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3J0J	Fitted atomic models of Thermus thermophilus V-ATPase subunits into cryo-EM map Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ... Authors: Lau, W.C.Y, Rubinstein, J.L. Deposit date: 2011-08-24 Release date: 2011-12-14 Last modified: 2024-11-20 Method: ELECTRON MICROSCOPY (9.7 Å) Cite: Subnanometre-resolution structure of the intact Thermus thermophilus H+-driven ATP synthase. Nature, 481, 2012
3W3A	Crystal structure of V1-ATPase at 3.9 angstrom resolution Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ... Authors: Nagamatsu, Y, Takeda, K, Kuranaga, T, Numoto, N, Miki, K. Deposit date: 2012-12-14 Release date: 2013-05-15 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.9 Å) Cite: Origin of Asymmetry at the Intersubunit Interfaces of V1-ATPase from Thermusthermophilus J.Mol.Biol., 425, 2013
3A5C	Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ... Authors: Numoto, N, Hasegawa, Y, Takeda, K, Miki, K. Deposit date: 2009-08-06 Release date: 2009-10-13 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (4.51 Å) Cite: Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase Embo Rep., 10, 2009
3A5D	Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase Descriptor: V-type ATP synthase alpha chain, V-type ATP synthase beta chain, V-type ATP synthase subunit D, ... Authors: Numoto, N, Hasegawa, Y, Takeda, K, Miki, K. Deposit date: 2009-08-06 Release date: 2009-10-13 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (4.8 Å) Cite: Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase Embo Rep., 10, 2009
2D00	Subunit F of V-type ATPase/synthase Descriptor: CALCIUM ION, V-type ATP synthase subunit F Authors: Makyio, H, Iino, R, Ikeda, C, Imamura, H, Tamakoshi, M, Iwata, M, Stock, D, Bernal, R.A, Carpenter, E.P, Yoshida, M, Yokoyama, K, Iwata, S. Deposit date: 2005-07-21 Release date: 2005-12-06 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of a central stalk subunit F of prokaryotic V-type ATPase/synthase from Thermus thermophilus Embo J., 24, 2005
6HH0	Yeast V-ATPase transmembrane helix 7 NMR structure in DPC micelles Descriptor: V-type proton ATPase subunit a, vacuolar isoform Authors: Zangger, K, Hohlweg, W, Wagner, G. Deposit date: 2018-08-24 Release date: 2018-09-12 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: A cation-pi interaction in a transmembrane helix of vacuolar ATPase retains the proton-transporting arginine in a hydrophobic environment. J. Biol. Chem., 293, 2018
2KZ9	Structure of E1-69 of Yeast V-ATPase Descriptor: V-type proton ATPase subunit E Authors: Sankaranarayanan, N, Gruber, G. Deposit date: 2010-06-14 Release date: 2011-02-16 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR Solution Structure of Subunit E (E1-69) of the Saccharomyces cerevisiae V1VO ATPase To be Published
2DB4	Crystal structure of rotor ring with DCCD of the V- ATPase from Enterococcus hirae Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, DICYCLOHEXYLUREA, SODIUM ION, ... Authors: Murata, T, Yamato, I, Kakinuma, Y, Shirouzu, M, Walker, J.E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2005-12-15 Release date: 2006-12-05 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase. Proc.Natl.Acad.Sci.USA, 108, 2011
2K88	Association of subunit d (Vma6p) and E (Vma4p) with G (Vma10p) and the NMR solution structure of subunit G (G1-59) of the Saccharomyces cerevisiae V1VO ATPase Descriptor: Vacuolar proton pump subunit G Authors: Sankaranarayanan, N, Gayen, S, Thaker, Y, Subramanian, V, Manimekalai, M.S.S, Gruber, G. Deposit date: 2008-09-04 Release date: 2009-08-11 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Assembly of subunit d (Vma6p) and G (Vma10p) and the NMR solution structure of subunit G (G(1-59)) of the Saccharomyces cerevisiae V(1)V(O) ATPase. Biochim.Biophys.Acta, 1787, 2009
7OBP	Crystal structure of the human NCOA7-AS TLDc domain Descriptor: NCOA7-AS Authors: Blaise, M. Deposit date: 2021-04-23 Release date: 2021-07-14 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of the TLDc domain of human NCOA7-AS. Acta Crystallogr.,Sect.F, 77, 2021
3ND8	Structural characterization for the nucleotide binding ability of subunit A of the A1AO ATP synthase Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, ... Authors: Kumar, A, Gruber, G. Deposit date: 2010-06-07 Release date: 2011-03-30 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The transition-like state and Pi entrance into the catalytic a subunit of the biological engine A-ATP synthase. J.Mol.Biol., 408, 2011
3ND9	Structural characterization for the nucleotide binding ability of subunit A of the A1AO ATP synthase Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, V-type ATP synthase alpha chain Authors: Kumar, A, Jeyakanthan, J, Gruber, G. Deposit date: 2010-06-07 Release date: 2011-03-30 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.1 Å) Cite: The transition-like state and Pi entrance into the catalytic a subunit of the biological engine A-ATP synthase. J.Mol.Biol., 408, 2011
5X09	Crystal structure of subunit A mutant P235A/S238C of the A-ATP synthase from pyrococcus horikoshii OT3 Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ... Authors: Dhirendra, S, Gruber, G. Deposit date: 2017-01-20 Release date: 2017-11-29 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystallographic and enzymatic insights into the mechanisms of Mg-ADP inhibition in the A1 complex of the A1AO ATP synthase J. Struct. Biol., 201, 2018
7QSU	Crystal structure of homing endonuclease-associated TliVMA intein (C1A, d333-339) Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, V-ATPase Authors: Beyer, H.M, Iwai, H. Deposit date: 2022-01-14 Release date: 2022-03-30 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins. Front Mol Biosci, 9, 2022
7DQE	Crystal structure of the ADP-bound mutant A(S23C)3B(N64C)3 complex from enterococcus hirae V-ATPase Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ... Authors: Maruyama, S, Nakamoto, K, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, T. Deposit date: 2020-12-23 Release date: 2021-12-29 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.694 Å) Cite: The Combination of High-Speed AFM and X-ray Crystallography Reveals Rotary Catalytic Mechanism of Shaftless V1-ATPase To Be Published
7DQD	Crystal structure of the AMP-PNP-bound mutant A(S23C)3B(N64C)3 complex from enterococcus hirae V-ATPase Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Maruyama, S, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, T. Deposit date: 2020-12-23 Release date: 2021-12-29 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (3.383 Å) Cite: The combination of high-speed AFM and X-ray crystallography reveals rotary catalysis To Be Published
7DQC	Crystal structure of nucleotide-free mutant A(S23C)3B(N64C)3 complex from Enterococcus hirae V-ATPase Descriptor: GLYCEROL, V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B Authors: Maruyama, S, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, M. Deposit date: 2020-12-23 Release date: 2021-12-29 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.706 Å) Cite: The combination of high-speed AFM and X-ray crystallography reveals rotary catalytic mechanism of shaftless V1-ATPase To Be Published
7VW7	Crystal structure of the 2 ADP-AlF4-bound V1 complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... Authors: Suzuki, K, Shekhar, M, Gupta, C, Singharoy, A, Murata, T. Deposit date: 2021-11-09 Release date: 2022-06-22 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (3.818 Å) Cite: Revealing a Hidden Intermediate of Rotatory Catalysis with X-ray Crystallography and Molecular Simulations. Acs Cent.Sci., 8, 2022
3P20	Crystal structure of vanadate bound subunit A of the A1AO ATP synthase Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ... Authors: Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G. Deposit date: 2010-10-01 Release date: 2011-03-30 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.85 Å) Cite: The transition-like state and Pi entrance into the catalytic a subunit of the biological engine A-ATP synthase. J.Mol.Biol., 408, 2011
3VR4	Crystal structure of Enterococcus hirae V1-ATPase [eV1] Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ... Authors: Saijo, S, Arai, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T. Deposit date: 2012-04-03 Release date: 2013-01-16 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.172 Å) Cite: Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures Nature, 493, 2013
3VR6	Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1] Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ... Authors: Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T. Deposit date: 2012-04-03 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.68 Å) Cite: Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures Nature, 493, 2013
3VR5	Crystal structure of nucleotide-free Enterococcus hirae V1-ATPase [eV1(L)] Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ... Authors: Saijo, S, Arai, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T. Deposit date: 2012-04-03 Release date: 2013-01-16 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (3.9 Å) Cite: Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures Nature, 493, 2013
3LC8	Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-free form) Descriptor: GLYCEROL, MAGNESIUM ION, Maltose-binding periplasmic protein, ... Authors: Zhang, Y, Garavito, R.M. Deposit date: 2010-01-10 Release date: 2011-02-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein. Biochem.Biophys.Res.Commun., 407, 2011
3LBS	Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-bound form) Descriptor: Maltose-binding periplasmic protein, Renin receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose Authors: Zhang, Y, Garavito, R.M. Deposit date: 2010-01-08 Release date: 2011-02-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein. Biochem.Biophys.Res.Commun., 407, 2011
5KNC	Crystal structure of the 3 ADP-bound V1 complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... Authors: Suzuki, K, Mizutani, K, Maruyama, S, Shimono, K, Imai, F.L, Muneyuki, E, Kakinuma, Y, Ishizuka-Katsura, Y, Shirouzu, M, Yokoyama, S, Yamato, I, Murata, T. Deposit date: 2016-06-28 Release date: 2016-11-02 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.015 Å) Cite: Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor Nat Commun, 7, 2016

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