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3DWT
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BU of 3dwt by Molmil
Structure of CabBCII-10 nanobody
Descriptor: GLYCEROL, cAbBCII-10
Authors:Vincke, C, Loris, R, Muyldermans, S, Conrath, K.
Deposit date:2008-07-23
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold.
J.Biol.Chem., 2008
2VC7
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BU of 2vc7 by Molmil
Structural basis for natural lactonase and promiscuous phosphotriesterase activities
Descriptor: (4S)-4-(decanoylamino)-5-hydroxy-3,4-dihydro-2H-thiophenium, 1,2-ETHANEDIOL, ARYLDIALKYLPHOSPHATASE, ...
Authors:Elias, M, Dupuy, J, Merone, L, Mandrich, L, Moniot, S, Rochu, D, Lecomte, C, Rossi, M, Masson, P, Manco, G, Chabriere, E.
Deposit date:2007-09-19
Release date:2008-04-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Basis for Natural Lactonase and Promiscuous Phosphotriesterase Activities.
J.Mol.Biol., 379, 2008
1M07
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BU of 1m07 by Molmil
RESIDUES INVOLVED IN THE CATALYSIS AND BASE SPECIFICITY OF CYTOTOXIC RIBONUCLEASE FROM BULLFROG (RANA CATESBEIANA)
Descriptor: 5'-D(*AP*CP*GP*A)-3', Ribonuclease
Authors:Leu, Y.-J, Chern, S.-S, Wang, S.-C, Hsiao, Y.-Y, Amiraslanov, I, Liaw, Y.-C, Liao, Y.-D.
Deposit date:2002-06-12
Release date:2003-01-21
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Residues involved in the catalysis, base specificity, and cytotoxicity of ribonuclease from Rana catesbeiana based upon mutagenesis and X-ray crystallography
J.Biol.Chem., 278, 2003
2FI2
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BU of 2fi2 by Molmil
Solution structure of the SCAN homodimer from MZF-1/ZNF42
Descriptor: Zinc finger protein 42
Authors:Volkman, B.F, Peterson, F.C, Sander, T.L, Waltner, J.K, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-12-27
Release date:2006-01-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the SCAN domain from the tumor suppressor protein MZF1.
J.Mol.Biol., 363, 2006
3C5F
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BU of 3c5f by Molmil
Structure of a binary complex of the R517A Pol lambda mutant
Descriptor: DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*DC)-3'), DNA (5'-D(*DCP*DGP*DGP*DCP*DCP*DGP*DTP*DAP*DCP*DTP*DG)-3'), DNA (5'-D(P*DGP*DCP*DCP*DG)-3'), ...
Authors:Garcia-Diaz, M, Bebenek, K, Foley, M.C, Pedersen, L.C, Schlick, T, Kunkel, T.A.
Deposit date:2008-01-31
Release date:2008-09-02
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Substrate-induced DNA strand misalignment during catalytic cycling by DNA polymerase lambda.
Embo Rep., 9, 2008
2V3H
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BU of 2v3h by Molmil
Thrombin with 3-cycle no F
Descriptor: (2R)-({4-[AMINO(IMINO)METHYL]PHENYL}AMINO){3-[3-(DIMETHYLAMINO)-2,2-DIMETHYLPROPOXY]-5-ETHYLPHENYL}ACETIC ACID, CALCIUM ION, HIRUDIN IIA, ...
Authors:Banner, D.W, Obst, U.
Deposit date:2007-06-18
Release date:2008-06-24
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Fluorine in Pharmaceuticals: Looking Beyond Intuition.
Science, 317, 2007
1K8S
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BU of 1k8s by Molmil
BULGED ADENOSINE IN AN RNA DUPLEX
Descriptor: 5'-R(*GP*CP*GP*GP*CP*AP*CP*CP*UP*GP*CP*C)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*UP*GP*CP*CP*GP*C)-3'
Authors:Thiviyanathan, V, Guliaev, A.B, Leontis, N.B, Gorenstein, D.G.
Deposit date:2001-10-25
Release date:2001-11-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution conformation of a bulged adenosine base in an RNA duplex by relaxation matrix refinement.
J.Mol.Biol., 300, 2000
1USU
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BU of 1usu by Molmil
The Structure of the complex between Aha1 and HSP90
Descriptor: AHA1, GLYCEROL, HEAT SHOCK PROTEIN HSP82
Authors:Meyer, P, Roe, S.M, Pearl, L.H.
Deposit date:2003-12-01
Release date:2004-01-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis for Recruitment of the ATPase Activator Aha1 to the Hsp90 Chaperone Machinery.
Embo J., 23, 2004
2HXL
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BU of 2hxl by Molmil
crystal structure of Chek1 in complex with inhibitor 1
Descriptor: 3-(5-{[4-(AMINOMETHYL)PIPERIDIN-1-YL]METHYL}-1H-INDOL-2-YL)-1H-INDAZOLE-6-CARBONITRILE, Serine/threonine-protein kinase Chk1
Authors:Yan, Y.
Deposit date:2006-08-03
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Development of 6-substituted indolylquinolinones as potent Chek1 kinase inhibitors.
Bioorg.Med.Chem.Lett., 16, 2006
1FP0
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BU of 1fp0 by Molmil
SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE KAP-1 COREPRESSOR
Descriptor: KAP-1 COREPRESSOR, ZINC ION
Authors:Capili, A.D, Schultz, D.C, Rauscher III, F.J, Borden, K.L.B.
Deposit date:2000-08-29
Release date:2001-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the PHD domain from the KAP-1 corepressor: structural determinants for PHD, RING and LIM zinc-binding domains.
EMBO J., 20, 2001
2V45
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BU of 2v45 by Molmil
A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, MOLYBDENUM ATOM, ...
Authors:Najmudin, S, Gonzalez, P.J, Trincao, J, Coelho, C, Mukhopadhyay, A, Romao, C.C, Moura, I, Moura, J.J, Brondino, C.D, Romao, M.J.
Deposit date:2007-06-27
Release date:2008-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Periplasmic Nitrate Reductase Revisited: A Sulfur Atom Completes the Sixth Coordination of the Catalytic Molybdenum.
J.Biol.Inorg.Chem., 13, 2008
3BVN
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BU of 3bvn by Molmil
High resolution crystal structure of HLA-B*1402 in complex with the latent membrane protein 2 peptide (LMP2) of Epstein-Barr virus
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B*1402 alpha chain, ...
Authors:Kumar, P, Vahedi-Faridi, A, Saenger, W, Uchanska-Ziegler, B, Ziegler, A.
Deposit date:2008-01-07
Release date:2009-02-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for T cell alloreactivity among three HLA-B14 and HLA-B27 antigens
J.Biol.Chem., 284, 2009
3EBA
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BU of 3eba by Molmil
CAbHul6 FGLW mutant (humanized) in complex with human lysozyme
Descriptor: CAbHul6, Lysozyme C, SULFATE ION
Authors:Loris, R, Vincke, C, Saerens, D, Martinez-Rodriguez, S, Muyldermans, S, Conrath, K.
Deposit date:2008-08-27
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:General Strategy to Humanize a Camelid Single-domain Antibody and Identification of a Universal Humanized Nanobody Scaffold
J.Biol.Chem., 284, 2009
2HXQ
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BU of 2hxq by Molmil
crystal structure of Chek1 in complex with inhibitor 2
Descriptor: 3-(5-{[4-(AMINOMETHYL)PIPERIDIN-1-YL]METHYL}-1H-INDOL-2-YL)QUINOLIN-2(1H)-ONE, Serine/threonine-protein kinase Chk1
Authors:Yan, Y.
Deposit date:2006-08-03
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of 6-substituted indolylquinolinones as potent Chek1 kinase inhibitors.
Bioorg.Med.Chem.Lett., 16, 2006
2HY0
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BU of 2hy0 by Molmil
crystal structure of chek1 in complex with inhibitor 22
Descriptor: 3-[5-(PIPERIDIN-1-YLMETHYL)-1H-INDOL-2-YL]-6-(1H-PYRAZOL-4-YL)QUINOLIN-2(1H)-ONE, Serine/threonine-protein kinase Chk1
Authors:Yan, Y.
Deposit date:2006-08-04
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Development of 6-substituted indolylquinolinones as potent Chek1 kinase inhibitors.
Bioorg.Med.Chem.Lett., 16, 2006
1W2W
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BU of 1w2w by Molmil
Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits
Descriptor: 5-METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE, SULFATE ION
Authors:Bumann, M, Djafarzadeh, S, Oberholzer, A.E, Bigler, P, Altmann, M, Trachsel, H, Baumann, U.
Deposit date:2004-07-09
Release date:2004-07-16
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Yeast Ypr118W, a Methylthioribose-1-Phosphate Isomerase Related to Regulatory Eif2B Subunits
J.Biol.Chem., 279, 2004
3GSW
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BU of 3gsw by Molmil
Crystal structure of the binary complex between HLA-A2 and HCMV NLV-T8A peptide variant
Descriptor: Beta-2-microglobulin, HCMV pp65 fragment 495-503, variant T8A (NLVPMVAAV), ...
Authors:Reiser, J.-B, Saulquin, X, Gras, S, Debeaupuis, E, Echasserieau, K, Kissenpfennig, A, Legoux, F, Chouquet, A, Le Gorrec, M, Machillot, P, Neveu, B, Thielens, N, Malissen, B, Bonneville, M, Housset, D.
Deposit date:2009-03-27
Release date:2009-08-04
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural bases for the affinity-driven selection of a public TCR against a dominant human cytomegalovirus epitope.
J.Immunol., 183, 2009
1W6B
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BU of 1w6b by Molmil
Solution NMR Structure of a Long Neurotoxin from the Venom of the Asian Cobra, 20 Structures
Descriptor: LONG NEUROTOXIN 1
Authors:Talebzadeh-Farooji, M, Amininasab, M, Elmi, M.M, Naderi-Manesh, H, Sarbolouki, M.N.
Deposit date:2004-08-17
Release date:2004-12-22
Last modified:2018-05-09
Method:SOLUTION NMR
Cite:Solution structure of long neurotoxin NTX-1 from the venom of Naja naja oxiana by 2D-NMR spectroscopy.
Eur. J. Biochem., 271, 2004
1STG
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BU of 1stg by Molmil
TWO DISTINCTLY DIFFERENT METAL BINDING MODES ARE SEEN IN X-RAY CRYSTAL STRUCTURES OF STAPHYLOCOCCAL NUCLEASE-COBALT(II)-NUCLEOTIDE COMPLEXES
Descriptor: COBALT (II) ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Loll, P.J, Quirk, S, Lattman, E.E.
Deposit date:1994-10-27
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structures of staphylococcal nuclease complexed with the competitive inhibitor cobalt(II) and nucleotide.
Biochemistry, 34, 1995
3DXL
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BU of 3dxl by Molmil
Crystal structure of AeD7 from Aedes Aegypti
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Allergen Aed a 2, CHLORIDE ION, ...
Authors:Andersen, J.F, Calvo, E, Mans, B.J, Ribeiro, J.M.
Deposit date:2008-07-24
Release date:2009-02-03
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Multifunctionality and mechanism of ligand binding in a mosquito antiinflammatory protein
Proc.Natl.Acad.Sci.USA, 106, 2009
1T2C
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BU of 1t2c by Molmil
Plasmodium falciparum lactate dehydrogenase complexed with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GLYCEROL, L-lactate dehydrogenase
Authors:Cameron, A, Read, J, Tranter, R, Winter, V.J, Sessions, R.B, Brady, R.L, Vivas, L, Easton, A, Kendrick, H, Croft, S.L, Barros, D, Lavandera, J.L, Martin, J.J, Risco, F, Garcia-Ochoa, S, Gamo, F.J, Sanz, L, Leon, L, Ruiz, J.R, Gabarro, R, Mallo, A, De Las Heras, F.G.
Deposit date:2004-04-21
Release date:2004-05-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Identification and Activity of a Series of Azole-based Compounds with Lactate Dehydrogenase-directed Anti-malarial Activity.
J.Biol.Chem., 279, 2004
1W4U
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BU of 1w4u by Molmil
NMR solution structure of the ubiquitin conjugating enzyme UbcH5B
Descriptor: UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 2
Authors:Houben, K, Dominguez, C, Van Schaik, F.M.A, Timmers, H.T.M, Bonvin, A.M.J.J, Boelens, R.
Deposit date:2004-07-29
Release date:2004-11-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Ubiquitin-Conjugating Enzyme Ubch5B
J.Mol.Biol., 344, 2004
1W8S
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BU of 1w8s by Molmil
The mechanism of the Schiff Base Forming Fructose-1,6-bisphosphate Aldolase: Structural analysis of reaction intermediates
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I
Authors:Lorentzen, E, Hensel, R, Siebers, B, Pohl, E.
Deposit date:2004-09-27
Release date:2005-03-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of the Schiff base forming fructose-1,6-bisphosphate aldolase: structural analysis of reaction intermediates.
Biochemistry, 44, 2005
2ZE2
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BU of 2ze2 by Molmil
Crystal structure of L100I/K103N mutant HIV-1 reverse transcriptase (RT) in complex with TMC278 (rilpivirine), a non-nucleoside RT inhibitor
Descriptor: 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, Reverse transcriptase/ribonuclease H, p51 RT
Authors:Das, K, Bauman, J.D, Clark Jr, A.D, Shatkin, A.J, Arnold, E.
Deposit date:2007-12-05
Release date:2008-02-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:High-resolution structures of HIV-1 reverse transcriptase/TMC278 complexes: Strategic flexibility explains potency against resistance mutations.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1W9C
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BU of 1w9c by Molmil
Proteolytic fragment of CRM1 spanning six C-terminal HEAT repeats
Descriptor: CRM1 PROTEIN
Authors:Petosa, C, Schoehn, G, Askjaer, P, Bauer, U, Moulin, M, Steuerwald, U, Soler-Lopez, M, Baudin, F, Mattaj, I.W, Muller, C.W.
Deposit date:2004-10-08
Release date:2004-12-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Architecture of Crm1-Exportin 1 Suggests How Cooperativity is Achieved During Formation of a Nuclear Export Complex
Mol.Cell, 16, 2004

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