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2IC3
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BU of 2ic3 by Molmil
Crystal Structure of K103N/Y181C Mutant HIV-1 Reverse Transcriptase (RT) in Complex with Nonnucleoside Inhibitor HBY 097
Descriptor: (S)-4-ISOPROPOXYCARBONYL-6-METHOXY-3-METHYLTHIOMETHYL-3,4-DIHYDROQUINOXALIN-2(1H)-THIONE, MANGANESE (II) ION, Reverse transcriptase/ribonuclease H (p51 RT), ...
Authors:Das, K, Arnold, E.
Deposit date:2006-09-12
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structures of Clinically Relevant Lys103Asn/Tyr181Cys Double Mutant HIV-1 Reverse Transcriptase in Complexes with ATP and Non-nucleoside Inhibitor HBY 097.
J.Mol.Biol., 365, 2007
2IEJ
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BU of 2iej by Molmil
Human Protein Farnesyltransferase Complexed with Inhibitor Compound STN-48 And FPP Analog at 1.8A Resolution
Descriptor: ACETATE ION, METHYL N-{(3S)-1-[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]-6-PHENYL-1,2,3,4-TETRAHYDROQUINOLIN-3-YL}-N-[(1-METHYL-1H-IMIDAZOL-4-YL)SULFONYL]GLYCINATE, Protein farnesyltransferase subunit beta, ...
Authors:Hast, M.A, Beese, L.S.
Deposit date:2006-09-19
Release date:2007-01-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Resistance mutations at the lipid substrate binding site of Plasmodium falciparum protein farnesyltransferase.
Mol.Biochem.Parasitol., 152, 2007
2GT4
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BU of 2gt4 by Molmil
Crystal Structure of the Y103F mutant of the GDP-mannose mannosyl hydrolase in complex with GDP-mannose and MG+2
Descriptor: GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, MAGNESIUM ION, ...
Authors:Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, Mildvan, A.S, Amzel, L.A.
Deposit date:2006-04-27
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction.
Biochemistry, 45, 2006
2GTN
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BU of 2gtn by Molmil
Mutated MAP kinase P38 (Mus Musculus) in complex with Inhbitor PG-951717
Descriptor: 2-(2,6-DIFLUOROPHENOXY)-N-(2-FLUOROPHENYL)-9-ISOPROPYL-9H-PURIN-8-AMINE, Mitogen-activated protein kinase 14, SULFATE ION
Authors:Walter, R.L, Mekel, M.J, Evdokimov, A.G, Pokross, M.E, Sabat, M.
Deposit date:2006-04-28
Release date:2006-07-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The development of novel C-2, C-8, and N-9 trisubstituted purines as inhibitors of TNF-alpha production.
Bioorg.Med.Chem.Lett., 16, 2006
2GX6
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BU of 2gx6 by Molmil
Rational stabilization of E. coli ribose binding protein
Descriptor: D-ribose-binding periplasmic protein, beta-D-ribopyranose
Authors:Cuneo, M.J, Hellinga, H.W.
Deposit date:2006-05-08
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Rational stabilization of E. coli ribose binding protein
To be Published
2GWS
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BU of 2gws by Molmil
Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminus
Descriptor: 1,2-ETHANEDIOL, 5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*G)-3', ...
Authors:Garcia-Diaz, M, Picher, A.J, Bebenek, K, Pedersen, L.C, Kunkel, T.A, Blanco, L.
Deposit date:2006-05-05
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Promiscuous mismatch extension by human DNA polymerase lambda.
Nucleic Acids Res., 34, 2006
2GYK
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BU of 2gyk by Molmil
Crystal structure of the complex of the Colicin E9 DNase domain with a mutant immunity protein, IMME9 (D51A)
Descriptor: Colicin-E9, Colicin-E9 immunity protein, PHOSPHATE ION, ...
Authors:Santi, P.S, Kolade, O.O, Kuhlmann, U.C, Hemmings, A.M.
Deposit date:2006-05-09
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the complexes of the Colicin E9 DNase domain with mutant immunity proteins
To be Published
2GZJ
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BU of 2gzj by Molmil
Crystal Structure of the E9 DNase Domain with a Mutant Immunity Protein IM9 (D51A)
Descriptor: Colicin-E9, Colicin-E9 immunity protein, PHOSPHATE ION, ...
Authors:Santi, P.S, Kolade, O.O, Kuhlmann, U.C, Kleanthous, C, Hemmings, A.M.
Deposit date:2006-05-11
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Complex of the Colicin E9 DNase Domain with a Mutant Immunity Protein, IM9 (D51A)
To be Published
2H1Y
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BU of 2h1y by Molmil
Crystal structure of malonyl-CoA:Acyl carrier protein transacylase (MCAT) from Helicobacter pylori
Descriptor: Malonyl coenzyme A-acyl carrier protein transacylase
Authors:Zhang, L, Liu, W, Shen, X, Jiang, H.
Deposit date:2006-05-17
Release date:2007-05-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Malonyl-CoA: acyl carrier protein transacylase from Helicobacter pylori: Crystal structure and its interaction with acyl carrier protein
Protein Sci., 16, 2007
2H4P
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BU of 2h4p by Molmil
Crystal structure of wildtype MENT in the cleaved conformation
Descriptor: Heterochromatin-associated protein MENT
Authors:Buckle, A.M, McGowan, S, Irving, J.A, Whisstock, J.C.
Deposit date:2006-05-24
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation.
Embo J., 25, 2006
2H2Q
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BU of 2h2q by Molmil
Crystal structure of Trypanosoma cruzi Dihydrofolate Reductase-Thymidylate synthase
Descriptor: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Senkovich, O, Schormann, N, Chattopadhyay, D.
Deposit date:2006-05-19
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based approach to pharmacophore identification, in silico screening, and three-dimensional quantitative structure-activity relationship studies for inhibitors of Trypanosoma cruzi dihydrofolate reductase function.
Proteins, 73, 2008
2HBN
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BU of 2hbn by Molmil
Crystallization of the Tl+-form of the Oxytricha nova G-quadruplex
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', THALLIUM (I) ION
Authors:Gill, M.L, Strobel, S.A, Loria, J.P.
Deposit date:2006-06-14
Release date:2006-09-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystallization and characterization of the thallium form of the Oxytricha nova G-quadruplex.
Nucleic Acids Res., 34, 2006
2HC8
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BU of 2hc8 by Molmil
Structure of the A. fulgidus CopA A-domain
Descriptor: Cation-transporting ATPase, P-type
Authors:Sazinsky, M.H, Agawal, S, Arguello, J.M, Rosenzweig, A.C.
Deposit date:2006-06-15
Release date:2006-09-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the Actuator Domain from the Archaeoglobus fulgidus Cu(+)-ATPase(,).
Biochemistry, 45, 2006
2HDS
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BU of 2hds by Molmil
AmpC beta-lactamase in complex with 4-Methanesulfonylamino benzoic acid
Descriptor: 4-[(METHYLSULFONYL)AMINO]BENZOIC ACID, Beta-lactamase, PHOSPHATE ION, ...
Authors:Babaoglu, K, Shoichet, B.K.
Deposit date:2006-06-20
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Deconstructing fragment-based inhibitor discovery
Nat.Chem.Biol., 2, 2006
6XEY
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BU of 6xey by Molmil
Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-4
Descriptor: 2-4 Heavy Chain, 2-4 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rapp, M, Shapiro, L, Ho, D.D.
Deposit date:2020-06-14
Release date:2020-07-22
Last modified:2021-01-27
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Potent neutralizing antibodies against multiple epitopes on SARS-CoV-2 spike.
Nature, 584, 2020
2GNA
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BU of 2gna by Molmil
Crystal structure of UDP-GlcNAc inverting 4,6-dehydratase in complex with NADP and UDP-Gal
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GALACTOSE-URIDINE-5'-DIPHOSPHATE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Ishiyama, N, Creuzenet, C, Lam, J.S, Berghuis, A.M.
Deposit date:2006-04-09
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Studies of FlaA1 from Helicobacter pylori Reveal the Mechanism for Inverting 4,6-Dehydratase Activity.
J.Biol.Chem., 281, 2006
2GP7
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BU of 2gp7 by Molmil
Estrogen Related Receptor-gamma ligand binding domain
Descriptor: CALCIUM ION, Estrogen-related receptor gamma
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-17
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
2HE7
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BU of 2he7 by Molmil
FERM domain of EPB41L3 (DAL-1)
Descriptor: Band 4.1-like protein 3
Authors:Hallberg, B.M, Busam, R.D, Arrowsmith, C, Berglund, H, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Schiavone, L.H, Johansson, I, Hogbom, M, Karlberg, T, Kotenyova, T, Nilvebrandt, J, Norberg, P, Stenmark, P, Nordlund, P, Nilsson-ehle, P, Nyman, T, Ogg, D, Sagemark, J, Sundstrom, M, Uppenberg, J, Van den berg, S, Weigelt, J, Persson, C, Thorsell, A.G, Structural Genomics Consortium (SGC)
Deposit date:2006-06-21
Release date:2006-07-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of tumor suppressor in lung cancer 1 (TSLC1) binding to differentially expressed in adenocarcinoma of the lung (DAL-1/4.1B).
J.Biol.Chem., 286, 2011
2GQS
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BU of 2gqs by Molmil
SAICAR Synthetase Complexed with CAIR-Mg2+ and ADP
Descriptor: 5-AMINO-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID, ADENOSINE-5'-DIPHOSPHATE, FORMIC ACID, ...
Authors:Ginder, N.D, Honzatko, R.B.
Deposit date:2006-04-21
Release date:2006-05-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Nucleotide Complexes of Escherichia coli Phosphoribosylaminoimidazole Succinocarboxamide Synthetase.
J.Biol.Chem., 281, 2006
6XKY
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BU of 6xky by Molmil
Caulobacter crescentus FljK filament, straightened
Descriptor: Flagellin
Authors:Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R.
Deposit date:2020-06-27
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria
J.Bacteriol., 203, 2021
2GZE
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BU of 2gze by Molmil
Crystal structure of the E9 DNase domain with a mutant immunity protein IM9 (Y55A)
Descriptor: Colicin-E9, Colicin-E9 immunity protein, PHOSPHATE ION, ...
Authors:Santi, P.S, Kolade, O.O, Kuhlmann, U.C, Kleanthous, C, Hemmings, A.M.
Deposit date:2006-05-11
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Complex of the Colicin E9 DNase Domain with a Mutant Immunity Protein, IM9 (Y55A)
To be Published
2GTM
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BU of 2gtm by Molmil
Mutated Mouse P38 MAP Kinase Domain in complex with Inhibitor PG-892579
Descriptor: 8-(2-CHLOROPHENYLAMINO)-2-(2,6-DIFLUOROPHENYLAMINO)-9-ETHYL-9H-PURINE-1,7-DIIUM, Mitogen-activated protein kinase 14
Authors:Walter, R.L, Mekel, M.J, Evdokimov, A.G, Pokross, M.E, Sabat, M.
Deposit date:2006-04-28
Release date:2006-05-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The development of novel C-2, C-8, and N-9 trisubstituted purines as inhibitors of TNF-alpha production.
Bioorg.Med.Chem.Lett., 16, 2006
2GZM
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BU of 2gzm by Molmil
Crystal Structure of the Glutamate Racemase from Bacillus anthracis
Descriptor: D-GLUTAMIC ACID, Glutamate racemase
Authors:May, M, Santarsiero, B.D, Johnson, M.E, Mesecar, A.D.
Deposit date:2006-05-11
Release date:2007-05-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural and functional analysis of two glutamate racemase isozymes from Bacillus anthracis and implications for inhibitor design.
J.Mol.Biol., 371, 2007
2GVI
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BU of 2gvi by Molmil
Crystal structure of a putative formylmethanofuran dehydrogenase subunit e (ta1109) from thermoplasma acidophilum at 1.87 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, UNKNOWN LIGAND, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-05-02
Release date:2006-06-13
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger.
Acta Crystallogr.,Sect.F, 66, 2010
6CRX
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BU of 6crx by Molmil
SARS Spike Glycoprotein, Stabilized variant, two S1 CTDs in the upwards conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018

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