Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6AP8
DownloadVisualize
BU of 6ap8 by Molmil
Crystal Structure of rice D14 bound to 2-(2-methyl-3-nitroanilino)benzoic acid
Descriptor: 2-[(2-methyl-3-nitrophenyl)amino]benzoic acid, GLYCEROL, Strigolactone esterase D14
Authors:Hamiaux, C.
Deposit date:2017-08-17
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Inhibition of strigolactone receptors byN-phenylanthranilic acid derivatives: Structural and functional insights.
J. Biol. Chem., 293, 2018
4X4F
DownloadVisualize
BU of 4x4f by Molmil
RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 20.6 MGy
Descriptor: 35-MER DNA, Regulatory protein
Authors:Bury, C.S, McGeehan, J.E, Garman, E.F.
Deposit date:2014-12-02
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Radiation damage to nucleoprotein complexes in macromolecular crystallography.
J.Synchrotron Radiat., 22, 2015
6XX7
DownloadVisualize
BU of 6xx7 by Molmil
Arabidopsis thaliana Casein Kinase 2 (CK2) alpha-1 crystal in complex with ANP
Descriptor: CHLORIDE ION, Casein kinase II subunit alpha-1, MAGNESIUM ION, ...
Authors:Demulder, M, De Veylder, L, Loris, R.
Deposit date:2020-01-27
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Arabidopsis thaliana casein kinase 2 alpha 1.
Acta Crystallogr.,Sect.F, 76, 2020
3FSR
DownloadVisualize
BU of 3fsr by Molmil
Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-295 of T. brockii ADH by C. beijerinckii ADH
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, NADP-dependent alcohol dehydrogenase, ...
Authors:Frolow, F, Greenblatt, H, Goihberg, E, Burstein, Y.
Deposit date:2009-01-11
Release date:2010-01-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms
Biochemistry, 49, 2010
4X4M
DownloadVisualize
BU of 4x4m by Molmil
Structure of FcgammaRI in complex with Fc reveals the importance of glycan recognition for high affinity IgG binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lu, J, Sun, P.D.
Deposit date:2014-12-03
Release date:2015-04-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.485 Å)
Cite:Structure of Fc gamma RI in complex with Fc reveals the importance of glycan recognition for high-affinity IgG binding.
Proc.Natl.Acad.Sci.USA, 112, 2015
6XXJ
DownloadVisualize
BU of 6xxj by Molmil
Crystal Structure of Human Deoxyhypusine Synthase in complex with spermidine and NAD
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Wator, E, Wilk, P, Grudnik, P.
Deposit date:2020-01-27
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Half Way to Hypusine-Structural Basis for Substrate Recognition by Human Deoxyhypusine Synthase.
Biomolecules, 10, 2020
5CNT
DownloadVisualize
BU of 5cnt by Molmil
Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex bound to UDP and dATP at 3.25 Angstroms resolution
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, MU-OXO-DIIRON, ...
Authors:Chen, P.Y.-T, Zimanyi, C.M, Funk, M.A, Drennan, C.L.
Deposit date:2015-07-18
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Molecular basis for allosteric specificity regulation in class Ia ribonucleotide reductase from Escherichia coli.
Elife, 5, 2016
2E7E
DownloadVisualize
BU of 2e7e by Molmil
Bent-binding of cyanide to the heme iron in rat heme oxygenase-1
Descriptor: CYANIDE ION, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M, Fukuyama, K.
Deposit date:2007-01-09
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Alternative cyanide-binding modes to the haem iron in haem oxygenase
Acta Crystallogr.,Sect.F, 63, 2007
6XZC
DownloadVisualize
BU of 6xzc by Molmil
CryoEM structure of the ring-shaped virulence factor EspB from Mycobacterium tuberculosis
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Piton, J, Pojer, F, Wakatsuki, S, Gati, C, Cole, S.T.
Deposit date:2020-02-03
Release date:2020-06-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:High resolution CryoEM structure of the ring-shaped virulence factor EspB fromMycobacterium tuberculosis.
