005
3Q8A
DownloadVisualize
BU of 3q8a by Molmil
Crystal structure of WT Protective Antigen (pH 5.5)
Descriptor: CALCIUM ION, Protective antigen
Authors:Rajapaksha, M, Lovell, S, Janowiak, B.E, Andra, K.K, Battaile, K.P, Bann, J.G.
Deposit date:2011-01-06
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.129 Å)
Cite:pH effects on binding between the anthrax protective antigen and the host cellular receptor CMG2.
Protein Sci., 21, 2012
3QDH
DownloadVisualize
BU of 3qdh by Molmil
Crystal structure of Actinomyces fimbrial adhesin FimA
Descriptor: Fimbrial structural subunit, ZINC ION
Authors:Devarajan, B, Krishnan, V, Narayana, S.V.L.
Deposit date:2011-01-18
Release date:2011-08-24
Last modified:2011-09-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two autonomous structural modules in the fimbrial shaft adhesin FimA mediate Actinomyces interactions with streptococci and host cells during oral biofilm development.
Mol.Microbiol., 81, 2011
3Q8B
DownloadVisualize
BU of 3q8b by Molmil
Crystal structure of WT Protective Antigen (pH 9.0)
Descriptor: CALCIUM ION, Protective antigen
Authors:Lovell, S, Battaile, K.P, Rajapaksha, M, Janowiak, B.E, Andra, K.K, Bann, J.G.
Deposit date:2011-01-06
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:pH effects on binding between the anthrax protective antigen and the host cellular receptor CMG2.
Protein Sci., 21, 2012
1JBZ
DownloadVisualize
BU of 1jbz by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT HIGH PH
Descriptor: 1,2-ETHANEDIOL, GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:Hanson, G.T, McAnaney, T.B, Park, E.S, Rendell, M.E.P, Yarbrough, D.K, Chu, S, Xi, L, Boxer, S.G, Montrose, M.H, Remington, S.J.
Deposit date:2001-06-07
Release date:2003-01-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application.
Biochemistry, 41, 2002
1WT1
DownloadVisualize
BU of 1wt1 by Molmil
Mutant ABO(H) blood group glycosyltransferase with bound UDP and acceptor
Descriptor: Histo-blood group ABO system transferase, MERCURY (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Lee, H.J, Barry, C.H, Borisova, S.N, Seto, N.O.L, Zheng, R.B, Blancher, A, Evans, S.V, Palcic, M.M.
Deposit date:2004-11-12
Release date:2004-12-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the inactivity of human blood group o2 glycosyltransferase
J.Biol.Chem., 280, 2005
1AGL
DownloadVisualize
BU of 1agl by Molmil
STRUCTURE OF A DNA-BISDAUNOMYCIN COMPLEX
Descriptor: 4-METHYLBENZYL-N-BIS[DAUNOMYCIN], DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
Authors:Hu, G.G, Shui, X, Leng, F, Priebe, W, Chaires, J.B, Williams, L.D.
Deposit date:1997-03-25
Release date:1997-04-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a DNA-bisdaunomycin complex.
Biochemistry, 36, 1997
1WT2
DownloadVisualize
BU of 1wt2 by Molmil
Mutant human ABO(H) blood group glycosyltransferase A with bound UDP and inhibitor
Descriptor: Histo-blood group ABO system transferase, MERCURY (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Lee, H.J, Barry, C.H, Borisova, S.N, Seto, N.O.L, Zheng, R.B, Blancher, A, Evans, S.V, Palcic, M.M.
Deposit date:2004-11-12
Release date:2004-12-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the inactivity of human blood group o2 glycosyltransferase
J.Biol.Chem., 280, 2005
1X41
DownloadVisualize
BU of 1x41 by Molmil
Solution structure of the Myb-like DNA binding domain of human Transcriptional adaptor 2-like, isoform B
Descriptor: Transcriptional adaptor 2-like, isoform b
Authors:Sasagawa, A, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-12
Release date:2005-11-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Myb-like DNA binding domain of human Transcriptional adaptor 2-like, isoform B
To be Published
1DWU
DownloadVisualize
BU of 1dwu by Molmil
Ribosomal protein L1
Descriptor: RIBOSOMAL PROTEIN L1
Authors:Tishchenko, S.V, Nevskaya, N.A, Pavelyev, M.N, Nikonov, S.V, Garber, M.B, Piendl, W.
