Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6Z36
DownloadVisualize
BU of 6z36 by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2118
Descriptor: 1,2-ETHANEDIOL, 4-methyl-3-(4-piperidin-4-ylphenyl)-5-(3,4,5-trimethoxyphenyl)pyridine, AMMONIUM ION, ...
Authors:Adamson, R.J, Williams, E.P, Smil, D, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2020-05-19
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2118
To Be Published
8QDJ
DownloadVisualize
BU of 8qdj by Molmil
Ntaya virus methyltransferase in complex wih Sinefungin
Descriptor: Ntaya virus methyltransferase, SINEFUNGIN, SULFATE ION
Authors:Krejcova, K, Boura, E, Klima, M.
Deposit date:2023-08-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 32, 2024
6Z9J
DownloadVisualize
BU of 6z9j by Molmil
Escherichia coli D-2-deoxyribose-5-phosphate aldolase - N21K mutant
Descriptor: Deoxyribose-phosphate aldolase, MAGNESIUM ION
Authors:Paakkonen, J, Hakulinen, N, Rouvinen, J.
Deposit date:2020-06-04
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Appl.Microbiol.Biotechnol., 104, 2020
6TZH
DownloadVisualize
BU of 6tzh by Molmil
ADC-7 in complex with boronic acid transition state inhibitor S06015
Descriptor: Beta-lactamase, GLYCINE, PHOSPHATE ION, ...
Authors:Fish, E.R, Powers, R.A, Wallar, B.J.
Deposit date:2019-08-12
Release date:2020-06-24
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of beta-Lactamase Inhibitors againstAcinetobacter baumanniiCephalosporinase.
Acs Infect Dis., 6, 2020
4Q23
DownloadVisualize
BU of 4q23 by Molmil
The role of threonine 201 and tyrosine 204 in the human farnesyl pyrophosphate synthase catalytic mechanism and the mode of inhibition by the nitrogen-containing bisphosphonates
Descriptor: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
Authors:Tsoumpra, M.K, Muniz, J.R.C, Barnett, B.L, Kwaasi, A.A, Pilka, E.S, Kavanagh, K.L, Evdokimov, A, Walter, R.L, Ebetino, F.H, von Delft, F, Oppermann, U, Russell, R.G.G, Dunford, J.E.
Deposit date:2014-04-05
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The role of threonine 201 and tyrosine 204 in the human farnesyl pyrophosphate synthase catalytic mechanism and the mode of inhibition by the nitrogen-containing bisphosphonates
To be Published
1QVG
DownloadVisualize
BU of 1qvg by Molmil
Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui
Descriptor: 23S ribosomal rna, 50S RIBOSOMAL PROTEIN L10E, 50S ribosomal protein L13P, ...
Authors:Schmeing, T.M, Moore, P.B, Steitz, T.A.
Deposit date:2003-08-27
Release date:2003-11-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit
RNA, 9, 2003
1LGL
DownloadVisualize
BU of 1lgl by Molmil
Solution structure of HERG-specific scorpion toxin BeKm-1
Descriptor: BeKm-1 toxin
Authors:Korolokova, Y.V, Bocharov, E.V, Angelo, K, Maslennikov, I.V, Grinenko, O.V, Lipkin, A.V, Nosireva, E.D, Pluzhnikov, K.A, Olesen, S.-P, Arseniev, A.S, Grishin, E.V.
Deposit date:2002-04-16
Release date:2002-11-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:New binding site on common molecular scaffold provides HERG channel specificity of scorpion toxin BeKm-1.
J.Biol.Chem., 277, 2002
6Z83
DownloadVisualize
BU of 6z83 by Molmil
CK2 alpha bound to chemical probe SGC-CK2-1
Descriptor: Casein kinase II subunit alpha, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
Authors:Kraemer, A, Wells, C, Drewry, D.H, Pickett, J.E, Axtman, A.D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-06-02
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.171 Å)
Cite:Development of a potent and selective chemical probe for the pleiotropic kinase CK2.
Cell Chem Biol, 28, 2021
6U5E
DownloadVisualize
BU of 6u5e by Molmil
RT XFEL structure of CypA solved using celloluse carrier media
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M, Nango, E, Nakane, T, Young, I.D, Brewster, A.S, Sugahara, M, Tanaka, R, Sauter, N.K, Tono, K, Iwata, S, Fraser, J.S, Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
1QL6
DownloadVisualize
BU of 1ql6 by Molmil
THE CATALYTIC MECHANISM OF PHOSPHORYLASE KINASE PROBED BY MUTATIONAL STUDIES
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PHOSPHORYLASE KINASE, ...
Authors:Skamnaki, V.T, Owen, D.J, Noble, M.E.M, Lowe, E.D, Oikonomakos, N.G, Johnson, L.N.
Deposit date:1999-08-24
Release date:1999-12-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Catalytic Mechanism of Phosphorylase Kinase Probed by Mutational Studies.
Biochemistry, 38, 1999
8QB5
DownloadVisualize
BU of 8qb5 by Molmil
Crystal structure of apo-GltTk obtained with in meso crystallization (P6322 space group)
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OLEIC ACID, Proton/glutamate symporter, ...
Authors:Marin, E, Guskov, A, Borshchevskiy, V, Kovalev, K.
Deposit date:2023-08-24
Release date:2024-09-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of apo-GltTk obtained with in meso crystallization (P6322 space group)
To Be Published
6YV0
DownloadVisualize
BU of 6yv0 by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM IN COMPLEX WITH A PYRROLIDINE-3-CARBOXYLIC ACID FRAGMENT 587
Descriptor: (3~{R})-1-(2-chlorophenyl)pyrrolidine-3-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ruza, R.R, Hillier, J, Jones, E.Y.
Deposit date:2020-04-27
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Screening of a Custom-Designed Acid Fragment Library Identifies 1-Phenylpyrroles and 1-Phenylpyrrolidines as Inhibitors of Notum Carboxylesterase Activity.
J.Med.Chem., 63, 2020
5UKG
DownloadVisualize
BU of 5ukg by Molmil
Crystal Structure of the genetically encoded calcium indicator K-GECO
Descriptor: CALCIUM ION, K-GECO
Authors:Schreiter, E.R.
Deposit date:2017-01-22
Release date:2018-02-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A genetically encoded Ca2+indicator based on circularly permutated sea anemone red fluorescent protein eqFP578.
BMC Biol., 16, 2018
6YUY
DownloadVisualize
BU of 6yuy by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM IN COMPLEX WITH A PYRROLE-3-CARBOXYLIC ACID FRAGMENT 471
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-methyl-5-(trifluoromethyl)-1~{H}-pyrrole-3-carboxylic acid, DIMETHYL SULFOXIDE, ...
Authors:Hillier, J, Ruza, R.R, Jones, E.Y.
Deposit date:2020-04-27
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Screening of a Custom-Designed Acid Fragment Library Identifies 1-Phenylpyrroles and 1-Phenylpyrrolidines as Inhibitors of Notum Carboxylesterase Activity.
J.Med.Chem., 63, 2020
6Z9H
DownloadVisualize
BU of 6z9h by Molmil
Escherichia coli D-2-deoxyribose-5-phosphate aldolase - C47V/G204A/S239D mutant
Descriptor: 1,2-ETHANEDIOL, Deoxyribose-phosphate aldolase, FORMIC ACID, ...
Authors:Paakkonen, J, Hakulinen, N, Rouvinen, J.
Deposit date:2020-06-04
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Appl.Microbiol.Biotechnol., 104, 2020
6E28
DownloadVisualize
BU of 6e28 by Molmil
The CARD9 CARD domain-swapped dimer
Descriptor: Caspase recruitment domain-containing protein 9
Authors:Holliday, M.J, Ferrao, R, Boenig, G, Deuber, E.C, Fairbrother, W.J.
Deposit date:2018-07-10
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Picomolar zinc binding modulates formation of Bcl10-nucleating assemblies of the caspase recruitment domain (CARD) of CARD9.
J. Biol. Chem., 293, 2018
1Y3D
DownloadVisualize
BU of 1y3d by Molmil
Crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 R67A mutant
Descriptor: CALCIUM ION, CITRIC ACID, POLYETHYLENE GLYCOL (N=34), ...
Authors:Radisky, E.S, Lu, C.J, Kwan, G, Koshland Jr, D.E.
Deposit date:2004-11-24
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of the intramolecular hydrogen bond network in the inhibitory power of chymotrypsin inhibitor 2
Biochemistry, 44, 2005
5USH
DownloadVisualize
BU of 5ush by Molmil
Structure of vaccinia virus D8 protein bound to human Fab vv66
Descriptor: Fab vv66 heavy chain, Fab vv66 light chain, IMV membrane protein
Authors:Zajonc, D.M.
Deposit date:2017-02-13
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8.
J. Biol. Chem., 293, 2018
2JEA
DownloadVisualize
BU of 2jea by Molmil
Structure of a 9-subunit archaeal exosome bound to RNA
Descriptor: EXOSOME COMPLEX EXONUCLEASE 1, EXOSOME COMPLEX EXONUCLEASE 2, EXOSOME COMPLEX RNA-BINDING PROTEIN 1, ...
Authors:Lorentzen, E, Conti, E.
Deposit date:2007-01-16
Release date:2007-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:RNA Channelling by the Archaeal Exosome.
Embo Rep., 8, 2007
2JE4
DownloadVisualize
BU of 2je4 by Molmil
Atomic-resolution crystal structure of chemically-synthesized HIV-1 protease in complex with JG-365
Descriptor: ACETATE ION, GLYCEROL, INHIBITOR MOLECULE JG365, ...
Authors:Malito, E, Johnson, E.C.B, Tang, W.J.
Deposit date:2007-01-15
Release date:2007-08-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Modular Total Chemical Synthesis of a Human Immunodeficiency Virus Type 1 Protease.
J.Am.Chem.Soc., 129, 2007
5G3G
DownloadVisualize
BU of 5g3g by Molmil
Preserving MEtallic Sites Affected by Radiation Damage the CuT2 case in Thermus Thermophilus multicopper Oxidase
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ...
Authors:Ruiz-Arellano, R, Diaz, A, Rosas, E, Rudino, E.
Deposit date:2016-04-26
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Preserving Metallic Sites Affected by Radiation Damage the Cut2 Case in Thermus Thermophilus Multicopper Oxidase
To be Published
6E9R
DownloadVisualize
BU of 6e9r by Molmil
DHF46 filament
Descriptor: DHF46 filament
Authors:Lynch, E.M, Shen, H, Fallas, J.A, Kollman, J.M, Baker, D.
Deposit date:2018-08-01
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:De novo design of self-assembling helical protein filaments.
Science, 362, 2018
2JGZ
DownloadVisualize
BU of 2jgz by Molmil
Crystal structure of phospho-CDK2 in complex with Cyclin B
Descriptor: CELL DIVISION PROTEIN KINASE 2, G2/MITOTIC-SPECIFIC CYCLIN-B1
Authors:Brown, N.R, Petri, E, Lowe, E.D, Skamnaki, V, Johnson, L.N.
Deposit date:2007-02-17
Release date:2007-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cyclin B and cyclin A confer different substrate recognition properties on CDK2.
Cell Cycle, 6, 2007
2X8R
DownloadVisualize
BU of 2x8r by Molmil
The structure of a family GH25 lysozyme from Aspergillus fumigatus
Descriptor: CHLORIDE ION, GLYCOSYL HYDROLASE
Authors:Korczynska, J.E, Danielsen, S, Schagerlof, U, Turkenburg, J.P, Davies, G.J, Wilson, K.S, Taylor, E.J.
Deposit date:2010-03-11
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of a Family Gh25 Lysozyme from Aspergillus Fumigatus
Acta Crystallogr.,Sect.F, 66, 2010
6TVI
DownloadVisualize
BU of 6tvi by Molmil
Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, Sialidase
Authors:Garman, E.F, Salinger, M.T, Murray, J.W, Laver, W.G, Kuhn, P, Vimr, E.R.
Deposit date:2020-01-09
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
To Be Published

225399

数据于2024-09-25公开中

PDB statisticsPDBj update infoContact PDBjnumon