PDB: 47902 resultsInfo pagesStatus searchChemie searchBIRD

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5GZ7	Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... Authors: Tiwari, P, Pandey, S.N, Kaur, P, Sharma, S, Singh, T.P. Deposit date: 2016-09-26 Release date: 2016-10-26 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution. To Be Published
5VO2	DLK in complex with inhibitor 5-(1-isopropyl-5-(1-(oxetan-3-yl)piperidin-4-yl)-1H-pyrazol-3-yl)-3-(trifluoromethyl)pyridin-2-amine (compound 7) Descriptor: 5-{5-[1-(oxetan-3-yl)piperidin-4-yl]-1-(propan-2-yl)-1H-pyrazol-3-yl}-3-(trifluoromethyl)pyridin-2-amine, Mitogen-activated protein kinase kinase kinase 12 Authors: HARRIS, S.F, YIN, J. Deposit date: 2017-05-01 Release date: 2017-10-04 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.96 Å) Cite: Selective Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12) with Activity in a Model of Alzheimer's Disease. J. Med. Chem., 60, 2017
3JAB	Domain organization and conformational plasticity of the G protein effector, PDE6 Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, GafA domain of cone phosphodiesterase 6C, GafB domain of phosphodiesterase 2A, ... Authors: Zhang, Z, He, F, Constantine, R, Baker, M.L, Baehr, W, Schmid, M.F, Wensel, T.G, Agosto, M.A. Deposit date: 2015-05-26 Release date: 2015-06-10 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (11 Å) Cite: Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6. J.Biol.Chem., 290, 2015
2P1W	structure of the phosphothreonine lyase SpvC, the effector protein from Salmonella Descriptor: 27.5 kDa virulence protein Authors: Zhu, Y, Wang, D.C, Shao, F. Deposit date: 2007-03-06 Release date: 2007-12-11 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural insights into the enzymatic mechanism of the pathogenic MAPK phosphothreonine lyase. Mol.Cell, 28, 2007
3KJH	Zn-bound state of CooC1 Descriptor: CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC, ZINC ION Authors: Jeoung, J.-H, Dobbek, H. Deposit date: 2009-11-03 Release date: 2010-01-19 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of the ATP-Dependent Maturation Factor of Ni,Fe-Containing Carbon Monoxide Dehydrogenases J.Mol.Biol., 396, 2010
5VL6	Peptide 38138 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoite (Pf-CelTOS) Descriptor: Peptide 38138 Authors: Bermudez, A, Patarroyo, M.E. Deposit date: 2017-04-25 Release date: 2018-09-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Peptide 38138 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoite (Pf-CelTOS) To Be Published
1NNS	L-asparaginase of E. coli in C2 space group and 1.95 A resolution Descriptor: ASPARTIC ACID, L-asparaginase II Authors: Sanches, M, Barbosa, J.A.R.G, de Oliveira, R.T, Neto, J.A.A, Polikarpov, I. Deposit date: 2003-01-14 Release date: 2003-03-11 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural comparison of Escherichia coli L-asparaginase in two monoclinic space groups. Acta Crystallogr.,Sect.D, 59, 2003
5FTN	Cryo-EM structure of human p97 bound to ATPgS (Conformation III) Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE Authors: Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S. Deposit date: 2016-01-14 Release date: 2016-01-27 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: 2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition Science, 351, 2016
5FOX	HUMANISED MONOMERIC RADA IN COMPLEX WITH FHAA TETRAPEPTIDE Descriptor: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHAA PEPTIDE, GLYCEROL, ... Authors: Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. Deposit date: 2015-11-26 Release date: 2016-03-30 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
3KHB	Crystal structure of Escherichia coli AlkB with Co(II) and 2-OG Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, COBALT (II) ION Authors: Hollis, T, Holland, P.J. Deposit date: 2009-10-30 Release date: 2010-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching. Plos One, 5, 2010
5FP3	Cell penetrant inhibitors of the JMJD2 (KDM4) and JARID1 (KDM5) families of histone lysine demethylases Descriptor: 3-(4-phenylbutanoylamino)pyridine-4-carboxylic acid, BICINE, COBALT (II) ION, ... Authors: Chung, C. Deposit date: 2015-11-27 Release date: 2016-01-27 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Cell Penetrant Inhibitors of the Kdm4 and Kdm5 Families of Histone Lysine Demethylases. 1. 3-Amino-4-Pyridine Carboxylate Derivatives. J.Med.Chem., 59, 2016
5FWR	Breaking down the wall: mutation of the tyrosine gate of the universal Escherichia coli fimbrial adhesin FimH Descriptor: FimH, biphenyl-4-yl alpha-D-mannopyranoside Authors: Bouckaert, J. Deposit date: 2016-02-21 Release date: 2016-11-30 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Mutation of Tyr137 of the universal Escherichia coli fimbrial adhesin FimH relaxes the tyrosine gate prior to mannose binding. IUCrJ, 4, 2017
3AUJ	Structure of diol dehydratase complexed with glycerol Descriptor: CALCIUM ION, COBALAMIN, Diol dehydrase alpha subunit, ... Authors: Yamanishi, M, Kinoshita, K, Fukuoka, M, Shibata, T, Tobimatsu, T, Toraya, T. Deposit date: 2011-02-07 Release date: 2012-02-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Redesign of coenzyme B(12) dependent diol dehydratase to be resistant to the mechanism-based inactivation by glycerol and act on longer chain 1,2-diols Febs J., 279, 2012
3KIC	Crystal structure of adeno-associated virus serotype 3B Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein VP1 Authors: Lerch, T.F, Xie, Q, Chapman, M.S. Deposit date: 2009-11-01 Release date: 2010-04-28 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.603 Å) Cite: The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion. Virology, 403, 2010
5FIR	Crystal structure of C. elegans XRN2 in complex with the XRN2-binding domain of PAXT-1 Descriptor: 5'-3' EXORIBONUCLEASE 2 HOMOLOG, PAXT-1, SULFATE ION Authors: Richter, H, Katic, I, Gut, H, Grosshans, H. Deposit date: 2015-10-02 Release date: 2016-01-20 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.836 Å) Cite: Structural Basis and Function of Xrn2-Binding by Xtb Domains Nat.Struct.Mol.Biol., 23, 2016
5FMT	CrIFT54 CH-domain Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FLAGELLAR ASSOCIATED PROTEIN, GLYCEROL, ... Authors: Weber, K, Lorentzen, E. Deposit date: 2015-11-09 Release date: 2016-03-09 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.878 Å) Cite: Intraflagellar Transport Proteins 172, 80, 57, 54, 38, and 20 Form a Stable Tubulin-Binding Ift-B2 Complex. Embo J., 35, 2016
2P6T	CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR NMB0573 and L-LEUCINE COMPLEX FROM NEISSERIA MENINGITIDIS Descriptor: CALCIUM ION, GLYCEROL, LEUCINE, ... Authors: Ren, J, Sainsbury, S, Owens, R.J, Oxford Protein Production Facility (OPPF) Deposit date: 2007-03-19 Release date: 2007-04-03 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The Structure and Transcriptional Analysis of a Global Regulator from Neisseria meningitidis. J.Biol.Chem., 282, 2007
5FK3	SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CC Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ... Authors: Huang, L, Lilley, D.M.J. Deposit date: 2015-10-14 Release date: 2016-05-25 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.5 Å) Cite: A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016
3KES	Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae in the Hexagonal, P61 space group Descriptor: 1,2-ETHANEDIOL, Nucleoporin NUP145 Authors: Sampathkumar, P, Ozyurt, S.A, Do, J, Bain, K, Dickey, M, Gheyi, T, Sali, A, Kim, S.J, Phillips, J, Pieper, U, Fernandez-Martinez, J, Franke, J.D, Atwell, S, Thompson, D.A, Emtage, J.S, Wasserman, S, Rout, M, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2009-10-26 Release date: 2009-12-22 Last modified: 2021-02-10 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145. Proteins, 78, 2010
5V5S	multi-drug efflux; membrane transport; RND superfamily; Drug resistance Descriptor: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC Authors: wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D. Deposit date: 2017-03-15 Release date: 2017-04-19 Last modified: 2019-10-23 Method: ELECTRON MICROSCOPY (6.5 Å) Cite: An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump. Elife, 6, 2017
1NYB	SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX Descriptor: BoxB RNA, Probable regulatory protein N Authors: Cilley, C.D, Williamson, J.R. Deposit date: 2003-02-12 Release date: 2003-06-24 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural mimicry in the phage phi21 N peptide-boxB RNA complex RNA, 9, 2003
5UJU	Crystal structure of NAD-dependent aldehyde dehydrogenase from Burkholderia multivorans Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, NAD-dependent aldehyde dehydrogenase, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2017-01-19 Release date: 2017-04-12 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Crystal structure of NAD-dependent aldehyde dehydrogenase from Burkholderia multivorans TO BE PUBLISHED
3KUM	Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583 complexed with Mg and dipeptide L-Arg-L-Tyr Descriptor: ARGININE, Dipeptide Epimerase, MAGNESIUM ION, ... Authors: Fedorov, A.A, Fedorov, E.V, Sakai, A, Gerlt, J.A, Almo, S.C. Deposit date: 2009-11-27 Release date: 2010-10-13 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily. Proc.Natl.Acad.Sci.USA, 109, 2012
5UKD	PH INFLUENCES FLUORIDE COORDINATION NUMBER OF THE ALFX PHOSPHORYL TRANSFER TRANSITION STATE ANALOG Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CYTIDINE-5'-MONOPHOSPHATE, ... Authors: Schlichting, I, Reinstein, J. Deposit date: 1999-04-18 Release date: 1999-08-14 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: pH influences fluoride coordination number of the AlFx phosphoryl transfer transition state analog. Nat.Struct.Biol., 6, 1999
3KFU	Crystal structure of the transamidosome Descriptor: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit C, ... Authors: Blaise, M, Bailly, M, Frechin, M, Thirup, S, Becker, H.D, Kern, D. Deposit date: 2009-10-28 Release date: 2010-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structure of a transfer-ribonucleoprotein particle that promotes asparagine formation. Embo J., 29, 2010

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