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6EQV
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BU of 6eqv by Molmil
X-ray structure of the proprotein convertase furin bound with the competitive inhibitor Phac-Cit-Val-Arg-Amba
Descriptor: CALCIUM ION, CHLORIDE ION, Furin, ...
Authors:Dahms, S.O, Than, M.E.
Deposit date:2017-10-16
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:X-ray Structures of the Proprotein Convertase Furin Bound with Substrate Analogue Inhibitors Reveal Substrate Specificity Determinants beyond the S4 Pocket.
Biochemistry, 57, 2018
1L85
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BU of 1l85 by Molmil
SIMILAR HYDROPHOBIC REPLACEMENTS OF LEU 99 AND PHE 153 WITHIN THE CORE OF T4 LYSOZYME HAVE DIFFERENT STRUCTURAL AND THERMODYNAMIC CONSEQUENCES
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Eriksson, A.E, Matthews, B.W.
Deposit date:1992-01-21
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Similar hydrophobic replacements of Leu99 and Phe153 within the core of T4 lysozyme have different structural and thermodynamic consequences.
J.Mol.Biol., 229, 1993
1T66
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BU of 1t66 by Molmil
The structure of FAB with intermediate affinity for fluorescein.
Descriptor: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, immunoglobulin heavy chain, immunoglobulin light chain
Authors:Terzyan, S, Ramsland, P.A, Voss Jr, E.W, Herron, J.N, Edmundson, A.B.
Deposit date:2004-05-05
Release date:2004-05-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-dimensional Structures of Idiotypically Related Fabs with Intermediate and High Affinity for Fluorescein.
J.Mol.Biol., 339, 2004
1T8Q
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BU of 1t8q by Molmil
Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
Descriptor: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, periplasmic, ...
Authors:Zhang, R, Kim, Y, Dementieva, I, Duke, N, Stols, L, Donnelly, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-13
Release date:2004-08-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
To be Published
4JF8
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BU of 4jf8 by Molmil
Crystal structure of a TrwG component of type IV secretion system protein from Bartonella birtlesii
Descriptor: 1,2-ETHANEDIOL, TrwG component of type IV secretion system
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-02-27
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Insight into How Bacteria Prevent Interference between Multiple Divergent Type IV Secretion Systems.
MBio, 6, 2015
3ZQZ
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BU of 3zqz by Molmil
CRYSTAL STRUCTURE OF ANCE IN COMPLEX WITH A SELENIUM ANALOGUE OF CAPTOPRIL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANGIOTENSIN-CONVERTING ENZYME, SELENO-CAPTOPRIL, ...
Authors:Akif, M, Masuyer, G, Schwager, S.L.U, Bhuyan, B.J, Mugesh, G, Isaac, R.E, Sturrock, E.D, Acharya, K.R.
Deposit date:2011-06-13
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Characterization of Angiotensin I- Converting Enzyme in Complex with a Selenium Analogue of Captopril.
FEBS J., 278, 2011
6EM4
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BU of 6em4 by Molmil
State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ...
Authors:Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
Deposit date:2017-10-01
Release date:2017-12-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
3OPQ
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BU of 3opq by Molmil
Phosphoribosylaminoimidazole carboxylase with fructose-6-phosphate bound to the central channel of the octameric protein structure.
Descriptor: CHLORIDE ION, FORMIC ACID, FRUCTOSE -6-PHOSPHATE, ...
Authors:Filippova, E.V, Wawrzak, Z, Kudritska, M, Edwards, A, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-01
Release date:2010-11-17
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phosphoribosylaminoimidazole carboxylase with fructose-6-phosphate bound to the central channel of the octameric protein structure.
To be Published
6EB4
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BU of 6eb4 by Molmil
OhrB (Organic Hydroperoxide Resistance protein) from Chromobacterium violaceum
Descriptor: DI(HYDROXYETHYL)ETHER, Organic hydroperoxide resistance protein
Authors:Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S.
Deposit date:2018-08-04
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
8DST
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BU of 8dst by Molmil
Cryo-EM of NBD-ffsy filaments (class 2)
Descriptor: NBD-ffsy peptide
Authors:Wang, F, Guo, J, Xu, B, Egelman, E.H.
Deposit date:2022-07-22
Release date:2023-05-31
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cell spheroid creation by transcytotic intercellular gelation.
Nat Nanotechnol, 18, 2023
6EBP
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BU of 6ebp by Molmil
Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae in Activated Form
Descriptor: CALCIUM ION, GLYCEROL, Ribonucleoside-diphosphate reductase, ...
Authors:Palowitch, G.M, Boal, A.K.
Deposit date:2018-08-06
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5CJ4
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BU of 5cj4 by Molmil
Crystal Structure of Amino Acids 1562-1622 of MYH7
Descriptor: Xrcc4-MYH7-(1562-1622) chimera protein
Authors:Korkmaz, N.E, Taylor, K.C, Andreas, M.P, Ajay, G, Heinze, N.T, Cui, Q, Rayment, I.
Deposit date:2015-07-13
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:A composite approach towards a complete model of the myosin rod.
Proteins, 84, 2016
200L
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BU of 200l by Molmil
THERMODYNAMIC AND STRUCTURAL COMPENSATION IN "SIZE-SWITCH" CORE-REPACKING VARIANTS OF T4 LYSOZYME
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME
Authors:Baldwin, E, Xu, J, Hajiseyedjavadi, O, Matthews, B.W.
Deposit date:1995-11-06
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Thermodynamic and structural compensation in "size-switch" core repacking variants of bacteriophage T4 lysozyme.
J.Mol.Biol., 259, 1996
8EC3
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BU of 8ec3 by Molmil
The crystal structure of the complement inhibitory domain of Borrelia hermsii FbpC.
Descriptor: Fibronectin-binding protein, MAGNESIUM ION
Authors:Booth, C.E, Garcia, B.L.
Deposit date:2022-09-01
Release date:2023-06-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational dynamics of complement protease C1r inhibitor proteins from Lyme disease- and relapsing fever-causing spirochetes.
J.Biol.Chem., 299, 2023
7P8O
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BU of 7p8o by Molmil
Crystal structure of D-aminoacid transaminase from Haliscomenobacter hydrossis in its intermediate form
Descriptor: Aminotransferase class IV, MAGNESIUM ION, SULFATE ION
Authors:Matyuta, I.O, Boyko, K.M, Bakunova, A.K, Nikolaeva, A.Y, Rakitina, T.V, Bezsudnova, E.Y, Popov, V.O.
Deposit date:2021-07-23
Release date:2022-08-03
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of D-aminoacid transaminase from Haliscomenobacter hydrossis in its apo form
To Be Published
8E5G
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BU of 8e5g by Molmil
Cryo-EM of A. veneficus cytochrome filament
Descriptor: HEME C, c-type cytochrome
Authors:Wang, F, Baquero, D.P, Krupovic, M, Egelman, E.H.
Deposit date:2022-08-22
Release date:2023-05-10
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Extracellular cytochrome nanowires appear to be ubiquitous in prokaryotes.
Cell, 186, 2023
5GRK
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BU of 5grk by Molmil
Crystal structure of Uracil DNA glycosylase -Xanthine complex from Bradyrhizobium diazoefficiens
Descriptor: Blr0248 protein, XANTHINE
Authors:Patil, V.V, Ullas, V.C, Ahn, W, Varshney, U, Woo, E.
Deposit date:2016-08-11
Release date:2017-05-03
Last modified:2017-06-14
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Uracil DNA glycosylase (UDG) activities in Bradyrhizobium diazoefficiens: characterization of a new class of UDG with broad substrate specificity
Nucleic Acids Res., 45, 2017
1CVW
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BU of 1cvw by Molmil
Crystal structure of active site-inhibited human coagulation factor VIIA (DES-GLA)
Descriptor: CALCIUM ION, COAGULATION FACTOR VIIA (HEAVY CHAIN) (DES-GLA), COAGULATION FACTOR VIIA (LIGHT CHAIN) (DES-GLA), ...
Authors:Kemball-Cook, G, Johnson, D.J.D, Tuddenham, E.G.D, Harlos, K.
Deposit date:1999-08-24
Release date:1999-08-31
Last modified:2013-02-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of active site-inhibited human coagulation factor VIIa (des-Gla).
J.Struct.Biol., 127, 1999
7PB3
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BU of 7pb3 by Molmil
Structural and Functional analysis of the Proline Racemase (ProR) from the Gram-positive bacterium Acetoanaerobium sticklandii
Descriptor: PYRROLE-2-CARBOXYLATE, Proline racemase A (AsProR)
Authors:Najmudin, S, Pan, X.-S, McAuley, K.E, Fisher, L.M, Sanderson, M.R.
Deposit date:2021-07-30
Release date:2022-08-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Structural and Functional analysis of the Proline Racemase (ProR) from the Gram-positive bacterium Acetoanaerobium sticklandii
To Be Published
3J9G
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BU of 3j9g by Molmil
Atomic model of the VipA/VipB, the type six secretion system contractile sheath of Vibrio cholerae from cryo-EM
Descriptor: VipA, VipB
Authors:Kudryashev, M, Wang, R.Y.-R, Brackmann, M, Scherer, S, Maier, T, Baker, D, DiMaio, F, Stahlberg, H, Egelman, E.H, Basler, M.
Deposit date:2015-01-16
Release date:2015-03-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the Type VI Secretion System Contractile Sheath.
Cell(Cambridge,Mass.), 160, 2015
4QUY
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BU of 4quy by Molmil
yCP beta5-A49S-mutant
Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-14
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
7ON8
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BU of 7on8 by Molmil
Crystal structure of the computationally designed SAKe6AR protein
Descriptor: SAKe6AR
Authors:Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
1LE4
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BU of 1le4 by Molmil
STRUCTURAL BASIS FOR ALTERED FUNCTION IN THE COMMON MUTANTS OF HUMAN APOLIPOPROTEIN-E
Descriptor: APOLIPOPROTEIN E4
Authors:Wilson, C, Agard, D.A.
Deposit date:1991-08-22
Release date:1992-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human apolipoprotein E. Role of arginine 61 in mediating the lipoprotein preferences of the E3 and E4 isoforms.
J.Biol.Chem., 269, 1994
7OPU
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BU of 7opu by Molmil
Self-assembled crystal structure of the computationally designed SAKe6BE-3HH protein
Descriptor: SAKe6BE-3HH
Authors:Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-06-01
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
6EJ9
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BU of 6ej9 by Molmil
Human Xylosyltransferase 1 in complex with peptide QEPEGSGGGQGG
Descriptor: PHOSPHATE ION, Protein AMBP, SODIUM ION, ...
Authors:Briggs, D.C, Hohenester, E.
Deposit date:2017-09-20
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1.
Structure, 26, 2018

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