PDB: 98041 resultsInfo pagesStatus searchChemie searchBIRD

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1CA6	INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA Descriptor: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', CHROMOSOMAL PROTEIN SAC7D Authors: Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J. Deposit date: 1999-02-23 Release date: 2000-02-23 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs J.Mol.Biol., 303, 2000
4K1G	Structure of E. coli Nfo(Endo IV)-H69A mutant bound to a cleaved DNA duplex containing a alphadA:T basepair Descriptor: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*CP*C)-3'), ... Authors: Morera, S, Vigouroux, A. Deposit date: 2013-04-05 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases. Proc.Natl.Acad.Sci.USA, 110, 2013
4K8Z	KOD Polymerase in binary complex with dsDNA Descriptor: 1,2-ETHANEDIOL, COBALT HEXAMMINE(III), DNA (5'-D(*AP*AP*AP*TP*TP*CP*GP*CP*AP*GP*TP*TP*CP*GP*CP*G)-3'), ... Authors: Bergen, K, Betz, K, Welte, W, Diederichs, K, Marx, A. Deposit date: 2013-04-19 Release date: 2013-06-26 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.29 Å) Cite: Structures of KOD and 9N DNA Polymerases Complexed with Primer Template Duplex Chembiochem, 14, 2013
1XO5	Crystal structure of CIB1, an EF-hand, integrin and kinase-binding protein Descriptor: CALCIUM ION, Calcium and integrin-binding protein 1 Authors: Gentry, H.R, Singer, A.U, Betts, L, Yang, C, Ferrara, J.D, Parise, L.V, Sondek, J. Deposit date: 2004-10-05 Release date: 2004-12-07 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structural and Biochemical Characterization of CIB1 Delineates a New Family of EF-hand-containing Proteins J.Biol.Chem., 280, 2005
1SW6	S. CEREVISIAE SWI6 ANKYRIN-REPEAT FRAGMENT Descriptor: REGULATORY PROTEIN SWI6 Authors: Foord, R, Taylor, I.A, Sedgwick, S.G, Smerdon, S.J. Deposit date: 1998-09-28 Release date: 1999-09-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: X-ray structural analysis of the yeast cell cycle regulator Swi6 reveals variations of the ankyrin fold and has implications for Swi6 function. Nat.Struct.Biol., 6, 1999
1M71	Crystal structure of a Monoclonal Fab Specific for Shigella Flexneri Y lipopolysaccharide Descriptor: heavy chain of the monoclonal antibody Fab SYA/J6, light chain of the monoclonal antibody Fab SYA/J6 Authors: Vyas, N.K, Vyas, M.N, Chervenak, M.C, Johnson, M.A, Pinto, B.M, Bundle, D.R, Quiocho, F.A. Deposit date: 2002-07-18 Release date: 2003-07-22 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Molecular Recognition of Oligosaccharide Epitopes by a Monoclonal Fab Specific for Shigella flexneri Y Lipopolysaccharide: X-ray Structures and Thermodyanamics Biochemistry, 41, 2002
1GGJ	CRYSTAL STRUCTURE OF CATALASE HPII FROM ESCHERICHIA COLI, ASN201ALA VARIANT. Descriptor: CATALASE HPII, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE Authors: Melik-Adamyan, W.R, Bravo, J, Carpena, X, Switala, J, Mate, M.J, Fita, I, Loewen, P.C. Deposit date: 2000-08-21 Release date: 2000-08-30 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.92 Å) Cite: Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli. Proteins, 44, 2001
4DNB	METHYLATION OF THE ECORI RECOGNITION SITE DOES NOT ALTER DNA CONFORMATION. THE CRYSTAL STRUCTURE OF D(CGCGAM6ATTCGCG) AT 2.0 ANGSTROMS RESOLUTION Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*(6MA)P*TP*TP*CP*GP*CP*G)-3') Authors: Frederick, C.A, Quigley, G.J, Van Der Marel, G.A, Van Boom, J.H, Wang, A.H.-J, Rich, A. Deposit date: 1988-08-29 Release date: 1989-01-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: Methylation of the EcoRI recognition site does not alter DNA conformation: the crystal structure of d(CGCGAm6ATTCGCG) at 2.0-A resolution. J.Biol.Chem., 263, 1988
1PM7	RmlC (dTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE)STRUCTURE FROM MYCOBACTERIUM TUBERCULOSIS AND INHIBITOR DESIGN. THE APO STRUCTURE. Descriptor: ACETATE ION, GLYCEROL, RFBC Authors: Dong, C, Naismith, J.H, TB Structural Genomics Consortium (TBSGC) Deposit date: 2003-06-10 Release date: 2003-12-09 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Novel inhibitors of an emerging target in Mycobacterium tuberculosis; substituted thiazolidinones as inhibitors of dTDP-rhamnose synthesis. Bioorg.Med.Chem.Lett., 13, 2003
4DO2	Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution. Descriptor: Regulatory protein rop Authors: Amprazi, M, Kapetaniou, E.G, Kokkinidis, M. Deposit date: 2012-02-09 Release date: 2013-02-13 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.401 Å) Cite: Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. Proc.Natl.Acad.Sci.USA, 111, 2014
4KML	Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody Descriptor: Major prion protein, Nanobody Authors: Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J. Deposit date: 2013-05-08 Release date: 2014-02-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody. J.Am.Chem.Soc., 136, 2014
1LWH	CRYSTAL STRUCTURE OF T. MARITIMA 4-ALPHA-GLUCANOTRANSFERASE Descriptor: 4-alpha-glucanotransferase, CALCIUM ION Authors: Roujeinikova, A, Raasch, C, Sedelnikova, S, Liebl, W, Rice, D.W. Deposit date: 2002-05-31 Release date: 2002-07-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.6 Å) Cite: CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA 4-ALPHA-GLUCANOTRANSFERASE AND ITS ACARBOSE COMPLEX: IMPLICATIONS FOR SUBSTRATE SPECIFICITY AND CATALYSIS J.Mol.Biol., 321, 2002
3SNV	Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil architecture with symmetric primary structure Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Symfoil-4T/Permutation #1 synthetic protein Authors: Blaber, M, Longo, L, Lee, J. Deposit date: 2011-06-29 Release date: 2012-07-04 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Folding pathway redundancy in symmetric protein architecture To be Published
4NEH	An internal ligand-bound, metastable state of a leukocyte integrin, aXb2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Sen, M, Yuki, K, Springer, T.A. Deposit date: 2013-10-29 Release date: 2014-01-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.7505 Å) Cite: An internal ligand-bound, metastable state of a leukocyte integrin, alpha X beta 2. J.Cell Biol., 203, 2013
1REI	THE MOLECULAR STRUCTURE OF A DIMER COMPOSED OF THE VARIABLE PORTIONS OF THE BENCE-JONES PROTEIN REI REFINED AT 2.0 ANGSTROMS RESOLUTION Descriptor: BENCE-JONES PROTEIN REI (LIGHT CHAIN) Authors: Epp, O, Lattman, E.E, Colman, P, Fehlhammer, H, Bode, W, Schiffer, M, Huber, R, Palm, W. Deposit date: 1976-03-17 Release date: 1976-05-19 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: The molecular structure of a dimer composed of the variable portions of the Bence-Jones protein REI refined at 2.0-A resolution. Biochemistry, 14, 1975
1TAY	DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME Descriptor: HUMAN LYSOZYME Authors: Harata, K, Muraki, M, Jigami, Y. Deposit date: 1992-08-06 Release date: 1993-01-15 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme. Biochemistry, 31, 1992
1RI3	Structure and mechanism of mRNA cap (guanine N-7) methyltransferase Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, mRNA CAPPING ENZYME Authors: Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D. Deposit date: 2003-11-16 Release date: 2004-02-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase Mol.Cell, 13, 2004
4NH4	Structure of the binary complex of a zingiber officinale double bond reductase in complex with NADP Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Zingiber officinale double bond reductase Authors: Langlois D'Estaintot, B, Buratto, J, Granier, T, Gallois, B, Willis, M.A, Sang, Y, Flores-Sanchez, I.J, Gang, D.R. Deposit date: 2013-11-04 Release date: 2014-11-05 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure of zingiber officinale double bond reductase To be Published
1W6R	Complex of TcAChE with galanthamine derivative Descriptor: (-)-GALANTHAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ... Authors: Greenblatt, H.M, Guillou, C, Guenard, D, Badet, B, Thal, C, Silman, I, Sussman, J.L. Deposit date: 2004-08-23 Release date: 2004-11-25 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.05 Å) Cite: The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design. J.Am.Chem.Soc., 126, 2004
1GL2	Crystal structure of an endosomal SNARE core complex Descriptor: ENDOBREVIN, SYNTAXIN 7, SYNTAXIN 8, ... Authors: Antonin, W, Becker, S, Jahn, R, Schneider, T.R. Deposit date: 2001-08-22 Release date: 2002-01-15 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of the Endosomal Snare Complex Reveals Common Structural Principles of All Snares. Nat.Struct.Biol., 9, 2001
1MAL	STRUCTURAL BASIS FOR SUGAR TRANSLOCATION THROUGH MALTOPORIN CHANNELS AT 3.1 ANGSTROMS RESOLUTION Descriptor: MALTOPORIN Authors: Schirmer, T. Deposit date: 1994-11-24 Release date: 1995-12-31 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural basis for sugar translocation through maltoporin channels at 3.1 A resolution. Science, 267, 1995
1W75	Native Orthorhombic form of Torpedo californica acetylcholinesterase (AChE) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE Authors: Greenblatt, H.M, Botti, S, Argaman, A, Silman, I, Sussman, J.L. Deposit date: 2004-08-29 Release date: 2004-11-25 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design. J.Am.Chem.Soc., 126, 2004
4HW3	Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design Descriptor: 3-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1-benzothiophene-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1 Authors: Zhao, B. Deposit date: 2012-11-07 Release date: 2013-01-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. J.Med.Chem., 56, 2013
1R9Q	structure analysis of ProX in complex with proline betaine Descriptor: 1,1-DIMETHYL-PROLINIUM, Glycine betaine-binding periplasmic protein, UNKNOWN ATOM OR ION Authors: Schiefner, A, Breed, J, Bosser, L, Kneip, S, Gade, J, Holtmann, G, Diederichs, K, Welte, W, Bremer, E. Deposit date: 2003-10-30 Release date: 2004-02-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Cation-pi Interactions as Determinants for Binding of the Compatible Solutes Glycine Betaine and Proline Betaine by the Periplasmic Ligand-binding Protein ProX from Escherichia coli J.BIOL.CHEM., 279, 2004
4HW4	Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design Descriptor: Induced myeloid leukemia cell differentiation protein Mcl-1, Mcl-1 BH3 peptide Authors: Friberg, A, Zhao, B. Deposit date: 2012-11-07 Release date: 2013-01-09 Last modified: 2013-03-06 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. J.Med.Chem., 56, 2013

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