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3HZM
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Crystal structure of S73-2 antibody in complex with antigen Kdo
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, MAGNESIUM ION, S73-2 Fab (IgG1k) heavy chain, ...
Authors:Brooks, C.L, Muller-Loennies, S, Borisova, S.N, Brade, L, Kosma, P, Hirama, T, MacKenzie, C.R, Brade, H, Evans, S.V.
Deposit date:2009-06-23
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Antibodies raised against chlamydial lipopolysaccharide antigens reveal convergence in germline gene usage and differential epitope recognition
Biochemistry, 49, 2010
3HY1
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Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with SerSA
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-HYDROXYETHYL DISULFIDE, 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, ...
Authors:Guo, M, Yang, X.-L, Schimmel, P.
Deposit date:2009-06-22
Release date:2009-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma.
Nature, 462, 2009
3HZU
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BU of 3hzu by Molmil
Crystal structure of probable thiosulfate sulfurtransferase SSEA (rhodanese) from Mycobacterium tuberculosis
Descriptor: GLYCEROL, SULFATE ION, Thiosulfate sulfurtransferase sseA
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-06-24
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mycobacterium thermoresistibile as a source of thermostable orthologs of Mycobacterium tuberculosis proteins.
Protein Sci., 21, 2012
3HYP
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BU of 3hyp by Molmil
Crystal structure of Bacteroides fragilis TrxP_S105G mutant
Descriptor: Thioredoxin, ZINC ION
Authors:Shouldice, S.R.
Deposit date:2009-06-22
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:In vivo oxidative protein folding can be facilitated by oxidation-reduction cycling
Mol.Microbiol., 75, 2010
3I06
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BU of 3i06 by Molmil
Crystal structure of cruzain covalently bound to a purine nitrile
Descriptor: 6-[(3,5-difluorophenyl)amino]-9-ethyl-9H-purine-2-carbonitrile, Cruzipain
Authors:Ferreira, R.S, Shoichet, B.K, McKerrow, J.H.
Deposit date:2009-06-24
Release date:2009-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Identification and optimization of inhibitors of trypanosomal cysteine proteases: cruzain, rhodesain, and TbCatB.
J.Med.Chem., 53, 2010
3I0F
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BU of 3i0f by Molmil
Crystal structure of GTB C80S/C196S + UDP + H antigen
Descriptor: ABO glycosyltransferase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V.
Deposit date:2009-06-25
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding
J.Mol.Biol., 402, 2010
3HZT
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BU of 3hzt by Molmil
Crystal structure of Toxoplasma gondii CDPK3, TGME49_105860
Descriptor: 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE, Calcium-dependent protein kinase 3, GLYCEROL, ...
Authors:Wernimont, A.K, Artz, J.D, Finnerty, P, Wasney, G, Allali-Hassani, A, Vedadi, M, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2009-06-24
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of apicomplexan calcium-dependent protein kinases reveal mechanism of activation by calcium.
Nat.Struct.Mol.Biol., 17, 2010
3I15
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Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 fully oxidized
Descriptor: Beta-lactamase 2, COBALT (II) ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I0D
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BU of 3i0d by Molmil
Crystal structure of GTB C80S/C196S + UDP
Descriptor: ABO glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V.
Deposit date:2009-06-25
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding
J.Mol.Biol., 402, 2010
3I0I
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Crystal structure of GTB C80S/C196S/C209S + UDP
Descriptor: ABO glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V.
Deposit date:2009-06-25
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding
J.Mol.Biol., 402, 2010
3I0W
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BU of 3i0w by Molmil
Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in complex with dsDNA containing cytosine opposite to 8-oxoG
Descriptor: 1,2-ETHANEDIOL, 5'-D(*AP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*A)-3', ...
Authors:Faucher, F, Doublie, S.
Deposit date:2009-06-25
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural basis for the lack of opposite base specificity of Clostridium acetobutylicum 8-oxoguanine DNA glycosylase.
Dna Repair, 8, 2009
3I2D
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BU of 3i2d by Molmil
Crystal Structure of S. Cerevisiae SUMO E3 Ligase SIZ1
Descriptor: E3 SUMO-protein ligase SIZ1, ZINC ION
Authors:Lima, C.D, Yunus, A.A.
Deposit date:2009-06-29
Release date:2009-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Siz/PIAS SUMO E3 ligase Siz1 and determinants required for SUMO modification of PCNA.
Mol.Cell, 35, 2009
3I1I
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BU of 3i1i by Molmil
X-ray crystal structure of homoserine O-acetyltransferase from Bacillus anthracis
Descriptor: ACETATE ION, GLYCEROL, Homoserine O-acetyltransferase, ...
Authors:Osipiuk, J, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-06-26
Release date:2009-07-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:X-ray crystal structure of homoserine O-acetyltransferase from Bacillus anthracis.
