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2IBM
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BU of 2ibm by Molmil
A novel dimer interface and conformational changes revealed by an X-ray structure of B. subtilis SecA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Preprotein translocase secA subunit
Authors:Zimmer, J, Li, W, Rapoport, T.A.
Deposit date:2006-09-11
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A Novel Dimer Interface and Conformational Changes Revealed by an X-ray Structure of B. subtilis SecA.
J.Mol.Biol., 364, 2006
1SBB
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BU of 1sbb by Molmil
T-CELL RECEPTOR BETA CHAIN COMPLEXED WITH SUPERANTIGEN SEB
Descriptor: PROTEIN (14.3.D T CELL ANTIGEN RECEPTOR), PROTEIN (STAPHYLOCOCCAL ENTEROTOXIN B)
Authors:Li, H, Mariuzza, R.A.
Deposit date:1999-02-22
Release date:1999-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three-dimensional structure of the complex between a T cell receptor beta chain and the superantigen staphylococcal enterotoxin B.
Immunity, 9, 1998
1Q3P
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BU of 1q3p by Molmil
Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization
Descriptor: C-terminal hexapeptide from Guanylate kinase-associated protein, Shank1
Authors:Im, Y.J, Lee, J.H, Park, S.H, Park, S.J, Rho, S.-H, Kang, G.B, Kim, E, Eom, S.H.
Deposit date:2003-07-31
Release date:2004-01-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization
J.Biol.Chem., 278, 2003
3PJ3
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BU of 3pj3 by Molmil
Crystal structure of BTK kinase domain complexed with 2-Methyl-5-[(E)-(3-phenyl-acryloyl)amino]-N-(2-phenyl-3H-imidazo[4,5-b]pyridin-6-yl)-benzamide
Descriptor: 2-methyl-N-(2-phenyl-3H-imidazo[4,5-b]pyridin-6-yl)-5-{[(2E)-3-phenylprop-2-enoyl]amino}benzamide, Tyrosine-protein kinase BTK
Authors:Kuglstatter, A, Wong, A.
Deposit date:2010-11-08
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Insights into the conformational flexibility of Bruton's tyrosine kinase from multiple ligand complex structures.
Protein Sci., 20, 2011
4OEJ
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BU of 4oej by Molmil
Structure of membrane binding protein pleurotolysin B from Pleurotus ostreatus
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Dunstone, M.A, Caradoc-Davies, T.T, Whisstock, J.C, Law, R.H.P.
Deposit date:2014-01-13
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational Changes during Pore Formation by the Perforin-Related Protein Pleurotolysin.
Plos Biol., 13, 2015
3SGM
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BU of 3sgm by Molmil
Bromoderivative-2 of amyloid-related segment of alphaB-crystallin residues 90-100
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Method:X-RAY DIFFRACTION (1.7006 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
1XU2
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BU of 1xu2 by Molmil
The crystal structure of APRIL bound to BCMA
Descriptor: NICKEL (II) ION, Tumor necrosis factor ligand superfamily member 13, Tumor necrosis factor receptor superfamily member 17
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J.A, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-25
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding
J.Biol.Chem., 280, 2005
1XWR
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BU of 1xwr by Molmil
Crystal structure of the coliphage lambda transcription activator protein CII
Descriptor: ISOPROPYL ALCOHOL, Regulatory protein CII
Authors:Datta, A.B, Panjikar, S, Weiss, M.S, Chakrabarti, P, Parrack, P.
Deposit date:2004-11-02
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of {lambda} CII: Implications for recognition of direct-repeat DNA by an unusual tetrameric organization
Proc.Natl.Acad.Sci.USA, 102, 2005
4NRE
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BU of 4nre by Molmil
The structure of human 15-lipoxygenase-2 with a substrate mimic
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Arachidonate 15-lipoxygenase B, CALCIUM ION, ...
Authors:Kobe, M.J, Neau, D.B, Mitchell, C.E, Bartlett, S.G, Newcomer, M.E.
Deposit date:2013-11-26
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:The structure of human 15-lipoxygenase-2 with a substrate mimic.
J.Biol.Chem., 289, 2014
2L4V
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BU of 2l4v by Molmil
Three Dimensional Structure of Pineapple Cystatin
Descriptor: Cystatin
Authors:Chyan, C.C.L, Deli, I.I, Chen, B.B.J.
Deposit date:2010-10-15
Release date:2011-10-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Resonance assignments and secondary structure of a phytocystatin from Ananas comosus
Biomol.Nmr Assign., 6, 2012
3TW0
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BU of 3tw0 by Molmil
Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae
Descriptor: ACETATE ION, Cell wall surface anchor family protein, MAGNESIUM ION
Authors:Krishnan, V, Narayana, S.V.L.
Deposit date:2011-09-21
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Streptococcus agalactiae tip pilin GBS104: a model for GBS pili assembly and host interactions.
Acta Crystallogr.,Sect.D, 69, 2013
2O6S
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BU of 2o6s by Molmil
Structural diversity of the hagfish Variable Lymphocyte Receptors B59
Descriptor: Variable lymphocyte receptor B
Authors:Lee, J.O, Kim, H.M, Oh, S.C.
Deposit date:2006-12-08
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural diversity of the hagfish variable lymphocyte receptors
J.Biol.Chem., 282, 2007
5S4J
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BU of 5s4j by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with SF054
Descriptor: 6-chlorotetrazolo[1,5-b]pyridazine, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-02
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.124 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
1UN4
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BU of 1un4 by Molmil
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT T80A
Descriptor: ANGIOGENIN, CITRIC ACID
Authors:Holloway, D.E, Chavali, G.B, Acharya, K.R.
Deposit date:2003-09-04
Release date:2004-02-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic Studies on Structural Features that Determine the Enzymatic Specificity and Potency of Human Angiogenin: Thr44, Thr80 and Residues 38-41
Biochemistry, 43, 2004
5S1S
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BU of 5s1s by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with Z1613477500
Descriptor: 7,8-dihydro-5H-pyrano[4,3-b]pyridin-3-amine, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-02
Release date:2021-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
5S3S
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BU of 5s3s by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with POB0103
Descriptor: 1-[(5S,8R)-6,7,8,9-tetrahydro-5H-5,8-epiminocyclohepta[b]pyridin-10-yl]ethan-1-one, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-02
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.039 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
1BPI
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BU of 1bpi by Molmil
THE STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR AT 125K: DEFINITION OF CARBOXYL-TERMINAL RESIDUES GLYCINE-57 AND ALANINE-58
Descriptor: BOVINE PANCREATIC TRYPSIN INHIBITOR, PHOSPHATE ION
Authors:Parkin, S, Rupp, B, Hope, H.
Deposit date:1995-02-18
Release date:1995-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Structure of bovine pancreatic trypsin inhibitor at 125 K definition of carboxyl-terminal residues Gly57 and Ala58.
Acta Crystallogr.,Sect.D, 52, 1996
2LF1
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BU of 2lf1 by Molmil
Solution structure of L. casei dihydrofolate reductase complexed with NADPH, 30 structures
Descriptor: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Polshakov, V, Feeney, J, Birdsall, B, Kovalevskaya, N.
Deposit date:2011-06-28
Release date:2011-12-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structures of apo L. casei dihydrofolate reductase and its complexes with trimethoprim and NADPH: contributions to positive cooperative binding from ligand-induced refolding, conformational changes, and interligand hydrophobic interactions
Biochemistry, 50, 2011
3MWF
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BU of 3mwf by Molmil
Crystal structure of Staphylococcus aureus SirA complexed with staphyloferrin B
Descriptor: 5-[(2-{[(3S)-5-{[(2S)-2-amino-2-carboxyethyl]amino}-3-carboxy-3-hydroxy-5-oxopentanoyl]amino}ethyl)amino]-2,5-dioxopentanoic acid, FE (III) ION, Iron-regulated ABC transporter siderophore-binding protein SirA
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-05-05
Release date:2010-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Staphylococcus aureus SirA specificity for staphyloferrin B is driven by localized conformational change
To be Published
3Q6E
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BU of 3q6e by Molmil
Human insulin in complex with cucurbit[7]uril
Descriptor: Insulin A chain, Insulin B chain, cucurbit[7]uril
Authors:Chinai, J.M, Taylor, A.B, Hargreaves, N.D, Ryno, L.M, Morris, C.A, Hart, P.J, Urbach, A.R.
Deposit date:2010-12-31
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular recognition of insulin by a synthetic receptor.
J.Am.Chem.Soc., 133, 2011
1MI0
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BU of 1mi0 by Molmil
Crystal Structure of the redesigned protein G variant NuG2
Descriptor: immunoglobulin-binding protein G
Authors:Nauli, S, Kuhlman, B, Le Trong, I, Stenkamp, R.E, Teller, D.C, Baker, D.
Deposit date:2002-08-21
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2
Biochemistry, 11, 2002
3QD6
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BU of 3qd6 by Molmil
Crystal structure of the CD40 and CD154 (CD40L) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD40 ligand, Tumor necrosis factor receptor superfamily member 5
Authors:Lee, J.-O, Kim, Y.J, Song, D.H, Kim, H.M, Park, B.S.
Deposit date:2011-01-18
Release date:2011-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystallographic and mutational analysis of the CD40-CD154 complex and its implications for receptor activation
J.Biol.Chem., 286, 2011
2NZA
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BU of 2nza by Molmil
Structure and Function Studies of Cytochrome P450 158A1 from Streptomyces coelicolor A3(2)
Descriptor: Cytochrome P450 CYP158A1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Zhao, B, Waterman, M.R.
Deposit date:2006-11-22
Release date:2007-07-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Different binding modes of two flaviolin substrate molecules in cytochrome P450 158A1 (CYP158A1) compared to CYP158A2.
Biochemistry, 46, 2007
5S1O
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BU of 5s1o by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with STL414928
Descriptor: 2H-pyrazolo[3,4-b]pyridin-5-amine, DIMETHYL SULFOXIDE, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-02
Release date:2021-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
2K4K
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BU of 2k4k by Molmil
Solution structure of GSP13 from Bacillus subtilis
Descriptor: General stress protein 13
Authors:Yu, W, Yu, B, Hu, J, Jin, C, Xia, B.
Deposit date:2008-06-13
Release date:2009-05-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of GSP13 from Bacillus subtilis exhibits an S1 domain related to cold shock proteins.
J.Biomol.Nmr, 43, 2009

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