PDB: 225399 resultsInfo pagesStatus searchChemie searchBIRD

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1OAP	Mad structure of the periplasmique domain of the Escherichia coli PAL protein Descriptor: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN, SULFATE ION Authors: Abergel, C, Walburger, A, Bouveret, E, Claverie, J.M. Deposit date: 2003-01-20 Release date: 2004-02-13 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Crystallization and preliminary crystallographic study of the peptidoglycan-associated lipoprotein from Escherichia coli. Acta Crystallogr.,Sect.D, 57, 2001
4P8R	Structure of a glycosomal glyceraldehyde 3-phosphate dehydrogenase from Trypanosoma brucei Descriptor: Glyceraldehyde 3-phosphate dehydrogenase, cytosolic, MAGNESIUM ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2014-03-31 Release date: 2014-06-18 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of a glycosomal glyceraldehyde 3-phosphate dehydrogenase from Trypanosoma brucei to be published
1NV1	Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6-Phosphate, Phosphate and Thallium (5 mM) Descriptor: 6-O-phosphono-beta-D-fructofuranose, Fructose-1,6-bisphosphatase, MAGNESIUM ION, ... Authors: Choe, J, Iancu, C.V, Fromm, H.J, Honzatko, R.B. Deposit date: 2003-02-01 Release date: 2003-07-08 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Interaction of Tl+ with product complexes of fructose-1,6-bisphosphatase J.BIOL.CHEM., 278, 2003
4PAZ	OXIDIZED MUTANT P80A PSEUDOAZURIN FROM A. FAECALIS Descriptor: COPPER (II) ION, PSEUDOAZURIN Authors: Adman, E.T, Libeu, C.A.P. Deposit date: 1997-02-20 Release date: 1997-08-20 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Site-directed mutants of pseudoazurin: explanation of increased redox potentials from X-ray structures and from calculation of redox potential differences. Biochemistry, 36, 1997
1OAV	OMEGA-AGATOXIN IVA Descriptor: OMEGA-AGATOXIN IVA Authors: Kim, J.I, Konishi, S, Iwai, H, Kohno, T, Gouda, H, Shimada, I, Sato, K, Arata, Y. Deposit date: 1995-06-28 Release date: 1995-10-15 Last modified: 2017-11-29 Method: SOLUTION NMR Cite: Three-dimensional solution structure of the calcium channel antagonist omega-agatoxin IVA: consensus molecular folding of calcium channel blockers. J.Mol.Biol., 250, 1995
4PB2	Structure of vcCNT-7C8C bound to 5-fluorouridine Descriptor: 5-FLUOROURIDINE, DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, ... Authors: Johnson, Z.L, Lee, S.-Y. Deposit date: 2014-04-11 Release date: 2014-08-13 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.302 Å) Cite: Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters. Elife, 3, 2014
1NVD	Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and carbaphosphonate Descriptor: 3-DEHYDROQUINATE SYNTHASE, CHLORIDE ION, ZINC ION, ... Authors: Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K. Deposit date: 2003-02-03 Release date: 2003-03-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.51 Å) Cite: Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase J.MOL.BIOL., 327, 2003
1OAZ	IgE Fv SPE7 complexed with a recombinant thioredoxin Descriptor: IMMUNOGLOBULIN E, THIOREDOXIN 1 Authors: James, L.C, Roversi, P, Tawfik, D. Deposit date: 2003-01-21 Release date: 2004-01-15 Last modified: 2013-10-30 Method: X-RAY DIFFRACTION (2.78 Å) Cite: Antibody Multispecificity Mediated by Conformational Diversity Science, 299, 2003
4P9M	Crystal structure of 8ANC195 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 Fab heavy chain, 8ANC195 light chain Authors: Scharf, L, Bjorkman, P.J. Deposit date: 2014-04-04 Release date: 2014-05-21 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Antibody 8ANC195 Reveals a Site of Broad Vulnerability on the HIV-1 Envelope Spike. Cell Rep, 7, 2014
4PBB	The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI Descriptor: SULFATE ION, Uncharacterized protein AbaSI Authors: Horton, J.R, Cheng, X. Deposit date: 2014-04-11 Release date: 2014-06-25 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (3.46 Å) Cite: Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA. Nucleic Acids Res., 42, 2014
1OBI	Crystal structure of the G130A mutant of Malonamidase E2 from Bradyrhizobium japonicum Descriptor: MALONAMIDASE E2 Authors: Shin, S, Oh, B.-H. Deposit date: 2003-01-31 Release date: 2003-12-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Characterization of a Novel Ser-Cisser-Lys Catalytic Triad in Comparison with the Classical Ser-His-Asp Triad J.Biol.Chem., 278, 2003
4P9V	Grb2 SH2 complexed with a pTyr-Ac6cN-Asn tripeptide Descriptor: CHLORIDE ION, Growth factor receptor-bound protein 2, PHQ-PTR-02K-ASN-NH2 Authors: Clements, J.H, Martin, S.F. Deposit date: 2014-04-06 Release date: 2014-06-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.64 Å) Cite: Protein-ligand interactions: Probing the energetics of a putative cation-pi interaction. Bioorg.Med.Chem.Lett., 24, 2014
1NVY	Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4 Descriptor: STRONTIUM ION, d(TCGGTACCGA)4 Authors: Cardin, C.J, Thorpe, J.H, Gale, B.C, Teixeira, S.C.M. Deposit date: 2003-02-05 Release date: 2003-02-25 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Strontium, a MAD taerget for the DNA Holliday junction To be published
