Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GJG
DownloadVisualize
BU of 4gjg by Molmil
Crystal structure of the amino-terminal domain of human cardiac troponin C mutant D2N/V28I/L29Q/G30D (NIQD) in complex with cadmium.
Descriptor: ACETATE ION, CADMIUM ION, CALCIUM ION, ...
Authors:Zhang, X, Paetzel, M.
Deposit date:2012-08-09
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of cardiac troponin C regulatory domain with bound Cd(2+) reveals a closed conformation and unique ion coordination.
Acta Crystallogr.,Sect.D, 69, 2013
4WLT
DownloadVisualize
BU of 4wlt by Molmil
High pressure protein crystallography of hen egg white lysozyme at 190 MPa
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Yamada, H, Nagae, T, Watanabe, N.
Deposit date:2014-10-08
Release date:2015-04-08
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-pressure protein crystallography of hen egg-white lysozyme
Acta Crystallogr.,Sect.D, 71, 2015
1F8T
DownloadVisualize
BU of 1f8t by Molmil
FAB (LNKB-2) OF MONOCLONAL ANTIBODY, CRYSTAL STRUCTURE
Descriptor: ANTIBODY FAB FRAGMENT (HEAVY CHAIN), ANTIBODY FAB FRAGMENT (LIGHT CHAIN)
Authors:Fokin, A.V, Afonin, P.V, Mikhailova, I.I, Tsygannik, I.N, Mareeva, T.I.
Deposit date:2000-07-05
Release date:2001-07-05
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Spatial structure of a Fab-fragment of a monoclonal antibody to human interleukin-2 in two crystalline forms at a resolution of 2.2 and 2.9 angstroms
Bioorg.Khim., 26, 2000
5XJS
DownloadVisualize
BU of 5xjs by Molmil
Crystal Structure of the Gemin2-binding domain of SMN, Gemin2dN39 in Complex with SmD1(1-82)/D2/F/E from Human
Descriptor: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ...
Authors:Yi, H, Zhang, R.
Deposit date:2017-05-04
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Negative cooperativity between Gemin2 and RNA provides insights into RNA selection and the SMN complex's release in snRNP assembly.
Nucleic Acids Res., 2019
6GJI
DownloadVisualize
BU of 6gji by Molmil
Cyclophilin A complexed with the tri-vector ligand 8.
Descriptor: GLYCEROL, Peptidyl-prolyl cis-trans isomerase A, ethyl 2-[[(4-aminophenyl)methyl-[(1-methyl-1,2,3-triazol-4-yl)methyl]carbamoyl]amino]ethanoate
Authors:Georgiou, C, De Simone, A, Walkinshaw, M.D, Michel, J.
Deposit date:2018-05-16
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors.
Chem Sci, 10, 2019
5A59
DownloadVisualize
BU of 5a59 by Molmil
The structure of GH101 E796Q mutant from Streptococcus pneumoniae TIGR4 in complex with T-antigen
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CITRIC ACID, ...
Authors:Gregg, K.J, Suits, M.D.L, Deng, L, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-06-16
Release date:2015-09-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Analysis of a Family 101 Glycoside Hydrolase in Complex with Carbohydrates Reveals Insights Into its Mechanism.
J.Biol.Chem., 290, 2015
5XGY
DownloadVisualize
BU of 5xgy by Molmil
Crystal structure of peptidoglycan recognition protein (PGRP-S) at 2.45 A resolution
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Peptidoglycan recognition protein 1
Authors:Shokeen, A, Sharma, P, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-04-18
Release date:2017-05-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of peptidoglycan recognition protein (PGRP-S) at 2.45 A resolution
To Be Published
5A2J
DownloadVisualize
BU of 5a2j by Molmil
Crystal structure of scFv-SM3 in complex with the naked peptide APDTRP
Descriptor: 1,2-ETHANEDIOL, SCFV-SM3, THE NAKED PEPTIDE APDTRP
Authors:Martinez-Saez, N, Castro-Lopez, J, Valero-Gonzalez, J, Madariaga, D, Companon, I, Somovilla, V.J, Salvado, M, Asensio, J.L, Jimenez-Barbero, J, Avenoza, A, Busto, J.H, Bernardes, G.J.L, Peregrina, J.M, Hurtado-Guerrero, R, Corzana, F.
Deposit date:2015-05-20
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Deciphering the Non-Equivalence of Serine and Threonine O-Glycosylation Points: Implications for Molecular Recognition of the Tn Antigen by an Anti-Muc1 Antibody.
Angew.Chem.Int.Ed.Engl., 54, 2015
4WLW
DownloadVisualize
BU of 4wlw by Molmil
CRYSTAL STRUCTURE OF THE AG(I) (ACTIVATOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA
Descriptor: DNA NON-TEMPLATE STRAND (5-D(*DGP*DAP*DCP*DCP *DTP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DGP*DCP*DTP*DGP*DGP*DAP *DAP*DGP*DGP*DTP*DC)-3, DNA TEMPLATE STRAND (5-D(*DGP*DAP*DCP*DCP*DTP *DTP*DCP*DCP*DAP*DGP*DCP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DAP *DGP*DGP*DTP*DC)-3, HTH-type transcriptional regulator CueR, ...
Authors:Philips, S.J, Canalizo-Hernandez, M, Mondragon, A, O'Halloran, T.V.
Deposit date:2014-10-08
Release date:2015-09-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:TRANSCRIPTION. Allosteric transcriptional regulation via changes in the overall topology of the core promoter.
Science, 349, 2015
5A38
DownloadVisualize
BU of 5a38 by Molmil
Mutations in the Calponin homology domain of Alpha-Actinin-2 affect Actin binding and incorporation in muscle.
Descriptor: ALPHA-ACTININ-2
Authors:Haywood, N.J, Wolny, M, Trinh, C.H, Shuping, Y, Edwards, T.A, Peckham, M.
Deposit date:2015-05-27
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hypertrophic Cardiomyopathy Mutations in the Calponin-Homology Domain of Actn2 Affect Actin Binding and Cardiomyocyte Z-Disc Incorporation.
Biochem.J., 473, 2016
4GKA
DownloadVisualize
BU of 4gka by Molmil
Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with phosphate
Descriptor: GLYCEROL, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Haapalainen, A.M, Ho, M.C, Suarez, J.J, Almo, S.C, Schramm, V.L.
Deposit date:2012-08-10
Release date:2013-02-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Catalytic Site Conformations in Human PNP by (19)F-NMR and Crystallography.
Chem.Biol., 20, 2013
8D8W
DownloadVisualize
BU of 8d8w by Molmil
Crystal structure of ChoE with Ser38 adopting alternative conformations
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ChoE, IODIDE ION
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
4WJ5
DownloadVisualize
BU of 4wj5 by Molmil
Structure of HLA-A2 in complex with an altered peptide ligands based on Mart-1 variant epitope
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Celie, P.H.N, Rodenko, B, Ovaa, H.
Deposit date:2014-09-29
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Altered Peptide Ligands Revisited: Vaccine Design through Chemically Modified HLA-A2-Restricted T Cell Epitopes.
J Immunol., 193, 2014
4GL0
DownloadVisualize
BU of 4gl0 by Molmil
Putative spermidine/putrescine ABC transporter from Listeria monocytogenes
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Lmo0810 protein, ...
Authors:Osipiuk, J, Zhou, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-13
Release date:2012-08-22
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Putative spermidine/putrescine ABC transporter from Listeria monocytogenes
To be Published
5A4W
DownloadVisualize
BU of 5a4w by Molmil
AtGSTF2 from Arabidopsis thaliana in complex with quercetrin
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside, ACETATE ION, GLUTATHIONE S-TRANSFERASE F2
Authors:Ahmad, L, Rylott, E, Bruce, N.C, Edwards, R, Grogan, G.
Deposit date:2015-06-15
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural evidence for Arabidopsis glutathione transferase AtGSTF2 functioning as a transporter of small organic ligands.
FEBS Open Bio, 7, 2017
4WFG
DownloadVisualize
BU of 4wfg by Molmil
Human TRAAK K+ channel in a Tl+ bound conductive conformation
Descriptor: ANTI-TRAAK ANTIBODY 13E9 FAB FRAGMENT HEAVY CHAIN, ANTI-TRAAK ANTIBODY 13E9 FAB FRAGMENT LIGHT CHAIN, CALCIUM ION, ...
Authors:Brohawn, S.G, MacKinnon, R.
Deposit date:2014-09-15
Release date:2014-12-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Physical mechanism for gating and mechanosensitivity of the human TRAAK K+ channel.
Nature, 516, 2014
5XKQ
DownloadVisualize
BU of 5xkq by Molmil
Crystal structure of Msmeg3575 in complex with ammeline
Descriptor: 4,6-diamino-1,3,5-triazin-2-ol, ACETATE ION, CMP/dCMP deaminase, ...