J Struct Biol X, 4, 2020
2VRY
DownloadVisualize
BU of 2vry by Molmil
Mouse Neuroglobin with heme iron in the reduced ferrous state
Descriptor: NEUROGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Arcovito, A, Moschetti, T, D'Angelo, P, Mancini, G, Vallone, B, Brunori, M, Della Longa, S.
Deposit date:2008-04-16
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:An X-Ray Diffraction and X-Ray Absorption Spectroscopy Joint Study of Neuroglobin.
Arch.Biochem.Biophys., 475, 2008
3FS1
DownloadVisualize
BU of 3fs1 by Molmil
Crystal structure of HNF4a LBD in complex with the ligand and the coactivator PGC-1a fragment
Descriptor: Hepatocyte nuclear factor 4-alpha, MYRISTIC ACID, PPARgamma Coactivator-1a (PGC-1a)
Authors:Rha, G, Wu, G, Chi, Y.
Deposit date:2009-01-08
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Multiple binding modes between HNF4alpha and the LXXLL motifs of PGC-1alpha lead to full activation
J.Biol.Chem., 284, 2009
2E7S
DownloadVisualize
BU of 2e7s by Molmil
Crystal structure of the yeast Sec2p GEF domain
Descriptor: Rab guanine nucleotide exchange factor SEC2
Authors:Fukai, S, Sato, Y, Nureki, O.
Deposit date:2007-01-12
Release date:2007-02-27
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Asymmetric Coiled-Coil Structure with Guanine Nucleotide Exchange Activity
Structure, 15, 2007
6XT8
DownloadVisualize
BU of 6xt8 by Molmil
Crystal structure of haloalkane dehalogenase variant DhaA115 domain-swapped dimer type-2
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Markova, K, Damborsky, J, Marek, M.
Deposit date:2020-01-15
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers
Acs Catalysis, 11, 2021
4X6R
DownloadVisualize
BU of 4x6r by Molmil
An Isoform-specific Myristylation Switch Targets RIIb PKA Holoenzymes to Membranes
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Zhang, P, Ye, F, Bastidas, A.C, Kornev, A.P, Ginsberg, M.H, Wu, J, Taylor, S.S.
Deposit date:2014-12-09
Release date:2015-07-22
Last modified:2020-06-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An Isoform-Specific Myristylation Switch Targets Type II PKA Holoenzymes to Membranes.
Structure, 23, 2015
6AST
DownloadVisualize
BU of 6ast by Molmil
NMR and Restrained Molecular Dynamics Determination of the Structure of an Aza-Benzimidazole Derivative Complex with the DNA Minor Groove of an -AAGATA Sequence
Descriptor: DNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*TP*CP*TP*TP*GP*G)-3'), amino(4-{[(2-{4-[amino(iminio)methyl]phenyl}-3H-imidazo[4,5-b]pyridin-5-yl)oxy]methyl}phenyl)methaniminium
Authors:Harika, N.K, Germann, M.W, Wilson, W.D.
Deposit date:2017-08-25
Release date:2018-01-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:First Structure of a Designed Minor Groove Binding Heterocyclic Cation that Specifically Recognizes Mixed DNA Base Pair Sequences.
Chemistry, 23, 2017
4X7D
DownloadVisualize
BU of 4x7d by Molmil
Crystal structure of 2012 NSW GII.4 P domain in complex with Nano-85
Descriptor: 1,2-ETHANEDIOL, Nano-85 Nanobody, VP1
Authors:Koromyslova, A.D, Hansman, G.S.
Deposit date:2014-12-09
Release date:2014-12-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nanobody binding to a conserved epitope promotes norovirus particle disassembly.
J.Virol., 89, 2015
1L6V
DownloadVisualize
BU of 1l6v by Molmil
STRUCTURE OF REDUCED BOVINE ADRENODOXIN
Descriptor: Adrenodoxin 1, FE2/S2 (INORGANIC) CLUSTER
Authors:Beilke, D, Weiss, R, Lohr, F, Pristovsek, P, Hannemann, F, Bernhardt, R, Rueterjans, H.
Deposit date:2002-03-14
Release date:2002-06-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A new electron transport mechanism in mitochondrial steroid hydroxylase systems based on structural changes upon the reduction of adrenodoxin.
Biochemistry, 41, 2002
4X7M
DownloadVisualize
BU of 4x7m by Molmil
Crystal structure of S. aureus TarM G117R mutant in complex with UDP and UDP-GlcNAc
Descriptor: TarM, URIDINE-5'-DIPHOSPHATE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Worrall, L.J, Sobhanifar, S, Strynadka, N.C.
Deposit date:2014-12-09
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase.
Proc.Natl.Acad.Sci.USA, 112, 2015
2VOY
DownloadVisualize
BU of 2voy by Molmil
CryoEM model of CopA, the copper transporting ATPase from Archaeoglobus fulgidus
Descriptor: CATION-TRANSPORTING ATPASE, P-TYPE, POTENTIAL COPPER-TRANSPORTING ATPASE, ...
Authors:Wu, C.-C, Rice, W.J, Stokes, D.L.
Deposit date:2008-02-25
Release date:2009-05-26
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Structure of a Copper Pump Suggests a Regulatory Role for its Metal-Binding Domain.
Structure, 16, 2008
4JC7
DownloadVisualize
BU of 4jc7 by Molmil
Human LTC4 synthase in complex with product analogs - implications for enzyme catalysis
Descriptor: Leukotriene C4 synthase, NICKEL (II) ION, PALMITIC ACID, ...
Authors:Niegowski, D, Rinaldo-Matthis, A, Haeggstrom, J.Z.
Deposit date:2013-02-21
Release date:2014-01-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Leukotriene C4 Synthase in Complex with Product Analogs: IMPLICATIONS FOR THE ENZYME MECHANISM.
J.Biol.Chem., 289, 2014
1L7Q
DownloadVisualize
BU of 1l7q by Molmil
Ser117Ala Mutant of Bacterial Cocaine Esterase cocE
Descriptor: BENZOIC ACID, cocaine esterase
Authors:Turner, J.M, Larsen, N.A, Basran, A, Barbas III, C.F, Bruce, N.C, Wilson, I.A, Lerner, R.A.
Deposit date:2002-03-16
Release date:2003-02-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Biochemical characterization and structural analysis of a highly proficient cocaine esterase
Biochemistry, 41, 2002
6APY
DownloadVisualize
BU of 6apy by Molmil
Scabin (W128Y) toxin from Streptomyces scabies
Descriptor: Scabin
Authors:Lyons, B, Lidster, T, Merrill, A.R.
Deposit date:2017-08-18
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization of the catalytic signature of Scabin toxin, a DNA-targeting ADP-ribosyltransferase.
Biochem. J., 475, 2018
4X8X
DownloadVisualize
BU of 4x8x by Molmil
Crystal structure of Dscam1 isoform 1.9, N-terminal four Ig domains
Descriptor: Down Syndrome cell adhesion molecule isoform 1.9, GLYCEROL, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, Q.
Deposit date:2014-12-11
Release date:2015-12-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
3FYD
DownloadVisualize
BU of 3fyd by Molmil
Crystal Structure of Dim1 from the thermophilic archeon, Methanocaldococcus jannaschi
Descriptor: Probable dimethyladenosine transferase, SULFATE ION
Authors:Scarsdale, J.N, Musayev, F.N, Rife, J.P.
Deposit date:2009-01-22
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases.
J.Mol.Biol., 391, 2009
1LA1
DownloadVisualize
BU of 1la1 by Molmil
Gro-EL Fragment (Apical Domain) Comprising Residues 188-379
Descriptor: GroEL
Authors:Ashcroft, A.E, Brinker, A, Coyle, J.E, Weber, F, Kaiser, M, Moroder, L, Parsons, M.R, Jager, J, Hartl, U.F, Hayer-Hartl, M, Radford, S.E.
Deposit date:2002-03-27
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural plasticity and noncovalent substrate binding in the GroEL apical domain. A study using electrospay ionization mass spectrometry and fluorescence binding studies.
J.Biol.Chem., 277, 2002

225399

数据于2024-09-25公开中

PDB statisticsPDBj update infoContact PDBjnumon