Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3I16
DownloadVisualize
BU of 3i16 by Molmil
Crystal structure of carbon-sulfur lyase involved in aluminum resistance (YP_878183.1) from Clostridium novyi NT at 2.00 A resolution
Descriptor: 1,2-ETHANEDIOL, Aluminum resistance protein, L(+)-TARTARIC ACID, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-25
Release date:2009-07-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of carbon-sulfur lyase involved in aluminum resistance (YP_878183.1) from Clostridium novyi NT at 2.00 A resolution
To be published
3HRE
DownloadVisualize
BU of 3hre by Molmil
X-ray crystallographic structure of CTX-M-9 S70G
Descriptor: CTX-M-9 extended-spectrum beta-lactamase, PHOSPHATE ION
Authors:Delmas, J, Leyssene, D, Dubois, D, Vazeille, E, Robin, F, Bonnet, R.
Deposit date:2009-06-09
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into substrate recognition and product expulsion in CTX-M enzymes.
J.Mol.Biol., 400, 2010
3I30
DownloadVisualize
BU of 3i30 by Molmil
Proteinase K by Classical hanging drop Method after high X-Ray dose on ID14-2 Beamline at ESRF
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Ravelli, R, McSweeney, S, Nicolini, C.
Deposit date:2009-06-30
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.992 Å)
Cite:Atomic structure and radiation resistance of Langmuir-Blodgett protein crystals
To be Published
3HRU
DownloadVisualize
BU of 3hru by Molmil
Crystal Structure of ScaR with bound Zn2+
Descriptor: Metalloregulator ScaR, SULFATE ION, ZINC ION
Authors:Stoll, K.E, Draper, W.E, Kliegman, J.I, Golynskiy, M.V, Brew-Appiah, R.A.T, Brown, H.K, Breyer, W.A, Jakubovics, N.S, Jenkinson, H.F, Brennan, R.B, Cohen, S.M, Glasfeld, A.
Deposit date:2009-06-09
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Characterization and structure of the manganese-responsive transcriptional regulator ScaR.
Biochemistry, 48, 2009
3HSA
DownloadVisualize
BU of 3hsa by Molmil
Crystal structure of pleckstrin homology domain (YP_926556.1) from SHEWANELLA AMAZONENSIS SB2B at 1.99 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, pleckstrin homology domain
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-10
Release date:2009-06-23
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3HSG
DownloadVisualize
BU of 3hsg by Molmil
Crystal structure of E. coli HPPK(Y53A) in complex with MgAMPCPP
Descriptor: ACETATE ION, CHLORIDE ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
Authors:Blaszczyk, J, Li, Y, Yan, H, Ji, X.
Deposit date:2009-06-10
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
3I4O
DownloadVisualize
BU of 3i4o by Molmil
Crystal Structure of Translation Initiation Factor 1 from Mycobacterium tuberculosis
Descriptor: Translation initiation factor IF-1
Authors:Hatzopoulos, G.N, Mueller-Dieckmann, J.
Deposit date:2009-07-02
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure of translation initiation factor 1 from Mycobacterium tuberculosis and inferred binding to the 30S ribosomal subunit.
Febs Lett., 584, 2010
3I50
DownloadVisualize
BU of 3i50 by Molmil
Crystal structure of the West Nile Virus envelope glycoprotein in complex with the E53 antibody Fab
Descriptor: Envelope glycoprotein, murine heavy chain (IgG3) of E53 monoclonal antibody Fab, murine kappa light chain of E53 monoclonal antibody Fab
Authors:Nybakken, G.E, Warren, J.T, Chen, B.R, Nelson, C.A, Fremont, D.H.
Deposit date:2009-07-03
Release date:2009-10-27
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the preferential recognition of immature flaviviruses by a fusion-loop antibody.
Embo J., 28, 2009
3HU9
DownloadVisualize
BU of 3hu9 by Molmil
Nitrosobenzene in complex with T4 lysozyme L99A/M102Q
Descriptor: Lysozyme, NITROSOBENZENE, PHOSPHATE ION
Authors:Boyce, S.E, Mobley, D.L, Rocklin, G.J, Graves, A.P, Dill, K.A, Shoichet, B.K.
Deposit date:2009-06-13
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site.
J.Mol.Biol., 394, 2009
3HXW
DownloadVisualize
BU of 3hxw by Molmil
Crystal Structure of catalytic fragment of E. coli AlaRS in complex with SerSA
Descriptor: 2-HYDROXYETHYL DISULFIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, ...
Authors:Guo, M, Yang, X.-L, Schimmel, P.
Deposit date:2009-06-22
Release date:2009-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma.
Nature, 462, 2009
3HYB
DownloadVisualize
BU of 3hyb by Molmil
Crystal structure of RbcX from Anabaena, crystal form II
Descriptor: RbcX protein, SULFATE ION
Authors:Bracher, A, Liu, C.
Deposit date:2009-06-22
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Coupled chaperone action in folding and assembly of hexadecameric Rubisco.
Nature, 463, 2010
3I6P
DownloadVisualize
BU of 3i6p by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutM
Descriptor: Ethanolamine utilization protein eutM, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-07
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3HYN
DownloadVisualize
BU of 3hyn by Molmil
Crystal structure of a putative signal transduction protein (eubrec_0645) from eubacterium rectale atcc 33656 at 1.20 A resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Putative signal transduction protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-22
Release date:2009-07-21
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of Putative signal transduction protein (YP_002936568.1) from Eubacterium rectale at 1.20 A resolution
To be published
3I02
DownloadVisualize
BU of 3i02 by Molmil
Crystal structure of S54-10 antibody in complex with antigen Kdo(2.4)Kdo(2.4)Kdo
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, Immunoglobulin heavy chain, Immunoglobulin light chain
Authors:Brooks, C.L, Muller-Loennies, S, Borisova, S.N, Brade, L, Kosma, P, Hirama, T, MacKenzie, C.R, Brade, H, Evans, S.V.