Deposit date:1999-12-13
Release date:2000-12-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Ribosomal Protein L1 from Methanococcus Thermolithotrophicus. Functionally Important Structural Invariants on the L1 Surface
Acta Crystallogr.,Sect.D, 58, 2002
1WSZ
DownloadVisualize
BU of 1wsz by Molmil
Mutant human ABO(H) blood group transferase A
Descriptor: Histo-blood group ABO system transferase, MERCURY (II) ION
Authors:Lee, H.J, Barry, C.H, Borisova, S.N, Seto, N.O.L, Zheng, R.B, Blancher, A, Evans, S.V, Palcic, M.M.
Deposit date:2004-11-12
Release date:2004-12-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis for the inactivity of human blood group o2 glycosyltransferase
J.Biol.Chem., 280, 2005
2B5Y
DownloadVisualize
BU of 2b5y by Molmil
Solution Structure of a Thioredoxin-like Protein in the Oxidized Form
Descriptor: YkuV protein
Authors:Zhang, X, Xia, B, Jin, C.
Deposit date:2005-09-29
Release date:2006-01-17
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:The bacillus subtilis YKUV is a thiol-disulfide oxidoreductase revealed by its redox structures and activity
J.Biol.Chem., 281, 2006
3ULQ
DownloadVisualize
BU of 3ulq by Molmil
Crystal Structure of the Anti-Activator RapF Complexed with the Response Regulator ComA DNA Binding Domain
Descriptor: MANGANESE (II) ION, Response regulator aspartate phosphatase F, Transcriptional regulatory protein ComA
Authors:Baker, M.D, Neiditch, M.B.
Deposit date:2011-11-11
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of response regulator inhibition by a bacterial anti-activator protein.
Plos Biol., 9, 2011
2P7C
DownloadVisualize
BU of 2p7c by Molmil
Solution structure of the bacillus licheniformis BlaI monomeric form in complex with the blaP half-operator.
Descriptor: Penicillinase repressor, Strand 1 of Twelve base-pair DNA, Strand 2 of Twelve base-pair DNA
Authors:Boudet, J, Duval, V, Van Melckebeke, H, Blackledge, M, Amoroso, A, Joris, B, Simorre, J.-P.
Deposit date:2007-03-20
Release date:2007-06-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational and thermodynamic changes of the repressor/DNA operator complex upon monomerization shed new light on regulation mechanisms of bacterial resistance against beta-lactam antibiotics.
Nucleic Acids Res., 35, 2007
2D0E
DownloadVisualize
BU of 2d0e by Molmil
Substrate assited in Oxygen Activation in Cytochrome P450 158A2
Descriptor: 2-HYDROXYNAPHTHOQUINONE, PROTOPORPHYRIN IX CONTAINING FE, putative cytochrome P450
Authors:Zhao, B, Waterman, M.R.
Deposit date:2005-08-02
Release date:2005-10-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Role of active site water molecules and substrate hydroxyl groups in oxygen activation by cytochrome P450 158A2: a new mechanism of proton transfer
J.Biol.Chem., 280, 2005
1WT3
DownloadVisualize
BU of 1wt3 by Molmil
Mutant human ABO(H) blood group glycosyltransferase with bound UDP and acceptor
Descriptor: Histo-blood group ABO system transferase, MERCURY (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Lee, H.J, Barry, C.H, Borisova, S.N, Seto, N.O.L, Zheng, R.B, Blancher, A, Evans, S.V, Palcic, M.M.
Deposit date:2004-11-12
Release date:2004-12-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the inactivity of human blood group o2 glycosyltransferase
J.Biol.Chem., 280, 2005
2DJ4
DownloadVisualize
BU of 2dj4 by Molmil
Solution structure of the 13th filamin domain from human Filamin-B
Descriptor: Filamin-B
Authors:Tomizawa, T, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-31
Release date:2006-10-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 13th filamin domain from human Filamin-B
To be Published
2DIC
DownloadVisualize
BU of 2dic by Molmil
Solution structure of the 12th filamin domain from human Filamin-B
Descriptor: Filamin-B
Authors:Tomizawa, T, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-29
Release date:2006-09-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 12th filamin domain from human Filamin-B
To be Published
2DMB
DownloadVisualize
BU of 2dmb by Molmil
Solution structure of the 15th Filamin domain from human Filamin-B
Descriptor: Filamin-B
Authors:Tomizawa, T, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2006-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 15th Filamin domain from human Filamin-B
To be Published
1ZA0
DownloadVisualize
BU of 1za0 by Molmil
X-ray structure of putative acyl-ACP desaturase DesA2 from Mycobacterium tuberculosis H37Rv
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)
Authors:Dyer, H.D, Lyle, K.S, Rayment, I, Fox, B.G.
Deposit date:2005-04-05
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of putative acyl-ACP desaturase DesA2 from Mycobacterium tuberculosis H37Rv.
Protein Sci., 14, 2005

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon