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5OSG
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BU of 5osg by Molmil
Structure of KSRP in context of Leishmania donovani 80S
Descriptor: 18S rRNA, 40S ribosomal protein S6, RNA binding protein, ...
Authors:Brito Querido, J, Mancera-Martinez, E, Vicens, Q, Bochler, A, Chicher, J, Simonetti, A, Hashem, Y.
Deposit date:2017-08-17
Release date:2017-11-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The cryo-EM Structure of a Novel 40S Kinetoplastid-Specific Ribosomal Protein.
Structure, 25, 2017
1MRG
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BU of 1mrg by Molmil
STUDIES ON CRYSTAL STRUCTURES ACTIVE CENTER GEOMETRY AND DEPURINE MECHANISM OF TWO RIBOSOME-INACTIVATING PROTEINS
Descriptor: ADENOSINE, ALPHA-MOMORCHARIN
Authors:Huang, Q, Liu, S, Tang, Y, Jin, S, Wang, Y.
Deposit date:1994-07-01
Release date:1995-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Studies on crystal structures, active-centre geometry and depurinating mechanism of two ribosome-inactivating proteins.
Biochem.J., 309, 1995
4GFQ
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BU of 4gfq by Molmil
2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-03
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis
TO BE PUBLISHED
8XXN
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BU of 8xxn by Molmil
Cryo-EM structure of the human 43S ribosome with PDCD4
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 34, 2024
8XXL
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BU of 8xxl by Molmil
Cryo-EM structure of the human 40S ribosome with PDCD4
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 34, 2024
8XXM
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BU of 8xxm by Molmil
Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3G
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 34, 2024
7B7D
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BU of 7b7d by Molmil
Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Ranjan, N, Pochopien, A.A, Wu, C.C, Beckert, B, Blanchet, S, Green, R, Rodnina, M.V, Wilson, D.N.
Deposit date:2020-12-10
Release date:2021-03-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:eEF3 promotes late stages of tRNA translocation including E-tRNA release from the ribosome
To Be Published
7AZY
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BU of 7azy by Molmil
Context-specific inhibition of eukaryotic translation by macrolide antibiotics
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Koller, T.O, Wilson, D.N.
Deposit date:2020-11-17
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.877 Å)
Cite:Context-specific action of macrolide antibiotics on the eukaryotic ribosome.
Nat Commun, 12, 2021
5A7U
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BU of 5a7u by Molmil
Single-particle cryo-EM of co-translational folded adr1 domain inside the E. coli ribosome exit tunnel.
Descriptor: REGULATORY PROTEIN ADR1, ZINC ION
Authors:Nilsson, O.B, Hedman, R, Marino, J, Wickles, S, Bischoff, L, Johansson, M, Muller-Lucks, A, Trovato, F, Puglisi, J.D, O'Brien, E, Beckmann, R, von Heijne, G.
Deposit date:2015-07-10
Release date:2015-09-16
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cotranslational Protein Folding Inside the Ribosome Exit Tunnel.
Cell Rep., 12, 2015
6CAQ
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BU of 6caq by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:DeMirci, H.
Deposit date:2018-01-31
Release date:2018-07-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
To Be Published
7ODT
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BU of 7odt by Molmil
State C of the human mitoribosomal large subunit assembly intermediate
Descriptor: 16S mitochondrial rRNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N.
Deposit date:2021-04-30
Release date:2021-06-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
Nat Commun, 12, 2021
3MRY
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BU of 3mry by Molmil
Crystal Structure of type I ribosome inactivating protein from Momordica balsamina with 6-aminopurine at 2.0A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, GLYCEROL, ...
Authors:Kushwaha, G.S, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-04-29
Release date:2010-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of type I ribosome inactivating protein from Momordica balsamina with 6-aminopurine at 2.0A resolution
To be Published
9FPZ
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BU of 9fpz by Molmil
Human NatA-MAP2 80S ribosome complex
Descriptor: 28S rRNA (300-MER, fragments), 5.8S rRNA (58-MER), ...
Authors:Klein, M.A, Wild, K, Sinning, I.
Deposit date:2024-06-14
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Multi-protein assemblies orchestrate enzymatic processing of the nascent chain on the 80S ribosome
To Be Published
7ODS
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BU of 7ods by Molmil
State B of the human mitoribosomal large subunit assembly intermediate
Descriptor: 16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA, 39S ribosomal protein L10, ...
Authors:Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N.
Deposit date:2021-04-30
Release date:2021-06-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
Nat Commun, 12, 2021
7ODR
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BU of 7odr by Molmil
State A of the human mitoribosomal large subunit assembly intermediate
Descriptor: 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA, 39S ribosomal protein L10, ...
Authors:Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N.
Deposit date:2021-04-30
Release date:2021-06-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
Nat Commun, 12, 2021
5ILX
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BU of 5ilx by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina with Uracil at 1.70 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome inactivating protein, ...
Authors:Singh, P.K, Singh, A, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-03-05
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina with Uracil at 1.70 Angstrom resolution
To Be Published
9FQ0
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BU of 9fq0 by Molmil
Human NatA-NAC-MAP1 80S ribosome complex
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L19, ...
Authors:Klein, M.A, Wild, K, Sinning, I.
Deposit date:2024-06-14
Release date:2024-07-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.67 Å)
Cite:Multi-protein assemblies orchestrate enzymatic processing of the nascent chain on the 80S ribosome
To Be Published
7AOR
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BU of 7aor by Molmil
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
Descriptor: 30S Ribosomal protein S17-like protein, AKAP7_NLS domain-containing protein, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
Deposit date:2020-10-15
Release date:2021-04-28
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VUD
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BU of 6vud by Molmil
Crystal structure of a ribosome recycling factor from Ehrlichia chaffeensis
Descriptor: CHLORIDE ION, Ribosome-recycling factor
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-02-15
Release date:2020-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a ribosome recycling factor from Ehrlichia chaffeensis
to be published
3DG2
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BU of 3dg2 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex
Descriptor: 16S Ribosomal RNA from E. coli, 23S Ribosomal RNA from E. coli
Authors:Gao, H, LeBarron, J, Frank, J.
Deposit date:2008-06-12
Release date:2009-02-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
3DG4
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BU of 3dg4 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex
Descriptor: 16S Ribosomal RNA from E. coli, 23S RibosomaL RNA from E. coli
Authors:Gao, H, LeBarron, J, Frank, J.
Deposit date:2008-06-12
Release date:2009-02-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (12.8 Å)
Cite:Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
6W7N
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BU of 6w7n by Molmil
30S-Inactive-low-Mg2+ Class A
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S12, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-19
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W6K
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BU of 6w6k by Molmil
30S-Activated-high-Mg2+
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-17
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W77
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BU of 6w77 by Molmil
30S-Inactivated-high-Mg2+ Class A
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-18
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W7W
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BU of 6w7w by Molmil
30S-Inactive-low-Mg2+ Class B
Descriptor: 16S rRNA, 30S ribosomal protein S12, 30S ribosomal protein S15, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-19
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020

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