PDB: 73501 resultsInfo pagesStatus searchChemie searchBIRD

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3IMQ	Crystal structure of the NusB101-S10(delta loop) complex Descriptor: 30S ribosomal protein S10, N utilization substance protein B, POTASSIUM ION Authors: Luo, X, Wahl, M.C. Deposit date: 2009-08-11 Release date: 2009-11-10 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Fine tuning of the E. coli NusB:NusE complex affinity to BoxA RNA is required for processive antitermination. Nucleic Acids Res., 38, 2010
3W2V	Crystal structure of the Cmr2dHD-Cmr3 subcomplex bound to 3'-AMP Descriptor: CRISPR system Cmr subunit Cmr2, CRISPR system Cmr subunit Cmr3, ZINC ION, ... Authors: Numata, T, Osawa, T. Deposit date: 2012-12-06 Release date: 2013-10-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal Structure of the Cmr2-Cmr3 Subcomplex in the CRISPR-Cas RNA Silencing Effector Complex. J.Mol.Biol., 425, 2013
2EJT	Complex structure of Trm1 from Pyrococcus horikoshii with S-adenosyl-L-Methionine Descriptor: GLYCEROL, N(2),N(2)-dimethylguanosine tRNA methyltransferase, S-ADENOSYLMETHIONINE Authors: Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-03-20 Release date: 2007-09-25 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii J.Mol.Biol., 383, 2008
6YZ1	The crystal structure of SARS-CoV-2 nsp10-nsp16 methyltransferase complex with Sinefungin Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SINEFUNGIN, ZINC ION, ... Authors: Krafcikova, P, Silhan, J, Nencka, R, Boura, E. Deposit date: 2020-05-06 Release date: 2020-05-13 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural analysis of the SARS-CoV-2 methyltransferase complex involved in RNA cap creation bound to sinefungin. Nat Commun, 11, 2020
4IUQ	crystal structure of SHH1 SAWADEE domain Descriptor: CYMAL-4, SAWADEE HOMEODOMAIN HOMOLOG 1, ZINC ION Authors: Du, J, Patel, D.J. Deposit date: 2013-01-21 Release date: 2013-05-01 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.809 Å) Cite: Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature, 498, 2013
1LMV	Solution structure of the unmodified U2 snRNA-intron branch site helix from S. cerevisiae Descriptor: 5'-R(*GP*GP*UP*GP*UP*AP*GP*UP*A)-3', 5'-R(*UP*AP*CP*UP*AP*AP*CP*AP*CP*C)-3' Authors: Newby, M.I, Greenbaum, N.L. Deposit date: 2002-05-02 Release date: 2002-11-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sculpting of the Spliceosomal Branch Site Recognition Motif by a Conserved Pseudouridine Nat.Struct.Biol., 9, 2002
1LPW	Solution structure of the yeast spliceosomal U2 snRNA-intron branch site helix featuring a conserved pseudouridine Descriptor: 5'-R(*GP*GP*UP*GP*(PSU)P*AP*GP*UP*A)-3', 5'-R(*UP*AP*CP*UP*AP*AP*CP*AP*CP*C)-3' Authors: Newby, M.I, Greenbaum, N.L. Deposit date: 2002-05-08 Release date: 2002-11-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sculpting of the Spliceosomal Branch Site Recognition Motif by a Conserved Pseudouridine Nat.Struct.Biol., 12, 2002
2EGW	Crystal structure of rRNA methyltransferase with SAH ligand Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, UPF0088 protein aq_165 Authors: Dong, X, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-03-02 Release date: 2007-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structure of rRNA methyltransferase with SAH ligand To be Published
2EJU	Complex structure of Trm1 from Pyrococcus horikoshii with S-adenosyl-L-Homocystein Descriptor: GLYCEROL, N(2),N(2)-dimethylguanosine tRNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE Authors: Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-03-20 Release date: 2007-09-25 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii J.Mol.Biol., 383, 2008
2OY0	Crystal structure of the West Nile virus methyltransferase Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE Authors: Li, H.M, Zhao, Y.W, Guo, Y, Shi, P.Y. Deposit date: 2007-02-21 Release date: 2007-04-03 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure and Function of Flavivirus NS5 Methyltransferase. J.Virol., 81, 2007
4CIO	RRM domain from C. elegans SUP-12 bound to GGUGUGC RNA Descriptor: 5'-R(*GP*GP*UP*GP*UP*GP*CP)-3', PROTEIN SUP-12, ISOFORM A Authors: Amrane, S, Mackereth, C.D. Deposit date: 2013-12-12 Release date: 2014-09-03 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Backbone-Independent Nucleic Acid Binding by Splicing Factor Sup-12 Reveals Key Aspects of Molecular Recognition Nat.Commun., 5, 2014
7MRJ	Crystal structure of a novel ubiquitin-like TINCR Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ... Authors: Forouhar, F, Morgado-Palacin, L, Brown, J.A, Martinez, T, Pedrero, J.M.G, Reglero, C, Chaudhry, I, Vaughan, J, Rodriguez-Perales, S, Allonca, E, Granda-Diaz, R, Quinn, S.A, Fernandez, A.F, Fraga, M.F, Kim, A.L, Santos-Juanes, J, Owens, D.M, Rodrigo, J.P, Saghatelian, A, Ferrando, A.A. Deposit date: 2021-05-07 Release date: 2022-03-16 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.12 Å) Cite: The TINCR ubiquitin-like microprotein is a tumor suppressor in squamous cell carcinoma. Nat Commun, 14, 2023
2Q4G	Ensemble refinement of the protein crystal structure of human ribonuclease inhibitor complexed with ribonuclease I Descriptor: CITRIC ACID, Ribonuclease inhibitor, Ribonuclease pancreatic Authors: Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG) Deposit date: 2007-05-31 Release date: 2007-06-19 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.954 Å) Cite: Inhibition of human pancreatic ribonuclease by the human ribonuclease inhibitor protein. J.Mol.Biol., 368, 2007
4RX1	Crystal Structure of antibiotic-resistance methyltransferase Kmr Descriptor: GLYCEROL, IODIDE ION, Putative rRNA methyltransferase Authors: Savic, M. Deposit date: 2014-12-08 Release date: 2015-03-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.472 Å) Cite: 30S Subunit-Dependent Activation of the Sorangium cellulosum So ce56 Aminoglycoside Resistance-Conferring 16S rRNA Methyltransferase Kmr. Antimicrob.Agents Chemother., 59, 2015
3HXG	Crystal structure of Schistsome eIF4E complexed with m7GpppA and 4E-BP Descriptor: Eukaryotic Translation Initiation Factor 4E, Eukaryotic translation initiation factor 4E-binding protein 1, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE Authors: Liu, W, Zhao, R, Jones, D.N.M, Davis, R.E. Deposit date: 2009-06-20 Release date: 2009-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap. J.Biol.Chem., 284, 2009
2XO6	DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE Descriptor: 5'-D(*TP*TP*GP*AP*TP*G)-3', ACETATE ION, CADMIUM ION, ... Authors: Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F. Deposit date: 2010-08-09 Release date: 2010-10-13 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans. Embo J., 29, 2010
3GVO	Structure and RNA binding of the mouse Pumilio-2 Puf Domain Descriptor: DITHIANE DIOL, GLYCEROL, Pumilio homolog 2 Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2009-03-31 Release date: 2009-06-30 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure and RNA binding of the mouse Pumilio-2 Puf domain J.Struct.Biol., 167, 2009
7JLY	Crystal Structure of RNA Binding Protein PG1 Descriptor: ACETATE ION, CALCIUM ION, RNA-binding protein Authors: Musayev, F.N, Scarsdale, J.N, Belvin, B.R, Lewis, J.P. Deposit date: 2020-07-30 Release date: 2021-07-28 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.73 Å) Cite: High Resolution Structure of RNA Binding Protein PG1 To be published
3GVT	Structure and RNA binding of the mouse Pumilio-2 Puf Domain Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Pumilio homolog 2 Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2009-03-31 Release date: 2009-06-30 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure and RNA binding of the mouse Pumilio-2 Puf domain J.Struct.Biol., 167, 2009
4IUP	crystal structure of Se-substituted arabidopsis thaliana SHH1 SAWADEE domain L200M/L218M mutant Descriptor: BETA-MERCAPTOETHANOL, CYMAL-4, SAWADEE HOMEODOMAIN HOMOLOG 1, ... Authors: Du, J, Patel, D.J. Deposit date: 2013-01-21 Release date: 2013-05-01 Last modified: 2013-07-10 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature, 498, 2013
2L3E	Solution structure of P2a-J2a/b-P2b of human telomerase RNA Descriptor: 35-MER Authors: Zhang, Q, Kim, N, Peterson, R.D, Wang, Z, Feigon, J. Deposit date: 2010-09-13 Release date: 2010-11-17 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Inaugural Article: Structurally conserved five nucleotide bulge determines the overall topology of the core domain of human telomerase RNA. Proc.Natl.Acad.Sci.USA, 107, 2010
1RGA	CRYSTAL STRUCTURE OF RNASE T1 WITH 3'-GMP AND GUANOSINE: A PRODUCT COMPLEX Descriptor: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ... Authors: Zegers, I, Wyns, L. Deposit date: 1993-06-07 Release date: 1993-10-31 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of RNase T1 with 3'-guanylic acid and guanosine. J.Biol.Chem., 269, 1994
2DI2	NMR structure of the HIV-2 nucleocapsid protein Descriptor: Nucleocapsid protein p7, ZINC ION Authors: Matsui, T, Kodera, Y, Endoh, H, Miyauchi, E, Komatsu, H, Sato, K, Tanaka, T, Kohno, T, Maeda, T. Deposit date: 2006-03-27 Release date: 2007-03-13 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: RNA Recognition Mechanism of the Minimal Active Domain of the Human Immunodeficiency Virus Type-2 Nucleocapsid Protein J.Biochem.(Tokyo), 141, 2007
2KBE	solution structure of amino-terminal domain of Dbp5p Descriptor: ATP-dependent RNA helicase DBP5 Authors: Fan, J.S, Zhang, J, Yang, D. Deposit date: 2008-11-27 Release date: 2009-10-13 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides. J.Mol.Biol., 388, 2009
2J04	The tau60-tau91 subcomplex of yeast transcription factor IIIC Descriptor: HYPOTHETICAL PROTEIN YPL007C, YDR362CP Authors: Mylona, A, Fernandez-Tornero, C, Legrand, P, Muller, C.W. Deposit date: 2006-07-31 Release date: 2006-10-23 Last modified: 2019-04-03 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structure of the Tau60/Deltatau91 Subcomplex of Yeast Transcription Factor Iiic: Insights Into Preinitiation Complex Assembly Mol.Cell, 24, 2006

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