Deposit date:2009-06-24
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Antibodies raised against chlamydial lipopolysaccharide antigens reveal convergence in germline gene usage and differential epitope recognition
Biochemistry, 49, 2010
3I11
DownloadVisualize
BU of 3i11 by Molmil
Cobalt-substituted metallo-beta-lactamase from Bacillus cereus
Descriptor: Beta-lactamase 2, COBALT (II) ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3HPI
DownloadVisualize
BU of 3hpi by Molmil
Crystal structure of maltose-binding protein mutant with bound sucrose
Descriptor: ACETATE ION, Maltose-binding periplasmic protein, ZINC ION, ...
Authors:Gould, A.D, Shilton, B.H.
Deposit date:2009-06-04
Release date:2010-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Studies of the maltose transport system reveal a mechanism for coupling ATP hydrolysis to substrate translocation without direct recognition of substrate.
J.Biol.Chem., 285, 2010
3I3M
DownloadVisualize
BU of 3i3m by Molmil
Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate and methylated trinucleotide T-meC-T
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, DNA (5'-D(P*TP*(ME6)P*T)-3'), ...
Authors:Yu, B, Hunt, J.F.
Deposit date:2009-06-30
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enzymological and structural studies of the mechanism of promiscuous substrate recognition by the oxidative DNA repair enzyme AlkB.
Proc.Natl.Acad.Sci.USA, 106, 2009
3I5D
DownloadVisualize
BU of 3i5d by Molmil
Crystal structure of the ATP-gated P2X4 ion channel in the closed, apo state at 3.5 Angstroms (R3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, P2X purinoceptor
Authors:Kawate, T, Michel, J.C, Gouaux, E.
Deposit date:2009-07-05
Release date:2009-08-04
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:Crystal structure of the ATP-gated P2X(4) ion channel in the closed state.
Nature, 460, 2009
3HQU
DownloadVisualize
BU of 3hqu by Molmil
PHD2:Fe:UN9:partial HIF1-alpha substrate complex
Descriptor: Egl nine homolog 1, FE (II) ION, Hypoxia-inducible factor 1 alpha, ...
Authors:Chowdhury, R, McDonough, M.A, Schofield, C.J.
Deposit date:2009-06-08
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for binding of hypoxia-inducible factor to the oxygen-sensing prolyl hydroxylases
Structure, 17, 2009
3HRV
DownloadVisualize
BU of 3hrv by Molmil
Crystal structure of TcpA, a Type IV pilin from Vibrio cholerae El Tor biotype
Descriptor: GLYCEROL, SULFATE ION, Toxin coregulated pilin
Authors:Craig, L, Arvai, A.S, Tainer, J.A.
Deposit date:2009-06-09
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Vibrio cholerae El Tor TcpA crystal structure and mechanism for pilus-mediated microcolony formation.
Mol.Microbiol., 77, 2010
3HS8
DownloadVisualize
BU of 3hs8 by Molmil
Intersectin 1-peptide-AP2 alpha ear complex
Descriptor: Adaptor protein complex AP-2, alpha 2 subunit, peptide from Intersectin-1, ...
Authors:Vahedi-Faridi, A, Pechstein, A, Schaefer, J.G, Saenger, W, Haucke, V.
Deposit date:2009-06-10
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Regulation of synaptic vesicle recycling by complex formation between intersectin 1 and the clathrin adaptor complex AP2.
Proc.Natl.Acad.Sci.USA, 107, 2010
3HN6
DownloadVisualize
BU of 3hn6 by Molmil
Crystal structure of glucosamine-6-phosphate deaminase from Borrelia burgdorferi
Descriptor: Glucosamine-6-phosphate deaminase, PYROPHOSPHATE 2-
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-05-29
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Glucosamine-6-phosphate deaminase from Borrelia burgdorferi
To be Published
3HSJ
DownloadVisualize
BU of 3hsj by Molmil
Crystal structure of E. coli HPPK(N55A)
Descriptor: ACETATE ION, GLYCEROL, HPPK
Authors:Blaszczyk, J, Li, Y, Yan, H, Ji, X.
Deposit date:2009-06-10
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
3HP4
DownloadVisualize
BU of 3hp4 by Molmil
Crystal structure of psychrotrophic esterase EstA from Pseudoalteromonas sp. 643A inhibited by monoethylphosphonate
Descriptor: GDSL-esterase
Authors:Brzuszkiewicz, A, Nowak, E, Dauter, Z, Dauter, M, Cieslinski, H, Kur, J.
Deposit date:2009-06-03
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of EstA esterase from psychrotrophic Pseudoalteromonas sp. 643A covalently inhibited by monoethylphosphonate.
Acta Crystallogr.,Sect.F, 65, 2009
3HT9
DownloadVisualize
BU of 3ht9 by Molmil
2-methoxyphenol in complex with T4 lysozyme L99A/M102Q
Descriptor: BETA-MERCAPTOETHANOL, Guaiacol, Lysozyme, ...
Authors:Boyce, S.E, Mobley, D.L, Rocklin, G.J, Graves, A.P, Dill, K.A, Shoichet, B.K.
Deposit date:2009-06-11
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site.
J.Mol.Biol., 394, 2009

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon