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1BPS
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BU of 1bps by Molmil
MINOR CONFORMER OF A BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA IN DUPLEX DNA
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, DNA (5'-D(*CP*TP*CP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*CP*(BAP)AP*CP*GP*AP*G)-3')
Authors:Schwartz, J.S, Rice, J.S, Luxon, B.A, Sayer, J.M, Xie, G, Yeh, H.J.C, Liu, X, Jerina, D.M, Gorenstein, D.G.
Deposit date:1998-08-06
Release date:1998-08-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the minor conformer of a DNA duplex containing a dG mismatch opposite a benzo[a]pyrene diol epoxide/dA adduct: glycosidic rotation from syn to anti at the modified deoxyadenosine.
Biochemistry, 36, 1997
5NQ3
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BU of 5nq3 by Molmil
'Porcine (Sus scrofa) Major Histocompatibility Complex, class I, with human beta2 micro globulin, presenting EFEDLTFLA
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLU-PHE-GLU-ASP-LEU-THR-PHE-LEU-ALA, ...
Authors:Rizkallah, P.J, Tungatt, K, Sewell, A.K.
Deposit date:2017-04-19
Release date:2018-04-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Plos Pathog., 14, 2018
7Z3X
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BU of 7z3x by Molmil
Crystal structure of FIR RRM1-2 Y115F mutant bound to FUSE ssDNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*T)-3'), DNA (5'-D(P*GP*TP*())-3'), ...
Authors:Ni, X, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-03-02
Release date:2022-11-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of FIR RRM1-2 Y115F mutant bound to FUSE ssDNA
To Be Published
9F15
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BU of 9f15 by Molmil
Carbonic anhydrase II variant with bound iron complex
Descriptor: 4,4,7,10,10-pentamethyl-3,6,8,11-tetrakis(oxidanylidene)-N-[2-(4-sulfamoylphenyl)ethyl]-2,5,7,9,12-pentazabicyclo[11.4.0]heptadeca-1(13),14,16-triene-15-carboxamide containing iron, ACETATE ION, Carbonic anhydrase 2, ...
Authors:Zhang, K, Jakob, R.P, Ward, T.R.
Deposit date:2024-04-18
Release date:2025-03-05
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Directed Evolution of an Artificial Hydroxylase Based on a Thermostable Human Carbonic Anhydrase Protein
Acs Catalysis, 14, 2024
6DLY
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BU of 6dly by Molmil
Crystal structure of DNA polymerase III subunit beta from Mycobacterium marinum in complex with a natural product
Descriptor: 1,2-ETHANEDIOL, Beta sliding clamp, Natural product peptide
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-06-04
Release date:2019-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of DNA polymerase III subunit beta from Mycobacterium marinum in complex with a natural product
to be published
6I77
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BU of 6i77 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative-4
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[4-azanyl-2,3,5,6-tetrakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
9IOK
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BU of 9iok by Molmil
Crystal Structure of Sortase E from Thermobifida fusca
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Peptidase C60, ...
Authors:Sharma, V, Murmu, S, Megta, A, Roy, R.P, Krishnan, V.
Deposit date:2024-07-09
Release date:2025-07-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure Analysis of Sortase E from Thermobifida fusca
To Be Published
7VUB
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BU of 7vub by Molmil
Phloem lectin (PP2) complex with Nitrobenzene
Descriptor: 1,2-ETHANEDIOL, NITROBENZENE, Phloem lectin
Authors:Sivaji, N, Bobbili, K.B, Suguna, K, Surolia, A.
Deposit date:2021-11-02
Release date:2023-03-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure and interactions of the phloem lectin (phloem protein 2) Cus17 from Cucumis sativus.
Structure, 31, 2023
6IJL
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BU of 6ijl by Molmil
Crystal structure of SmyD3 in complex with covalent inhibitor 5
Descriptor: Histone-lysine N-methyltransferase SMYD3, S-ADENOSYLMETHIONINE, ZINC ION, ...
Authors:Baburajendran, N, Joy, J.
Deposit date:2018-10-10
Release date:2019-08-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:Discovery of Irreversible Inhibitors Targeting Histone Methyltransferase, SMYD3.
Acs Med.Chem.Lett., 10, 2019
5NIM
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BU of 5nim by Molmil
EthR complex
Descriptor: HTH-type transcriptional regulator EthR, SULFATE ION, [1-(2-hydroxyethyl)pyrrolo[3,4-c]pyrazol-5-yl]-(5-propyl-1,2-oxazol-3-yl)methanone
Authors:Pohl, E, Tatum, N.J, Cole, J.C, Baulard, A.R.
Deposit date:2017-03-24
Release date:2017-11-15
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New active leads for tuberculosis booster drugs by structure-based drug discovery.
Org. Biomol. Chem., 15, 2017
5YRD
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BU of 5yrd by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
9ISG
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BU of 9isg by Molmil
Structure of rat TRPV1 in complex with PSFL426-S5
Descriptor: 4-azanyl-3-sulfanylidene-1,2,4-triazine-5,6-dione, Transient receptor potential cation channel subfamily V member 1
Authors:Chen, X, Yu, Y.
Deposit date:2024-07-17
Release date:2025-07-23
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of capsaicin entry into buried vanilloid sites in TRPV1.
Nat.Chem.Biol., 2025
5NJ0
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BU of 5nj0 by Molmil
EthR complex
Descriptor: HTH-type transcriptional regulator EthR, SULFATE ION, ~{N}-[(2~{R})-2-(4-nitrophenyl)-2-oxidanyl-ethyl]-1,3-benzodioxole-5-carboxamide
Authors:Pohl, E, Tatum, N.J, Cole, J.C, Baulard, A.R.
Deposit date:2017-03-27
Release date:2017-11-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:New active leads for tuberculosis booster drugs by structure-based drug discovery.
Org. Biomol. Chem., 15, 2017
5NJ9
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BU of 5nj9 by Molmil
E. coli Microcin-processing metalloprotease TldD/E with DRVY angiotensin fragment bound
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ASP-ARG-VAL-TYR, ...
Authors:Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
Deposit date:2017-03-28
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
4U8L
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BU of 4u8l by Molmil
Structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant N207A
Descriptor: 1,2-ETHANEDIOL, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Qureshi, I.A, Chaudhary, R, Tanner, J.J.
Deposit date:2014-08-03
Release date:2014-12-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Contributions of Unique Active Site Residues of Eukaryotic UDP-Galactopyranose Mutases to Substrate Recognition and Active Site Dynamics.
Biochemistry, 53, 2014
7ZWN
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BU of 7zwn by Molmil
Crystal structure of human BCL6 BTB domain in complex with a WVIP peptide
Descriptor: 1,2-ETHANEDIOL, ALA-TRP-VAL-ILE-PRO-ALA, B-cell lymphoma 6 protein, ...
Authors:Shetty, K, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
6FR5
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BU of 6fr5 by Molmil
HA1.7 TCR Study of CDR Loop Flexibility
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-15
Release date:2018-04-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
6I3U
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BU of 6i3u by Molmil
Optimization of potent and selective ATM inhibitors suitable for a proof-of-concept study in Huntington's disease models
Descriptor: 2-morpholin-4-yl-6-[7-[(2~{R})-1-morpholin-4-ylpropan-2-yl]oxy-9~{H}-thioxanthen-4-yl]pyran-4-one, Phosphatidylinositol 3-kinase catalytic subunit type 3
Authors:Leonard, P.M.
Deposit date:2018-11-07
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Optimization of Potent and Selective Ataxia Telangiectasia-Mutated Inhibitors Suitable for a Proof-of-Concept Study in Huntington's Disease Models.
J.Med.Chem., 62, 2019
9F8H
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BU of 9f8h by Molmil
Crystal Structure of PhzA/B from Burkholderia cepacia R18194 in complex with Raloxifene
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Phenazine biosynthesis protein A/B, ...
Authors:Diederich, C, Zimmermann, M, Thiemann, M, Kunick, C, Blankenfeldt, W.
Deposit date:2024-05-06
Release date:2025-04-16
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:From Bones to Bugs: Structure-Based Development of Raloxifene-Derived Pathoblockers That Inhibit Pyocyanin Production in Pseudomonas aeruginosa.
J.Med.Chem., 68, 2025
6I55
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BU of 6i55 by Molmil
Plasmodium falciparum dihydroorotate dehydrogenase (DHODH) co-crystallized with N-(2,2-Diphenylethyl)-4-hydroxy-1,2,5-thiadiazole-3-carboxamide
Descriptor: Dihydroorotate dehydrogenase, FLAVIN MONONUCLEOTIDE, N-(2,2-Diphenylethyl)-4-hydroxy-1,2,5-thiadiazole-3-carboxamide, ...
Authors:Goyal, P, Sainas, S, Pippione, A.C, Boschi, D, Al-Kadaraghi, S.
Deposit date:2018-11-12
Release date:2018-12-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Hydroxyazole scaffold-based Plasmodium falciparum dihydroorotate dehydrogenase inhibitors: Synthesis, biological evaluation and X-ray structural studies.
Eur J Med Chem, 163, 2018
7VNT
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BU of 7vnt by Molmil
Structure of aminotransferase-substrate complex
Descriptor: 1,2-ETHANEDIOL, 454aa long hypothetical 4-aminobutyrate aminotransferase, GLYCEROL, ...
Authors:Sakuraba, H, Ohshida, T, Ohshima, T.
Deposit date:2021-10-12
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of a novel type of ornithine delta-aminotransferase from the hyperthermophilic archaeon Pyrococcus horikoshii.
Int.J.Biol.Macromol., 208, 2022
7VTF
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BU of 7vtf by Molmil
cytidine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, Pseudouridine kinase
Authors:Kim, S.H, Rhee, S.
Deposit date:2021-10-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.20203447 Å)
Cite:Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
168L
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BU of 168l by Molmil
PROTEIN FLEXIBILITY AND ADAPTABILITY SEEN IN 25 CRYSTAL FORMS OF T4 LYSOZYME
Descriptor: T4 LYSOZYME
Authors:Zhang, X.-J, Matthews, B.W.
Deposit date:1995-03-24
Release date:1995-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme.
J.Mol.Biol., 250, 1995
5NQ0
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BU of 5nq0 by Molmil
Porcine (Sus scrofa) Major Histocompatibility Complex, class I, presenting DFEREGYSL
Descriptor: 1,2-ETHANEDIOL, ASP-PHE-GLU-ARG-GLU-GLY-TYR-SER-LEU, Beta-2-microglobulin, ...
Authors:Rizkallah, P.J, Tungatt, K, Sewell, A.K.
Deposit date:2017-04-19
Release date:2018-04-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Plos Pathog., 14, 2018
9MXN
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BU of 9mxn by Molmil
Pseudomonas fluorescens isocyanide hydratase, pH=6.5
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Isonitrile hydratase InhA
Authors:Smith, N, Prososki, K, Wilson, M.A.
Deposit date:2025-01-20
Release date:2025-10-29
Last modified:2025-11-05
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Combining Reactive Quantum-Mechanical Molecular-Dynamics Simulations with Mutagenesis, Crystallography, and Enzyme Kinetics to Reveal Plausible Steps of Isocyanide Hydratase Catalysis.
J.Chem.Inf.Model., 65, 2025

244693

數據於2025-11-12公開中

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