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152L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME Descriptor: SULFATE ION, T4 LYSOZYME Authors: Matsumura, M, Weaver, L.H, Matthews, B.W. Deposit date: 1994-01-26 Release date: 1994-05-31 Last modified: 2020-07-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994
4AJS	3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with isocitrate, magnesium(II), Adenosine 2',5'-biphosphate and ribosylnicotinamide-5'-phosphate Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, ISOCITRATE DEHYDROGENASE [NADP], ... Authors: Goncalves, S, Miller, S.P, Carrondo, M.A, Dean, A.M, Matias, P.M. Deposit date: 2012-02-17 Release date: 2012-10-31 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.802 Å) Cite: Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase. Biochemistry, 51, 2012
3P4Z	Time-dependent and Protein-directed In Situ Growth of Gold Nanoparticles in a Single Crystal of Lysozyme Descriptor: CHLORIDE ION, GOLD 3+ ION, GOLD ION, ... Authors: Wei, H, Wang, Z, Zhang, J, House, S, Gao, Y.-G, Yang, L, Robinson, H, Tan, L.H, Xing, H, Hou, C, Robertson, I.M, Zuo, J.-M, Lu, Y. Deposit date: 2010-10-07 Release date: 2011-02-09 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Time-dependent, protein-directed growth of gold nanoparticles within a single crystal of lysozyme. Nat Nanotechnol, 6, 2011
1H4J	Methylobacterium extorquens methanol dehydrogenase D303E mutant Descriptor: CALCIUM ION, Methanol dehydrogenase [cytochrome c] subunit 1, Methanol dehydrogenase [cytochrome c] subunit 2, ... Authors: Mohammed, F, Gill, R, Thompson, D, Cooper, J.B, Wood, S.P, Afolabi, P.R, Anthony, C. Deposit date: 2001-05-11 Release date: 2001-08-23 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (3 Å) Cite: Site-Directed Mutagenesis and X-Ray Crystallography of the Pqq-Containing Quinoprotein Methanol Dehydrogenase and its Electron Acceptor, Cytochrome C(L)(,) Biochemistry, 40, 2001
4GZP	N2 Neuraminidase of A/Tanzania/205/2010 H3N2 in complex with oseltamivir carboxylate Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhu, X, Wilson, I.A. Deposit date: 2012-09-06 Release date: 2012-10-17 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Influenza virus neuraminidases with reduced enzymatic activity that avidly bind sialic Acid receptors. J.Virol., 86, 2012
4GQI	Synthesis of novel MT3 receptor ligands via unusual Knoevenagel condensation Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, N-{(3R)-3-[2-(acetylamino)ethyl]-2-oxo-2,3-dihydro-1H-indol-5-yl}acetamide, ... Authors: Volkova, M.S, Jensen, K.C, Lozinskaya, N.A, Sosonyuk, S.E, Proskurnina, M.V, Mesecar, A.D, Zefirov, N.S. Deposit date: 2012-08-23 Release date: 2013-07-10 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.948 Å) Cite: Synthesis of novel МТ3 receptor ligands via an unusual Knoevenagel condensation. Bioorg.Med.Chem.Lett., 22, 2012
1H41	Pseudomonas cellulosa E292A alpha-D-glucuronidase mutant complexed with aldotriuronic acid Descriptor: 1,2-ETHANEDIOL, 4-O-methyl-alpha-D-glucopyranuronic acid, ALPHA-GLUCURONIDASE, ... Authors: Nurizzo, D, Nagy, T, Gilbert, H.J, Davies, G.J. Deposit date: 2002-09-25 Release date: 2003-05-01 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The Alpha-Glucuronidase,Glca67A,of Cellvibrio Japonicus Utilizes the Carboxylate and Methyl Groups of Aldobiouronic Acid as Important Substrate Recognition Determinants J.Biol.Chem., 278, 2003
1NTY	Crystal structure of the first DH/PH domain of Trio to 1.7 A Descriptor: Triple functional domain protein Authors: Skowronek, K.R, Zheng, Y, Nassar, N. Deposit date: 2003-01-30 Release date: 2004-06-29 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The C-terminal basic tail of RhoG assists the guanine nucleotide exchange factor trio in binding to phospholipids. J.Biol.Chem., 279, 2004
3P6W	Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC3-Etg-Boc Descriptor: Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE Authors: Lee, Y.-T, Wilson, R.F, Glazer, E.C, Goodin, D.B. Deposit date: 2010-10-11 Release date: 2010-11-17 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC3-Etg-Boc To be Published
1A63	THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES Descriptor: RHO Authors: Briercheck, D.M, Wood, T.C, Allison, T.J, Richardson, J.P, Rule, G.S. Deposit date: 1998-03-05 Release date: 1998-05-27 Last modified: 2024-04-10 Method: SOLUTION NMR Cite: The NMR structure of the RNA binding domain of E. coli rho factor suggests possible RNA-protein interactions. Nat.Struct.Biol., 5, 1998
1H8V	The X-ray Crystal Structure of the Trichoderma reesei Family 12 Endoglucanase 3, Cel12A, at 1.9 A Resolution Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDO-BETA-1,4-GLUCANASE Authors: Sandgren, M, Shaw, A, Ropp, T.H, Wu, S, Bott, R, Cameron, A.D, Stahlberg, J, Mitchinson, C, Jones, T.A. Deposit date: 2001-02-16 Release date: 2001-04-24 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The X-Ray Crystal Structure of the Trichoderma Reesei Family 12 Endoglucanase 3, Cel12A, at 1.9 A Resolution J.Mol.Biol., 308, 2001
1T88	Crystal Structure of the Ferrous Cytochrome P450cam (C334A) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Cytochrome P450-cam, ... Authors: Nagano, S, Tosha, T, Ishimori, K, Morishima, I, Poulos, T.L. Deposit date: 2004-05-11 Release date: 2004-05-25 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the cytochrome p450cam mutant that exhibits the same spectral perturbations induced by putidaredoxin binding. J.Biol.Chem., 279, 2004
6V13	immune receptor complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fibrinogen beta 74cit69-81, G08 TCR alpha chain, ... Authors: Lim, J.J, Rossjohn, J. Deposit date: 2019-11-19 Release date: 2020-11-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.75 Å) Cite: The shared susceptibility epitope of HLA-DR4 binds citrullinated self-antigens and the TCR. Sci Immunol, 6, 2021
7WMZ	Crystal structure of methylenetetrahydrofolate reductase MSMEG_6649 from Mycobacterium smegmatis with NADH Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate reductase Authors: Lin, W, Wang, W. Deposit date: 2022-01-17 Release date: 2023-01-25 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.916 Å) Cite: Structural and functional characterization of a mycobacterial methylenetetrahydrofolate reductase utilizing NADH as the exclusive cofactor. Biochem.J., 480, 2023
1SWZ	Use of an ion-binding site to bypass the 1000-atom limit to ab initio structure determination by direct methods Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme, ... Authors: Mooers, B.H.M, Matthews, B.W. Deposit date: 2004-03-30 Release date: 2005-01-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.06 Å) Cite: Use of an ion-binding site to bypass the 1000-atom limit to structure determination by direct methods. Acta Crystallogr.,Sect.D, 60, 2004
178L	Protein flexibility and adaptability seen in 25 crystal forms of T4 LYSOZYME Descriptor: CHLORIDE ION, T4 LYSOZYME Authors: Matsumura, M, Weaver, L, Zhang, X.-J, Matthews, B.W. Deposit date: 1995-03-24 Release date: 1995-07-10 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2.71 Å) Cite: Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme. J.Mol.Biol., 250, 1995
185L	SPECIFICITY OF LIGAND BINDING IN A BURIED NON-POLAR CAVITY OF T4 LYSOZYME: LINKAGE OF DYNAMICS AND STRUCTURAL PLASTICITY Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, INDOLE, ... Authors: Morton, A, Matthews, B.W. Deposit date: 1995-04-19 Release date: 1995-07-10 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Specificity of ligand binding in a buried nonpolar cavity of T4 lysozyme: linkage of dynamics and structural plasticity. Biochemistry, 34, 1995
3APG	Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus Descriptor: Beta-glucosidase, GLYCEROL Authors: Kado, Y, Inoue, T, Ishikawa, K. Deposit date: 2010-10-15 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus TO BE PUBLISHED
198L	THERMODYNAMIC AND STRUCTURAL COMPENSATION IN "SIZE-SWITCH" CORE-REPACKING VARIANTS OF T4 LYSOZYME Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME Authors: Baldwin, E, Xu, J, Hajiseyedjavadi, O, Matthews, B.W. Deposit date: 1995-11-06 Release date: 1996-03-08 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Thermodynamic and structural compensation in "size-switch" core repacking variants of bacteriophage T4 lysozyme. J.Mol.Biol., 259, 1996
1NX0	Structure of Calpain Domain 6 in Complex with Calpastatin DIC Descriptor: CALCIUM ION, Calcium-dependent protease, small subunit, ... Authors: Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L. Deposit date: 2003-02-07 Release date: 2003-08-19 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor. J.Mol.Biol., 328, 2003
1JMT	X-ray Structure of a Core U2AF65/U2AF35 Heterodimer Descriptor: HEXANE-1,6-DIOL, SPLICING FACTOR U2AF 35 KDA SUBUNIT, SPLICING FACTOR U2AF 65 KDA SUBUNIT Authors: Kielkopf, C.L, Rodionova, N.A, Green, M.R, Burley, S.K. Deposit date: 2001-07-19 Release date: 2001-09-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: A novel peptide recognition mode revealed by the X-ray structure of a core U2AF35/U2AF65 heterodimer. Cell(Cambridge,Mass.), 106, 2001
4GVG	Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-hexosaminidase Authors: Bacik, J.P, Mark, B.L. Deposit date: 2012-08-30 Release date: 2012-12-19 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Active Site Plasticity within the Glycoside Hydrolase NagZ Underlies a Dynamic Mechanism of Substrate Distortion. Chem.Biol., 19, 2012
1TBY	DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME Descriptor: HUMAN LYSOZYME Authors: Harata, K, Muraki, M, Jigami, Y. Deposit date: 1992-08-06 Release date: 1993-01-15 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme. Biochemistry, 31, 1992
4A34	Crystal structure of the fucose mutarotase in complex with L-fucose from Streptococcus pneumoniae Descriptor: POTASSIUM ION, RBSD/FUCU TRANSPORT PROTEIN FAMILY PROTEIN, beta-L-fucopyranose Authors: Higgins, M.A, Boraston, A.B. Deposit date: 2011-09-29 Release date: 2011-10-12 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of the Fucose Mutarotase from Streptococcus Pneumoniae in Complex with L-Fucose Acta Crystallogr.,Sect.F, 67, 2011
4AMW	CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride Descriptor: 5-fluoro-alpha-L-idopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ... Authors: Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W. Deposit date: 2012-03-14 Release date: 2013-03-27 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism. J.Biol.Chem., 288, 2013

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