4P1Z	Structure of the MID domain from MIWI Descriptor: Piwi-like protein 1 Authors: Cora, E, McCarthy, A.A, Pillai, R.S. Deposit date: 2014-02-28 Release date: 2014-05-07 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The MID-PIWI module of Piwi proteins specifies nucleotide- and strand-biases of piRNAs. Rna, 20, 2014
1NW3	Structure of the Catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase Descriptor: ACETATE ION, S-ADENOSYLMETHIONINE, SULFATE ION, ... Authors: Min, J.R, Feng, Q, Li, Z.H, Zhang, Y, Xu, R.M. Deposit date: 2003-02-05 Release date: 2003-03-25 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of the Catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase Cell(Cambridge,Mass.), 112, 2003
4PBQ	CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM HAEMOPHILUS INFLUENZAE RdAW (HICG_00826, TARGET EFI-510123) WITH BOUND L-GULONATE Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, L-gulonate, ... Authors: Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) Deposit date: 2014-04-13 Release date: 2014-05-07 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry, 54, 2015
1NWE	Ptp1B R47C Modified at C47 with N-[4-(2-{2-[3-(2-Bromo-acetylamino)-propionylamino]-3-hydroxy-propionylamino}-ethyl)-phenyl]-oxalamic acid Descriptor: N-[4-(2-{2-[3-(2-BROMO-ACETYLAMINO)-PROPIONYLAMINO]-3-HYDROXY-PROPIONYLAMINO}-ETHYL)-PHENYL]-OXALAMIC ACID, Protein-tyrosine phosphatase, non-receptor type 1 Authors: Erlanson, D.A, McDowell, R.S, He, M.M, Randal, M, Simmons, R.L, Kung, J, Waight, A, Hansen, S.K. Deposit date: 2003-02-06 Release date: 2003-05-06 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Discovery of a New Phosphotyrosine Mimetic for PTP1B Using Breakaway Tethering J.Am.Chem.Soc., 125, 2003
4P29	Crystal structure of the LpoA N-terminal domain from Haemophilus influenzae Descriptor: CHLORIDE ION, GLYCEROL, LpoA, ... Authors: Vijayalakshmi, J, Saper, M.A. Deposit date: 2014-03-02 Release date: 2015-03-04 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.95006478 Å) Cite: Structural analyses of theHaemophilus influenzaepeptidoglycan synthase activator LpoA suggest multiple conformations in solution. J.Biol.Chem., 292, 2017
6MPA	Crystal structure of BlMan5B in complex with GlcNAc (soaking) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BlMan5B, CITRATE ANION Authors: Lorizolla-Cordeiro, R, Giuseppe, P.O, Murakami, M.T. Deposit date: 2018-10-05 Release date: 2019-01-30 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase. J. Mol. Biol., 431, 2019
1OC6	structure native of the D405N mutant of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS at 1.5 angstrom resolution Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CELLOBIOHYDROLASE II, ... Authors: Varrot, A, Frandsen, T.P, Von Ossowski, I, Boyer, V, Driguez, H, Schulein, M, Davies, G.J. Deposit date: 2003-02-06 Release date: 2003-07-10 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural Basis for Ligand Binding and Processivity in Cellobiohydrolase Cel6A from Humicola Insolens Structure, 11, 2003
1NWS	Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitobiose Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1 Authors: Fusetti, F, Pijning, T, Kalk, K.H, Dijkstra, B.W. Deposit date: 2003-02-06 Release date: 2003-08-26 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structure and carbohydrate-binding properties of the human cartilage glycoprotein-39 J.Biol.Chem., 278, 2003
4PCA	X-ray crystal structure of an O-methyltransferase from Anaplasma phagocytophilum bound to SAH and Manganese Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, O-methyltransferase family protein, ... Authors: Fairman, J.W, Abendroth, J, Lorimer, D, Edwards, T.E, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2014-04-14 Release date: 2014-06-18 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.5 Å) Cite: An O-Methyltransferase Is Required for Infection of Tick Cells by Anaplasma phagocytophilum. Plos Pathog., 11, 2015
4PCO	Crystal structure of double-stranded RNA with four terminal GU wobble base pairs Descriptor: CHLORIDE ION, COBALT HEXAMMINE(III), RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') Authors: Mooers, B.H.M. Deposit date: 2014-04-15 Release date: 2015-10-14 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.32 Å) Cite: Structures and Energetics of Four Adjacent GU Pairs That Stabilize an RNA Helix. J.Phys.Chem.B, 119, 2015
1NXH	X-RAY STRUCTURE: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT87 Descriptor: MTH396 protein Authors: Khayat, R, Savchenko, A, Edwards, A, Arowsmith, C, Tong, L, Northeast Structural Genomics Consortium (NESG) Deposit date: 2003-02-10 Release date: 2004-02-24 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2.8 Å) Cite: X-RAY STRUCTURE OF MTH396 To be Published
4P2J	Crystal structure of the mouse SNX19 PX domain with bound sulphate ion Descriptor: MKIAA0254 protein, SULFATE ION Authors: Collins, B.M. Deposit date: 2014-03-04 Release date: 2014-09-03 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural Basis for Different Phosphoinositide Specificities of the PX Domains of Sorting Nexins Regulating G-protein Signaling. J.Biol.Chem., 289, 2014

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