Authors:Gaded, V.M, Anand, R.
Deposit date:2017-05-09
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Selective Deamination of Mutagens by a Mycobacterial Enzyme
J. Am. Chem. Soc., 139, 2017
8D8Y
DownloadVisualize
BU of 8d8y by Molmil
Crystal structure of ChoE N147A mutant in complex with acetylthiocholine
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ACETYLTHIOCHOLINE, CHLORIDE ION, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
6GMZ
DownloadVisualize
BU of 6gmz by Molmil
Staphylopine dehydrogenase in complex with Histidine tag and citrate
Descriptor: ALA-HIS-HIS-ALA, AMMONIUM ION, CITRIC ACID, ...
Authors:Hajjar, C, Arnoux, P.
Deposit date:2018-05-29
Release date:2019-04-10
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Control by Metals of Staphylopine Dehydrogenase Activity during Metallophore Biosynthesis.
J.Am.Chem.Soc., 141, 2019
5A5N
DownloadVisualize
BU of 5a5n by Molmil
Crystal structure of human ATAD2 bromodomain in complex with (2S)-2,6- diacetamido-N-methylhexanamide
Descriptor: (2S)-2,6-diacetamido-N-methyl-hexanamide, 1,2-ETHANEDIOL, ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 2, ...
Authors:Chung, C, Bamborough, P, Demont, E.
Deposit date:2015-06-20
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment-Based Discovery of Low-Micromolar Atad2 Bromodomain Inhibitors.
J.Med.Chem., 58, 2015
5XHN
DownloadVisualize
BU of 5xhn by Molmil
Crystal structure of Frog M-ferritin K104E mutant
Descriptor: CHLORIDE ION, Ferritin, middle subunit, ...
Authors:Jagdev, M.K, Vasudevan, D.
Deposit date:2017-04-21
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Surface charge dependent separation of modified and hybrid ferritin in native PAGE: Impact of lysine 104
Biochim. Biophys. Acta, 1865, 2017
4GLW
DownloadVisualize
BU of 4glw by Molmil
DNA ligase A in complex with inhibitor
Descriptor: 7-methoxy-6-methylpteridine-2,4-diamine, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
Authors:Prade, L, Lange, R, Tidten-Luksch, N, Chambovey, A.
Deposit date:2012-08-15
Release date:2012-10-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided design, synthesis and biological evaluation of novel DNA ligase inhibitors with in vitro and in vivo anti-staphylococcal activity.
Bioorg.Med.Chem.Lett., 22, 2012
5AG5
DownloadVisualize
BU of 5ag5 by Molmil
CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A THIAZOLIDINONE LIGAND
Descriptor: (2R)-3-benzyl-2-(1H-indazol-5-yl)-1,3-thiazolidin-4-one, GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, TETRADECANOYL-COA
Authors:Robinson, D.A, Spinks, D, Smith, V.C, Thompson, S, Smith, A, Torrie, L.S, McElroy, S.P, Brand, S, Brenk, R, Frearson, J.A, Read, K.D, Wyatt, P.G, Gilbert, I.H.
Deposit date:2015-01-29
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of Small-Molecule Trypanosoma Brucei N-Myristoyltransferase Inhibitors: Discovery and Optimisation of a Novel Binding Mode.
Chemmedchem, 10, 2015
8D9Z
DownloadVisualize
BU of 8d9z by Molmil
Crystal structure of Cobra alpha-neurotoxin in complex with Centi-LNX-D09 antibody
Descriptor: ACETATE ION, Centi-LNX-D09 Fab heavy chain, Centi-LNX-D09 Fab light chain, ...
Authors:Pletnev, S, Verardi, R, Tully, E.S, Glanville, J, Kwong, P.D.
Deposit date:2022-06-12
Release date:2023-06-14
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Venom protection by antibody from a snakebite hyperimmune subject
To Be Published
5AED
DownloadVisualize
BU of 5aed by Molmil
A bacterial protein structure in glycoside hydrolase family 31
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ALPHA-GLUCOSIDASE YIHQ, CALCIUM ION
Authors:Jin, Y, Speciale, G, Davies, G.J, Williams, S.J, Goddard-Borger, E.D.
Deposit date:2015-08-28
Release date:2016-02-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Yihq is a Sulfoquinovosidase that Cleaves Sulfoquinovosyl Diacylglyceride Sulfolipids.
Nat.Chem.Biol., 12, 2016

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon