Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7P0G
DownloadVisualize
BU of 7p0g by Molmil
URATE OXIDASE WITH 8-AZAXANTHINE UNDER AMBIENT PRESSURE
Descriptor: 8-AZAXANTHINE, SODIUM ION, Uricase
Authors:Colloc'h, N, Prange, T, Girard, E.
Deposit date:2021-06-29
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
4J2H
DownloadVisualize
BU of 4j2h by Molmil
Crystal structure of a putative short-chain alcohol dehydrogenase from Sinorhizobium meliloti 1021 (Target NYSGRC-011708)
Descriptor: 1,2-ETHANEDIOL, PENTAETHYLENE GLYCOL, SODIUM ION, ...
Authors:Sampathkumar, P, Gizzi, A, Ahmed, M, Banu, N, Bhosle, R, Bonanno, J, Chamala, S, Chowdhury, S, Fiser, A, Glenn, A.S, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Love, J.D, Stead, M, Seidel, R, Toro, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-02-04
Release date:2013-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative short-chain alcohol dehydrogenase from Sinorhizobium meliloti 1021 (Target NYSGRC-011708)
to be published
7P0C
DownloadVisualize
BU of 7p0c by Molmil
URATE OXIDASE WITH 8-AZAXANTHINE UNDER 210 MPA PRESSURE
Descriptor: 8-AZAXANTHINE, SODIUM ION, Uricase
Authors:Colloc'h, N, Prange, T, Girard, E.
Deposit date:2021-06-29
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
4J39
DownloadVisualize
BU of 4j39 by Molmil
Crystal structure of p19 in complex with double-helical 19mer RNA p(CAG)3C(CUG)3
Descriptor: 5'-R(P*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3', RNA silencing suppressor p19, SULFATE ION
Authors:Tamjar, J, Popov, A.N, Malinina, L.
Deposit date:2013-02-05
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Procrustean bed of RNA silencing suppression
To be Published
3WF2
DownloadVisualize
BU of 3wf2 by Molmil
Crystal structure of human beta-galactosidase in complex with NBT-DGJ
Descriptor: (2R,3S,4R,5S)-N-butyl-3,4,5-trihydroxy-2-(hydroxymethyl)piperidine-1-carbothioamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, H, Ohto, U, Shimizu, T.
Deposit date:2013-07-16
Release date:2014-04-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of pharmacological chaperoning for human beta-galactosidase
to be published
4IF5
DownloadVisualize
BU of 4if5 by Molmil
Structure of human Mec17
Descriptor: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase, CHLORIDE ION
Authors:Davenport, A.M, Collins, L, Minor, P, Sternberg, P, Hoelz, A.
Deposit date:2012-12-14
Release date:2014-05-28
Last modified:2014-07-02
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characterization of the alpha-Tubulin Acetyltransferase MEC-17.
J.Mol.Biol., 426, 2014
4ILQ
DownloadVisualize
BU of 4ilq by Molmil
2.60A resolution structure of CT771 from Chlamydia trachomatis
Descriptor: CT771, GLYCEROL, SULFATE ION
Authors:Barta, M.L, Lovell, S, Battaile, K.P, Hefty, P.S.
Deposit date:2012-12-31
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Chlamydia trachomatis CT771 (nudH) Is an Asymmetric Ap4A Hydrolase.
Biochemistry, 53, 2014
4IJW
DownloadVisualize
BU of 4ijw by Molmil
Crystal structure of 11b-HSD1 double mutant (L262R, F278E) in complex with 3-[1-(4-chlorophenyl)cyclopropyl]-8-cyclopropyl[1,2,4]triazolo[4,3-a]pyridine
Descriptor: 3-[1-(4-chlorophenyl)cyclopropyl]-8-cyclopropyl[1,2,4]triazolo[4,3-a]pyridine, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Sheriff, S.
Deposit date:2012-12-23
Release date:2014-06-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Optimization of 1,2,4-Triazolopyridines as Inhibitors of Human 11 beta-Hydroxysteroid Dehydrogenase Type 1 (11 beta-HSD-1).
ACS Med Chem Lett, 5, 2014
3WK2
DownloadVisualize
BU of 3wk2 by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
Descriptor: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
7P9Q
DownloadVisualize
BU of 7p9q by Molmil
Crystal structure of Indole 3-Carboxylic acid decarboxylase from Arthrobacter nicotianae FI1612 in complex with co-factor prFMN.
Descriptor: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, AnInD, MANGANESE (II) ION, ...
Authors:Gahloth, D, Leys, D.
Deposit date:2021-07-27
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural and biochemical characterization of the prenylated flavin mononucleotide-dependent indole-3-carboxylic acid decarboxylase.
J.Biol.Chem., 298, 2022
3WVG
DownloadVisualize
BU of 3wvg by Molmil
Time-Resolved Crystal Structure of HindIII with 0sec soaking
Descriptor: DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, SODIUM ION, ...
Authors:Kawamura, T, Kobayashi, T, Watanabe, N.
Deposit date:2014-05-21
Release date:2015-04-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
3WPH
DownloadVisualize
BU of 3wph by Molmil
Crystal structure of mouse TLR9 in complex with inhibitory DNA4084 (form 2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (5'-D(*CP*CP*TP*GP*GP*AP*TP*GP*GP*GP*AP*A)-3'), SULFATE ION, ...
Authors:Ohto, U, Shimizu, T.
Deposit date:2014-01-11
Release date:2015-02-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.327 Å)
Cite:Structural basis of CpG and inhibitory DNA recognition by Toll-like receptor 9
Nature, 520, 2015
4M09
DownloadVisualize
BU of 4m09 by Molmil
Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W146Y R173Q
Descriptor: 1,2-ETHANEDIOL, Chlorite dismutase, IMIDAZOLE, ...
Authors:Gysel, K, Hagmueller, A, Djinovic-Carugo, K.
Deposit date:2013-08-01
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Manipulating conserved heme cavity residues of chlorite dismutase: effect on structure, redox chemistry, and reactivity.
Biochemistry, 53, 2014
8BDO
DownloadVisualize
BU of 8bdo by Molmil
VCB in complex with compound 21
Descriptor: (2~{S},4~{R})-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-~{N}-[4-(4-methyl-1,3-thiazol-5-yl)phenoxy]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
Deposit date:2022-10-19
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
4IN0
DownloadVisualize
BU of 4in0 by Molmil
Crystal Structure of human splicing factor dim2/TXNL4B
Descriptor: Thioredoxin-like protein 4B, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Jin, T.C, Guo, F, Zhang, Y.Z.
Deposit date:2013-01-03
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.327 Å)
Cite:High-resolution crystal structure of human Dim2/TXNL4B.
Acta Crystallogr.,Sect.F, 69, 2013
4INA
DownloadVisualize
BU of 4ina by Molmil
Crystal Structure of the Q7MSS8_WOLSU protein from Wolinella succinogenes. Northeast Structural Genomics Consortium Target WsR35
Descriptor: saccharopine dehydrogenase
Authors:Vorobiev, S, Su, M, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-01-04
Release date:2013-01-16
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.488 Å)
Cite:Crystal Structure of the Q7MSS8_WOLSU protein from Wolinella succinogenes.
To be Published
8BDL
DownloadVisualize
BU of 8bdl by Molmil
VCB in complex with compound 27
Descriptor: (2~{S},4~{R})-~{N}-[(1~{S})-1-[2-(2-methoxyethoxy)-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
Deposit date:2022-10-19
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
4M7S
DownloadVisualize
BU of 4m7s by Molmil
Crystal structure of SeMet BtrN in an OPEN conformation
Descriptor: BtrN, GLYCEROL, IMIDAZOLE, ...
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2013-08-12
Release date:2013-10-02
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.
Proc.Natl.Acad.Sci.USA, 110, 2013
8BDJ
DownloadVisualize
BU of 8bdj by Molmil
VCB in complex with compound 30
Descriptor: (2~{S},4~{R})-~{N}-[(1~{S})-1-[4-chloranyl-2-(2-methoxyethoxy)phenyl]ethyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
Deposit date:2022-10-19
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
3WQP
DownloadVisualize
BU of 3wqp by Molmil
Crystal structure of Rubisco T289D mutant from Thermococcus kodakarensis
Descriptor: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Fujihashi, M, Nishitani, Y, Kiriyama, T, Miki, K.
Deposit date:2014-01-29
Release date:2015-02-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutation design of thermophilic Rubisco based on the three-dimensional structure enhances its activity at ambient temperature
to be published
4IGM
DownloadVisualize
BU of 4igm by Molmil
2.39 Angstrom X-ray Crystal structure of human ACMSD
Descriptor: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, ZINC ION
Authors:Liu, F, Liu, A.
Deposit date:2012-12-17
Release date:2014-05-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.391 Å)
Cite:2.39 Angstrom X-ray Crystal structure of human ACMSD
To be Published
4IJU
DownloadVisualize
BU of 4iju by Molmil
Crystal structure of 11b-HSD1 double mutant (L262R, F278E) in complex with (1S,4S)-4-[8-(2-fluorophenoxy)[1,2,4]triazolo[4,3-a]pyridin-3-yl]bicyclo[2.2.1]heptan-1-ol
Descriptor: (1s,4s)-4-[8-(2-fluorophenoxy)[1,2,4]triazolo[4,3-a]pyridin-3-yl]bicyclo[2.2.1]heptan-1-ol, CHLORIDE ION, Corticosteroid 11-beta-dehydrogenase isozyme 1, ...
Authors:Sheriff, S.
Deposit date:2012-12-23
Release date:2014-06-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Optimization of 1,2,4-Triazolopyridines as Inhibitors of Human 11 beta-Hydroxysteroid Dehydrogenase Type 1 (11 beta-HSD-1).
ACS Med Chem Lett, 5, 2014
4MDN
DownloadVisualize
BU of 4mdn by Molmil
Structure of a novel submicromolar MDM2 inhibitor
Descriptor: 3-{(1S)-2-(tert-butylamino)-1-[{4-[(4-chlorobenzyl)oxy]benzyl}(formyl)amino]-2-oxoethyl}-6-chloro-1H-indole-2-carboxylic acid, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
Authors:Bista, M, Popowicz, G, Holak, T.A.
Deposit date:2013-08-23
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.905 Å)
Cite:Transient Protein States in Designing Inhibitors of the MDM2-p53 Interaction.
Structure, 21, 2013
4MDT
DownloadVisualize
BU of 4mdt by Molmil
Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine
Descriptor: PHOSPHATE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION, ...
Authors:Clayton, G.M, Klein, D.J, Rickert, K.W, Patel, S.B, Kornienko, M, Zugay-Murphy, J, Reid, J.C, Tummala, S, Sharma, S, Singh, S.B, Miesel, L, Lumb, K.J, Soisson, S.M.
Deposit date:2013-08-23
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of the Bacterial Deacetylase LpxC Bound to the Nucleotide Reaction Product Reveals Mechanisms of Oxyanion Stabilization and Proton Transfer.
J.Biol.Chem., 288, 2013
4LPL
DownloadVisualize
BU of 4lpl by Molmil
Structure of CBM32-1 from a family 31 glycoside hydrolase from Clostridium perfringens
Descriptor: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein, ...
Authors:Grondin, J.M, Duan, D, Heather, F.S, Spencer, C.A, Allingham, J.S, Smith, S.P.
Deposit date:2013-07-16
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
Plos One, 12, 2017

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon