Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7W39
DownloadVisualize
BU of 7w39 by Molmil
Structure of USP14-bound human 26S proteasome in state EA2.1_UBL
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7E9A
DownloadVisualize
BU of 7e9a by Molmil
Crystal structure of KPC-2 in complex with (S)-2-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acrylic acid (4a-(S))
Descriptor: 2-[(3S)-1-oxidanyl-3H-2,1-benzoxaborol-3-yl]prop-2-enoic acid, ACETIC ACID, Beta-lactamase, ...
Authors:Li, G.-B, Yan, Y.-H.
Deposit date:2021-03-03
Release date:2021-08-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Design and enantioselective synthesis of 3-( alpha-acrylic acid) benzoxaboroles to combat carbapenemase resistance.
Chem.Commun.(Camb.), 57, 2021
4MBZ
DownloadVisualize
BU of 4mbz by Molmil
Structure of B-Lymphotropic Polyomavirus VP1 in complex with 3'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Khan, Z.M, Neu, U, Stehle, T.
Deposit date:2013-08-21
Release date:2013-12-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands.
Plos Pathog., 9, 2013
5SVL
DownloadVisualize
BU of 5svl by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel in the ATP-bound, closed (desensitized) state
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
Deposit date:2016-08-06
Release date:2016-10-05
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
1ASU
DownloadVisualize
BU of 1asu by Molmil
AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 2% PEG 400, 2M AMMONIUM SULFATE, HEPES PH 7.5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AVIAN SARCOMA VIRUS INTEGRASE
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-08-25
Release date:1995-11-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-resolution structure of the catalytic domain of avian sarcoma virus integrase.
J.Mol.Biol., 253, 1995
1WBV
DownloadVisualize
BU of 1wbv by Molmil
Identification of novel p38 alpha MAP Kinase inhibitors using fragment-based lead generation.
Descriptor: 3-FLUORO-N-1H-INDOL-5-YL-5-MORPHOLIN-4-YLBENZAMIDE, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Tickle, J, Cleasby, A, Devine, L.A, Jhoti, H.
Deposit date:2004-11-05
Release date:2005-11-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of Novel P38Alpha Map Kinase Inhibitors Using Fragment-Based Lead Generation.
J.Med.Chem., 48, 2005
3B1N
DownloadVisualize
BU of 3b1n by Molmil
Structure of Burkholderia thailandensis nucleoside kinase (BthNK) in complex with ADP-mizoribine
Descriptor: 5-hydroxy-1-(beta-D-ribofuranosyl)-1H-imidazole-4-carboxamide, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Yasutake, Y, Ota, H, Hino, E, Sakasegawa, S, Tamura, T.
Deposit date:2011-07-05
Release date:2011-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of Burkholderia thailandensis nucleoside kinase: implications for the catalytic mechanism and nucleoside selectivity
Acta Crystallogr.,Sect.D, 67, 2011
1NVS
DownloadVisualize
BU of 1nvs by Molmil
The Complex Structure Of Checkpoint Kinase Chk1/SB218078
Descriptor: Peptide ASVSA, REL-(9R,12S)-9,10,11,12-TETRAHYDRO-9,12-EPOXY-1H-DIINDOLO[1,2,3-FG:3',2',1'-KL]PYRROLO[3,4-I][1,6]BENZODIAZOCINE-1,3(2H)-DIONE, SULFATE ION, ...
Authors:Zhao, B, Bower, M.J, McDevitt, P.J, Zhao, H, Davis, S.T, Johanson, K.O, Green, S.M, Concha, N.O, Zhou, B.B.
Deposit date:2003-02-04
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Chk1 Inhibition by UCN-01
J.Biol.Chem., 277, 2002
3QWP
DownloadVisualize
BU of 3qwp by Molmil
Crystal structure of SET and MYND domain containing 3; Zinc finger MYND domain-containing protein 1
Descriptor: GLYCEROL, S-ADENOSYLMETHIONINE, SET and MYND domain-containing protein 3, ...
Authors:Dong, A, Dombrovski, L, Li, Y, Wernimont, A, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2011-02-28
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Crystal Structure of human Histone-lysine N-methyltransferase SMYD3
To be Published
6TZB
DownloadVisualize
BU of 6tzb by Molmil
Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin in complex with 6'-SLNLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:Wu, N.C, Wilson, I.A.
Deposit date:2019-08-12
Release date:2019-10-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.243 Å)
Cite:Major antigenic site B of human influenza H3N2 viruses has an evolving local fitness landscape.
Nat Commun, 11, 2020
4DU0
DownloadVisualize
BU of 4du0 by Molmil
Crystal structure of human alpha-defensin 1, HNP1 (G17A mutant)
Descriptor: CHLORIDE ION, GLYCEROL, Neutrophil defensin 1
Authors:Wu, X, Lu, W, Pazgier, M.
Deposit date:2012-02-21
Release date:2012-04-11
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Invariant gly residue is important for alpha-defensin folding, dimerization, and function: a case study of the human neutrophil alpha-defensin HNP1
J.Biol.Chem., 287, 2012
1ZJB
DownloadVisualize
BU of 1zjb by Molmil
Crystal structure of the trehalulose synthase MutB from Pseudomonas mesoacidophila MX-45 (monoclinic form)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Trehalulose synthase
Authors:Ravaud, S, Robert, X, Haser, R, Aghajari, N.
Deposit date:2005-04-28
Release date:2006-10-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Expression, purification, crystallization and preliminary X-ray crystallographic studies of the trehalulose synthase MutB from Pseudomonas mesoacidophila MX-45.
Acta Crystallogr.,Sect.F, 61, 2005
2PYZ
DownloadVisualize
BU of 2pyz by Molmil
Crystal structure of the complex of proteinase K with auramine at 1.8A resolution
Descriptor: 4,4'-(AMINOMETHYLENE)BIS(N,N-DIMETHYLANILINE), CALCIUM ION, NITRATE ION, ...
Authors:Singh, A.K, Singh, N, Sinha, M, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2007-05-17
Release date:2007-07-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of the complex of Proteinase K with auramine at 1.8A resolution
To be Published
1ZKO
DownloadVisualize
BU of 1zko by Molmil
Crystal structure of Glycine cleavage system H protein (tm0212) from Thermotoga maritima at 1.65 A resolution
Descriptor: Glycine cleavage system H protein, SODIUM ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-05-03
Release date:2005-05-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Glycine cleavage system H protein (tm0212) from Thermotoga maritima at 1.65 A resolution
To be published
3C1U
DownloadVisualize
BU of 3c1u by Molmil
D192N mutant of Rhamnogalacturonan acetylesterase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Rhamnogalacturonan acetylesterase
Authors:Langkilde, A, Lo Leggio, L, Navarro Poulsen, J.C, Molgaard, A, Larsen, S.
Deposit date:2008-01-24
Release date:2008-08-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Short strong hydrogen bonds in proteins: a case study of rhamnogalacturonan acetylesterase
ACTA CRYSTALLOGR.,SECT.D, 64, 2008
4I85
DownloadVisualize
BU of 4i85 by Molmil
Crystal structure of transthyretin in complex with CHF5074 at neutral pH
Descriptor: 1-(3',4'-dichloro-2-fluorobiphenyl-4-yl)cyclopropanecarboxylic acid, Transthyretin
Authors:Zanotti, G, Cendron, L, Folli, C, Florio, P, Imbimbo, B.P, Berni, R.
Deposit date:2012-12-03
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural evidence for native state stabilization of a conformationally labile amyloidogenic transthyretin variant by fibrillogenesis inhibitors.
Febs Lett., 587, 2013
1SA5
DownloadVisualize
BU of 1sa5 by Molmil
Rat protein farnesyltransferase complexed with FPP and BMS-214662
Descriptor: 3-BENZYL-1-(1H-IMIDAZOL-4-YLMETHYL)-4-(THIEN-2-YLSULFONYL)-2,3,4,5-TETRAHYDRO-1H-1,4-BENZODIAZEPINE-7-CARBONITRILE, ACETIC ACID, FARNESYL DIPHOSPHATE, ...
Authors:Reid, T.S, Beese, L.S.
Deposit date:2004-02-06
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of the Anticancer Clinical Candidates R115777 (Tipifarnib) and BMS-214662 Complexed with Protein Farnesyltransferase Suggest a Mechanism of FTI Selectivity.
Biochemistry, 43, 2004
1S1D
DownloadVisualize
BU of 1s1d by Molmil
Structure and protein design of human apyrase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CALCIUM ION, ...
Authors:Dai, J, Liu, J, Deng, Y, Smith, T.M, Lu, M.
Deposit date:2004-01-06
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and protein design of a human platelet function inhibitor.
Cell(Cambridge,Mass.), 116, 2004
8DVD
DownloadVisualize
BU of 8dvd by Molmil
Cryo-EM structure of SIVmac239 SOS-2P Env trimer in complex with human bNAb PGT145
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2022-07-28
Release date:2022-11-16
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Cryo-EM structures of prefusion SIV envelope trimer.
Nat.Struct.Mol.Biol., 29, 2022
1YVN
DownloadVisualize
BU of 1yvn by Molmil
THE YEAST ACTIN VAL 159 ASN MUTANT COMPLEX WITH HUMAN GELSOLIN SEGMENT 1.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Vorobiev, S.M, Belmont, L.D, Drubin, D.G, Almo, S.C.
Deposit date:1999-03-23
Release date:2000-03-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of yeast actin V159N mutant
To be Published
1TR0
DownloadVisualize
BU of 1tr0 by Molmil
Crystal Structure of a boiling stable protein SP1
Descriptor: GLYCEROL, stable protein 1
Authors:Almog, O, Gonzalez, A, Sofer, O, Dgany, O, Shoseyov, O.
Deposit date:2004-06-18
Release date:2004-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structural basis of the thermostability of SP1, a novel plant (Populus tremula) boiling stable protein
J.Biol.Chem., 279, 2004
3BNZ
DownloadVisualize
BU of 3bnz by Molmil
Crystal structure of Thymidylate Synthase ternary complex with dUMP and 8A inhibitor
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 4-(4-methyl-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)benzonitrile, PHOSPHATE ION, ...
Authors:Leone, R, Cancian, L, Luciani, R, Ferrari, S, Costi, M.P, Mangani, S.
Deposit date:2007-12-15
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of the binding modes of N-phenylphthalimides inhibiting bacterial thymidylate synthase through X-ray crystallography screening
J.Med.Chem., 54, 2011
3QK1
DownloadVisualize
BU of 3qk1 by Molmil
Crystal Structure of Enterokinase-like Trypsin Variant
Descriptor: 1,2-ETHANEDIOL, BENZAMIDINE, CALCIUM ION, ...
Authors:Schoepfel, M, Tziridis, A, Arnold, U, Stubbs, M.T.
Deposit date:2011-01-31
Release date:2011-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Towards a restriction proteinase: construction of a self-activating enzyme.
Chembiochem, 12, 2011
4IBZ
DownloadVisualize
BU of 4ibz by Molmil
Human p53 core domain with hot spot mutation R273C and second-site suppressor mutation T284R
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cellular tumor antigen p53, ...
Authors:Eldar, A, Rozenberg, H, Diskin-Posner, Y, Shakked, Z.
Deposit date:2012-12-09
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions.
Nucleic Acids Res., 41, 2013
4IF6
DownloadVisualize
BU of 4if6 by Molmil
Structure of NAD-dependent protein deacetylase sirtuin-1 (closed state, 2.25 A)
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, NAD-dependent protein deacetylase sirtuin-1, ZINC ION
Authors:Davenport, A.M, Huber, F.M, Hoelz, A.
Deposit date:2012-12-14
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of a nucleoporin complex
To be Published

245663

數據於2025-12-03公開中

PDB statisticsPDBj update infoContact PDBjnumon