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7LO6
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BU of 7lo6 by Molmil
Structure of CD4 mimetic BNM-III-170 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab
Descriptor: 17b Fab Heavy Chain, 17b Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jette, C.A, Bjorkman, P.J.
Deposit date:2021-02-09
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of HIV-1 trimer bound to CD4-mimetics BNM-III-170 and M48U1 adopt a CD4-bound open conformation.
Nat Commun, 12, 2021
7LXY
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BU of 7lxy by Molmil
SARS-CoV-2 S/S2M11/S2X333 Global Refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, S2M11 Fab Heavy Chain variable region, ...
Authors:McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-03-05
Release date:2021-04-14
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:N-terminal domain antigenic mapping reveals a site of vulnerability for SARS-CoV-2.
Cell, 184, 2021
1V1J
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BU of 1v1j by Molmil
Crystal structure of type II Dehydroquintae Dehydratase from Streptomyces coelicolor in complex with 3-fluoro
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-ANHYDRO-3-FLUORO-QUINIC ACID, 3-DEHYDROQUINATE DEHYDRATASE
Authors:Roszak, A.W, Coggins, J.R, Lapthorn, A.J.
Deposit date:2004-04-16
Release date:2005-01-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:(1R,4S,5R)-3-Fluoro-1,4,5-Trihydroxy-2-Cyclohexene-1-Carboxylic Acid: The Fluoro Analogue of the Enolate Intermediate in the Reaction Catalyzed by Type II Dehydroquinases
Org.Biomol.Chem., 2, 2004
7MDZ
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BU of 7mdz by Molmil
80S rabbit ribosome stalled with benzamide-CHX
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S21, ...
Authors:Koga, Y, Hoang, E.M, Park, Y, Keszei, A.F.A, Murray, J, Shao, S, Liau, B.B.
Deposit date:2021-04-06
Release date:2021-09-01
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Discovery of C13-Aminobenzoyl Cycloheximide Derivatives that Potently Inhibit Translation Elongation.
J.Am.Chem.Soc., 143, 2021
7M20
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BU of 7m20 by Molmil
18-mer HeLa-tubulin rings in complex with Cryptophycin 1
Descriptor: Cryptophycin 1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Eren, E.
Deposit date:2021-03-15
Release date:2021-09-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Conformational changes in tubulin upon binding cryptophycin-52 reveal its mechanism of action.
J.Biol.Chem., 297, 2021
7MPP
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BU of 7mpp by Molmil
Bartonella henselae NrnC cleaving pGG in the presence of Mg2+
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, NanoRNase C
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2021-05-04
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of NrnC identifies unifying features of dinucleotidases.
Elife, 10, 2021
7MPQ
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BU of 7mpq by Molmil
Bartonella henselae NrnC cleaving pGG in the presence of Mn2+
Descriptor: 5'-phosphorylated GG, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2021-05-04
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural characterization of NrnC identifies unifying features of dinucleotidases.
Elife, 10, 2021
7MQA
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BU of 7mqa by Molmil
Cryo-EM structure of the human SSU processome, state post-A1
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MPH
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BU of 7mph by Molmil
GRB2 SH2 Domain with Compound 7
Descriptor: (4-{(10R,11E,14S,18S)-18-(2-amino-2-oxoethyl)-14-[(naphthalen-1-yl)methyl]-8,17,20-trioxo-7,16,19-triazaspiro[5.14]icos-11-en-10-yl}phenyl)acetic acid, 1,2-ETHANEDIOL, Growth factor receptor-bound protein 2, ...
Authors:Sun, L, Schonbrunn, E.
Deposit date:2021-05-04
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and structural characterization of a monocarboxylic inhibitor for GRB2 SH2 domain.
Bioorg.Med.Chem.Lett., 51, 2021
7L20
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BU of 7l20 by Molmil
Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.
Descriptor: 16S rRNA mitochondrial, 39 S P-site finger, 39S ribosomal protein L10, ...
Authors:Agrawal, E, Koripella, R.
Deposit date:2020-12-15
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
7L08
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BU of 7l08 by Molmil
Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.
Descriptor: 12S rRNA, 16S RRNA, 28S ribosomal protein S10, ...
Authors:Koripella, R, Agrawal, E.K, Deep, A, Agrawal, R.K.
Deposit date:2020-12-11
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
1NOM
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BU of 1nom by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF MNCL2 (5 MILLIMOLAR)
Descriptor: DNA POLYMERASE BETA, MANGANESE (II) ION
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1996-04-19
Release date:1996-11-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis.
Biochemistry, 35, 1996
7L6G
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BU of 7l6g by Molmil
MbnP from Methylosinus trichosporium
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, COPPER (II) ION, ...
Authors:Manesis, A.C, Rosenzweig, A.C.
Deposit date:2020-12-23
Release date:2021-05-26
Last modified:2021-07-14
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Copper binding by a unique family of metalloproteins is dependent on kynurenine formation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7KZ6
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BU of 7kz6 by Molmil
Crystal structure of KabA from Bacillus cereus UW85 with bound cofactor PMP
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Authors:Prasertanan, T, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2020-12-10
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Snapshots along the catalytic path of KabA, a PLP-dependent aminotransferase required for kanosamine biosynthesis in Bacillus cereus UW85.
J.Struct.Biol., 213, 2021
7KZD
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BU of 7kzd by Molmil
Crystal structure of KabA from Bacillus cereus UW85 in complex with the reduced internal aldimine and with bound Glutarate
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, 1,2-ETHANEDIOL, Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, ...
Authors:Prasertanan, T, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2020-12-10
Release date:2021-05-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Snapshots along the catalytic path of KabA, a PLP-dependent aminotransferase required for kanosamine biosynthesis in Bacillus cereus UW85.
J.Struct.Biol., 213, 2021
7KGA
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BU of 7kga by Molmil
Crystal structure of a mosquito-borne flavivirus dumbbell RNA
Descriptor: IRIDIUM HEXAMMINE ION, RNA (90-MER)
Authors:Akiyama, B.M, Graham, M.E, O'Donoghue, Z, Beckham, J.D, Kieft, J.S.
Deposit date:2020-10-16
Release date:2021-06-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of a flavivirus dumbbell RNA reveals molecular details of an RNA regulator of replication.
Nucleic Acids Res., 49, 2021
7KGU
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BU of 7kgu by Molmil
Structure of 2Q1-Fab, an antibody selective for IDH2R140Q-HLA-B*07:02
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Miller, M.S, Aytenfisu, T.Y, Wright, K.M, Gabelli, S.B.
Deposit date:2020-10-18
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural engineering of chimeric antigen receptors targeting HLA-restricted neoantigens.
Nat Commun, 12, 2021
7MQ8
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BU of 7mq8 by Molmil
Cryo-EM structure of the human SSU processome, state pre-A1
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MQ9
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BU of 7mq9 by Molmil
Cryo-EM structure of the human SSU processome, state pre-A1*
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MUQ
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BU of 7muq by Molmil
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 1
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MLY
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BU of 7mly by Molmil
Cryo-EM reveals partially and fully assembled native glycine receptors,heteromeric pentamer
Descriptor: 3D1 Fab Heavy Chain, 3D1 Fab Light Chain, DECANE, ...
Authors:Zhu, H, Gouaux, E.
Deposit date:2021-04-29
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Architecture and assembly mechanism of native glycine receptors.
Nature, 599, 2021
7MUV
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BU of 7muv by Molmil
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 3
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MUD
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BU of 7mud by Molmil
Legionella pneumophila Dot/Icm T4SS OMC
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MUY
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BU of 7muy by Molmil
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 5
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MUC
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BU of 7muc by Molmil
Legionella pneumophila Dot/Icm T4SS C1 Reconstruction
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021

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数据于2024-08-28公开中

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