To be published
3GBB
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BU of 3gbb by Molmil
X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution
Descriptor: (2R,3aR,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, Glutamate receptor, ionotropic kainate 1
Authors:Frydenvang, K, Naur, P, Gajhede, M, Kastrup, J.S.
Deposit date:2009-02-19
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Full Domain Closure of the Ligand-binding Core of the Ionotropic Glutamate Receptor iGluR5 Induced by the High Affinity Agonist Dysiherbaine and the Functional Antagonist 8,9-Dideoxyneodysiherbaine
J.Biol.Chem., 284, 2009
3GIJ
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Dpo4 extension ternary complex with oxoG(syn)-A(anti) and oxoG(anti)-A(syn) pairs
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3', ...
Authors:Rechkoblit, O, Malinina, L, Patel, D.J.
Deposit date:2009-03-05
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Structure, 17, 2009
3G7P
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BU of 3g7p by Molmil
Crystal structure of a nifx-associated protein of unknown function (afe_1514) from acidithiobacillus ferrooxidans atcc at 2.00 A resolution
Descriptor: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Nitrogen fixation protein, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-02-10
Release date:2009-03-03
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of NifX-associated protein of unknown function (YP_002425942.1) from Acidithiobacillus ferrooxidans ATCC 23270 at 2.00 A resolution
To be published
3G81
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BU of 3g81 by Molmil
Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with alpha methyl mannoside
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, methyl alpha-D-mannopyranoside
Authors:Head, J.F.
Deposit date:2009-02-11
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Recognition of mannosylated ligands and influenza A virus by human surfactant protein D: contributions of an extended site and residue 343.
Biochemistry, 48, 2009
3GF4
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BU of 3gf4 by Molmil
Structure of UDP-galactopyranose mutase bound to UDP-glucose
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, UDP-galactopyranose mutase, URIDINE-5'-DIPHOSPHATE-GLUCOSE, ...
Authors:Gruber, T.D, Borrok, M.J, Kiessling, L.L, Forest, K.T.
Deposit date:2009-02-26
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Ligand binding and substrate discrimination by UDP-galactopyranose mutase.
J.Mol.Biol., 391, 2009
3GFQ
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BU of 3gfq by Molmil
Structure of YhdA, K109L variant
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-dependent NADPH-azoreductase
Authors:Staunig, N, Gruber, K.
Deposit date:2009-02-27
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.996 Å)
Cite:A single intersubunit salt bridge affects oligomerization and catalytic activity in a bacterial quinone reductase
Febs J., 276, 2009
3GG5
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BU of 3gg5 by Molmil
Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability
Descriptor: PHOSPHATE ION, SULFATE ION, Thymidylate synthase
Authors:Huang, X, Gibson, L.M, Bell, B.J, Lovelace, L.L, Lebioda, L.
Deposit date:2009-02-27
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability .
Biochemistry, 49, 2010
3G9Y
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BU of 3g9y by Molmil
Crystal structure of the second zinc finger from ZRANB2/ZNF265 bound to 6 nt ssRNA sequence AGGUAA
Descriptor: RNA (5'-R(*AP*GP*GP*UP*AP*A)-3'), ZINC ION, Zinc finger Ran-binding domain-containing protein 2
Authors:Loughlin, F.E, McGrath, A.P, Lee, M, Guss, J.M, Mackay, J.P.
Deposit date:2009-02-15
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The zinc fingers of the SR-like protein ZRANB2 are single-stranded RNA-binding domains that recognize 5' splice site-like sequences
Proc.Natl.Acad.Sci.USA, 106, 2009
3GGY
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BU of 3ggy by Molmil
Crystal Structure of S.cerevisiae Ist1 N-terminal domain
Descriptor: Increased sodium tolerance protein 1
Authors:Xiao, J, Xu, Z.
Deposit date:2009-03-02
Release date:2009-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of Ist1 function and Ist1-Did2 interaction in the multivesicular body pathway and cytokinesis.
MOLECULAR BIOLOGY OF THE CELL, 20, 2009
3GAE
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BU of 3gae by Molmil
Crystal Structure of PUL
Descriptor: CHLORIDE ION, GLYCEROL, Protein DOA1
Authors:Zhao, G, Schindelin, H, Lennarz, W.J.
Deposit date:2009-02-17
Release date:2009-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation
Proc.Natl.Acad.Sci.USA, 106, 2009
3GAN
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BU of 3gan by Molmil
Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, CHLORIDE ION, Uncharacterized protein At3g22680
Authors:Burgie, E.S, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-02-17
Release date:2009-03-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin
To be Published
3GHZ
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2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Salmonella typhimurium
Descriptor: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, GLYCEROL, MAGNESIUM ION, ...
Authors:Osipiuk, J, Gu, M, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-03-04
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:X-ray crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Salmonella typhimurium.
To be Published

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