PDB: 66724 resultsInfo pagesStatus searchChemie searchBIRD

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3CMI	Crystal structure of glutathione-dependent phospholipid peroxidase Hyr1 from the yeast Saccharomyces cerevisiae Descriptor: Peroxiredoxin HYR1 Authors: Zhang, W.J.Z, He, Y.X, Yu, J, Zhou, C.Z. Deposit date: 2008-03-21 Release date: 2008-09-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Crystal structure of glutathione-dependent phospholipid peroxidase Hyr1 from the yeast Saccharomyces cerevisiae Proteins, 73, 2008
4OTU	Crystal structure of the gamma-glutamyltranspeptidase from Bacillus licheniformis in complex with L-Glutamate Descriptor: GLUTAMIC ACID, Gamma glutamyl transpeptidase, Gamma-glutamyltranspeptidase, ... Authors: Merlino, A. Deposit date: 2014-02-14 Release date: 2014-07-23 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.022 Å) Cite: Low resolution X-ray structure of gamma-glutamyltranspeptidase from Bacillus licheniformis: Opened active site cleft and a cluster of acid residues potentially involved in the recognition of a metal ion. Biochim.Biophys.Acta, 1844, 2014
4OOO	X-ray structure of the lysozyme derivative of tetrakis(acetato)chlorido diruthenium(II,III) complex Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ... Authors: Merlino, A. Deposit date: 2014-02-03 Release date: 2014-06-18 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Unusual Structural Features in the Lysozyme Derivative of the Tetrakis(acetato)chloridodiruthenium(II,III) Complex. Angew.Chem.Int.Ed.Engl., 53, 2014
3AJ2	The structure of AxCeSD octamer (C-terminal HIS-tag) from Acetobacter xylinum Descriptor: Cellulose synthase operon protein D Authors: Hu, S.Q, Tajima, K, Zhou, Y, Tanaka, I, Yao, M. Deposit date: 2010-05-20 Release date: 2010-10-06 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure of bacterial cellulose synthase subunit D octamer with four inner passageways Proc.Natl.Acad.Sci.USA, 107, 2010
4OT4	X-ray Structure of the Adduct formed between cisplatin and Ribonuclease A Descriptor: Cisplatin, Ribonuclease pancreatic Authors: Messori, L, Merlino, A. Deposit date: 2014-02-13 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Cisplatin binding to proteins: molecular structure of the ribonuclease a adduct. Inorg.Chem., 53, 2014
4OVH	E. coli sliding clamp in complex with (R)-6-bromo-9-(2-(carboxymethylamino)-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid Descriptor: (2R)-6-bromo-9-{2-[(carboxymethyl)amino]-2-oxoethyl}-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid, CALCIUM ION, CHLORIDE ION, ... Authors: Yin, Z, Oakley, A.J. Deposit date: 2014-02-21 Release date: 2014-03-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Bacterial Sliding Clamp Inhibitors that Mimic the Sequential Binding Mechanism of Endogenous Linear Motifs. J.Med.Chem., 58, 2015
3CYY	The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide Descriptor: Tight junction protein ZO-1, peptide from Gap junction alpha-1 protein Authors: Pan, L, Zhang, M. Deposit date: 2008-04-27 Release date: 2008-09-23 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites Embo J., 27, 2008
3D7V	Crystal structure of Mcl-1 in complex with an Mcl-1 selective BH3 ligand Descriptor: Bcl-2-like protein 11, Induced myeloid leukemia cell differentiation protein Mcl-1, ZINC ION Authors: Lee, E.F, Czabotar, P.E, Colman, P.M, Fairlie, W.D. Deposit date: 2008-05-22 Release date: 2008-06-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.03 Å) Cite: A novel BH3 ligand that selectively targets Mcl-1 reveals that apoptosis can proceed without Mcl-1 degradation. J.Cell Biol., 180, 2008
3CSI	Crystal Structure of the Glutathione Transferase Pi allelic variant*C, I104V/A113V, in complex with the Chlorambucil-Glutathione Conjugate Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CARBONATE ION, ... Authors: Parker, L.J. Deposit date: 2008-04-09 Release date: 2008-07-01 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The anti-cancer drug chlorambucil as a substrate for the human polymorphic enzyme glutathione transferase P1-1: kinetic properties and crystallographic characterisation of allelic variants. J.Mol.Biol., 380, 2008
3CS1	Flagellar Calcium-binding Protein (FCaBP) from T. cruzi Descriptor: Flagellar calcium-binding protein Authors: Ames, J.B, Ladner, J.E, Wingard, J.N, Robinson, H, Fisher, A. Deposit date: 2008-04-08 Release date: 2008-06-24 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Insights into Membrane Targeting by the Flagellar Calcium-binding Protein (FCaBP), a Myristoylated and Palmitoylated Calcium Sensor in Trypanosoma cruzi. J.Biol.Chem., 283, 2008
6PH5	Binary product complex crystal structure of DNA polymerase Beta with an extra-helical template base Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... Authors: Batra, V.K, Wilson, S.H. Deposit date: 2019-06-25 Release date: 2019-12-11 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.602 Å) Cite: DNA polymerase beta nucleotide-stabilized template misalignment fidelity depends on local sequence context. J.Biol.Chem., 295, 2020
7ZMW	14-3-3s binding to non-natural peptide 2c Descriptor: 14-3-3 protein sigma, MAGNESIUM ION, non-natural peptide 1 Authors: Somsen, B.A, Craenmehr, F.W.B, Ottmann, C. Deposit date: 2022-04-19 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Functional mapping of the 14-3-3 hub protein as a guide to design 14-3-3 molecular glues. Chem Sci, 13, 2022
3VV6	Crystal Structure of beta secetase in complex with 2-amino-3-methyl-6-((1S, 2R)-2-phenylcyclopropyl)pyrimidin-4(3H)-one Descriptor: 2-amino-3-methyl-6-[(1S,2R)-2-phenylcyclopropyl]pyrimidin-4(3H)-one, Beta-secretase 1, GLYCEROL, ... Authors: Yonezawa, S, Yamamoto, T, Yamakawa, H, Muto, C, Hosono, M, Hattori, K, Higashino, K, Sakagami, M, Togame, H, Tanaka, Y, Nakano, T, Takemoto, H, Arisawa, M, Shuto, S. Deposit date: 2012-07-17 Release date: 2012-10-24 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Conformational restriction approach to beta-secretase (BACE1) inhibitors: effect of a cyclopropane ring to induce an alternative binding mode J.Med.Chem., 55, 2012
4HCQ	Crystal structure of GLMU from mycobacterium tuberculosis in complex with glucosamine-1-phosphate Descriptor: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, Bifunctional protein GlmU, COBALT (II) ION, ... Authors: Jagtap, P.K.A, Verma, S.K, Vithani, N. Deposit date: 2012-10-01 Release date: 2013-03-13 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structures identify an atypical two-metal-ion mechanism for uridyltransfer in GlmU: its significance to sugar nucleotidyl transferases J.Mol.Biol., 425, 2013
3HZO	Rv0554 from Mycobacterium tuberculosis - the structure solved from the tetragonal crystal form Descriptor: 1,2-ETHANEDIOL, MALONIC ACID, SODIUM ION, ... Authors: Johnston, J.M, Baker, E.N. Deposit date: 2009-06-23 Release date: 2010-06-02 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.6 Å) Cite: The structure of Rv0554 from Mycobacterium tuberculosis To be Published
3I0C	Crystal structure of GTB C80S/C196S unliganded Descriptor: ABO glycosyltransferase Authors: Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V. Deposit date: 2009-06-25 Release date: 2010-08-11 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding J.Mol.Biol., 402, 2010
3I0H	Crystal structure of GTB C80S/C196S/C209S unliganded Descriptor: ABO glycosyltransferase Authors: Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V. Deposit date: 2009-06-25 Release date: 2010-08-11 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding J.Mol.Biol., 402, 2010
6PA5	ECAII(T89V,K162T) MUTANT IN COMPLEX WITH L-ASN AT PH 8.3 IN SPACE GROUP P2(1) Descriptor: ASPARAGINE, GLYCEROL, IMIDAZOLE, ... Authors: Lubkowski, J, Wlodawer, A. Deposit date: 2019-06-11 Release date: 2019-09-04 Last modified: 2019-10-02 Method: X-RAY DIFFRACTION (2 Å) Cite: Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci., 28, 2019
4H97	Candida albicans dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5-(4-methylphenyl)phenyl]but-1-yn-1-yl}-6-methylpyrimidine-2,4-diamine (UCP111D4M) Descriptor: 5-[(3R)-3-(5-methoxy-4'-methylbiphenyl-3-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine, Dihydrofolate Reductase, GLYCEROL, ... Authors: Paulsen, J.L, Anderson, A.C. Deposit date: 2012-09-24 Release date: 2013-03-27 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural analysis of the active sites of dihydrofolate reductase from two species of Candida uncovers ligand-induced conformational changes shared among species. Bioorg.Med.Chem.Lett., 23, 2013
3VG6	Barium derivative of human LFABP Descriptor: BARIUM ION, Fatty acid-binding protein, liver, ... Authors: Sharma, A, Yogavel, M, Sharma, A. Deposit date: 2011-08-03 Release date: 2012-06-20 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
4U9W	Crystal Structure of NatD bound to H4/H2A peptide and CoA Descriptor: COENZYME A, GLYCEROL, Histone H4/H2A N-terminus, ... Authors: Magin, R.S, Liszczak, G.P, Marmorstein, R. Deposit date: 2014-08-06 Release date: 2015-01-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.49 Å) Cite: The Molecular Basis for Histone H4- and H2A-Specific Amino-Terminal Acetylation by NatD. Structure, 23, 2015
3HPM	Oxidized dimeric PICK1 PDZ C46G mutant in complex with the carboxyl tail peptide of GluR2 Descriptor: PRKCA-binding protein,9-mer peptide of THE GLUR2 SUBUNIT Authors: Yu, J, Shi, Y, Zhang, M. Deposit date: 2009-06-04 Release date: 2010-06-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Redox-Regulated Lipid Membrane Binding of the PICK1 PDZ Domain. Biochemistry, 49, 2010
3HPS	Crystal structure of Mycobacterium tuberculosis LeuA complexed with ketoisocaproate (KIC) Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, 2-isopropylmalate synthase, GLYCEROL, ... Authors: Koon, N, Squire, C.J, Baker, E.N. Deposit date: 2009-06-04 Release date: 2010-05-19 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Probing the active site of M. tuberculosis LeuA To be Published
3HQ4	Crystal Structure of C151S mutant of Glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH1) complexed with NAD from Staphylococcus aureus MRSA252 at 2.2 angstrom resolution Descriptor: Glyceraldehyde-3-phosphate dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Mukherjee, S, Dutta, D, Saha, B, Das, A.K. Deposit date: 2009-06-05 Release date: 2010-06-23 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 1 from methicillin-resistant Staphylococcus aureus MRSA252 provides novel insights into substrate binding and catalytic mechanism. J.Mol.Biol., 401, 2010
3I6L	Newly identified epitope N1 derived from SARS-CoV N protein complexed with HLA-A*2402 Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ... Authors: Liu, J.W. Deposit date: 2009-07-07 Release date: 2010-07-14 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Novel immunodominant peptide presentation strategy: a featured HLA-A*2402-restricted cytotoxic T-lymphocyte epitope stabilized by intrachain hydrogen bonds from severe acute respiratory syndrome coronavirus nucleocapsid protein J.Virol., 84, 2010

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