Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NAW
DownloadVisualize
BU of 1naw by Molmil
ENOLPYRUVYL TRANSFERASE
Descriptor: CYCLOHEXYLAMMONIUM ION, UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYL-TRANSFERASE
Authors:Schoenbrunn, E, Sack, S, Eschenburg, S, Perrakis, A, Krekel, F, Amrhein, N, Mandelkow, E.
Deposit date:1996-07-23
Release date:1997-07-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of UDP-N-acetylglucosamine enolpyruvyltransferase, the target of the antibiotic fosfomycin.
Structure, 4, 1996
1NB9
DownloadVisualize
BU of 1nb9 by Molmil
Crystal Structure of Riboflavin Kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RIBOFLAVIN, ...
Authors:Karthikeyan, S, Zhou, Q, Mseeh, F, Grishin, N.V, Osterman, A.L, Zhang, H.
Deposit date:2002-12-02
Release date:2003-03-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Human Riboflavin Kinase Reveals a Beta Barrel Fold and a Novel Active Site Arch
Structure, 11, 2003
5NSM
DownloadVisualize
BU of 5nsm by Molmil
unliganded Structure of Leucyl aminopeptidase from Trypanosoma brucei
Descriptor: Aminopeptidase, putative, BICARBONATE ION, ...
Authors:Timm, J, Wilson, K.
Deposit date:2017-04-26
Release date:2017-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Characterization of Acidic M17 Leucine Aminopeptidases from the TriTryps and Evaluation of Their Role in Nutrient Starvation inTrypanosoma brucei.
mSphere, 2, 2018
5NXN
DownloadVisualize
BU of 5nxn by Molmil
Structure of a L5-deletion mutant of Providencia stuartii Omp-Pst1
Descriptor: CALCIUM ION, Porin 1
Authors:El Khatib, M, Colletier, J.P.
Deposit date:2017-05-10
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Porin self-association enables cell-to-cell contact in
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8IC1
DownloadVisualize
BU of 8ic1 by Molmil
endo-alpha-D-arabinanase EndoMA1 D51N mutant from Microbacterium arabinogalactanolyticum in complex with arabinooligosaccharides
Descriptor: (3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Li, J, Nakashima, C, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-10
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
8I16
DownloadVisualize
BU of 8i16 by Molmil
Crystal structure of the selenomethionine (SeMet)-derived Cas12g (D513A) mutant
Descriptor: Cas12g, ZINC ION
Authors:Zhang, B, Chen, J, Ye, Y.M, OuYang, S.Y.
Deposit date:2023-01-12
Release date:2023-08-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural transitions upon guide RNA binding and their importance in Cas12g-mediated RNA cleavage.
Plos Genet., 19, 2023
8IC6
DownloadVisualize
BU of 8ic6 by Molmil
exo-beta-D-arabinanase ExoMA2 from Microbacterium arabinogalactanolyticum in complex with Tris
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Fukushima, R, Kashima, T, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-10
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
7WCE
DownloadVisualize
BU of 7wce by Molmil
Crystal structure of HIV-1 integrase catalytic core domain in complex with (2S)-2-(tert-Butoxy)-2-(10-fluoro-2-(2-hydroxy-4-methylphenyl)-1,4-dimethyl-5-(methylsulfonyl)-5,6-dihydrophenanthridin-3-yl)acetic acid
Descriptor: (2S)-2-[10-fluoranyl-1,4-dimethyl-2-(4-methyl-2-oxidanyl-phenyl)-5-methylsulfonyl-6H-phenanthridin-3-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, GLYCEROL, Integrase catalytic, ...
Authors:Taoda, Y, Sekiguchi, Y.
Deposit date:2021-12-20
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of tricyclic HIV-1 integrase-LEDGF/p75 allosteric inhibitors by intramolecular direct arylation reaction.
Bioorg.Med.Chem.Lett., 64, 2022
8IC7
DownloadVisualize
BU of 8ic7 by Molmil
exo-beta-D-arabinofuranosidase ExoMA2 from Microbacterium arabinogalactanolyticum in complex with beta-D-arabinofuranose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Fukushima, R, Kashima, T, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-11
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
1N9E
DownloadVisualize
BU of 1n9e by Molmil
Crystal structure of Pichia pastoris Lysyl Oxidase PPLO
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Guss, J.M, Duff, A.P.
Deposit date:2002-11-24
Release date:2004-01-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Pichia pastoris Lysyl Oxidase
Biochemistry, 42, 2003
5O5W
DownloadVisualize
BU of 5o5w by Molmil
Molybdenum storage protein room-temperature structure determined by serial millisecond crystallography
Descriptor: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Steffen, B, Weinert, T, Ermler, U, Standfuss, J.
Deposit date:2017-06-02
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons.
Nat Commun, 8, 2017
4DH7
DownloadVisualize
BU of 4dh7 by Molmil
Low temperature X-ray structure of cAMP dependent Protein Kinase A catalytic subunit with high Mg2+, AMP-PNP and IP20'
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Kovalevsky, A.Y, Langan, P.
Deposit date:2012-01-27
Release date:2012-06-27
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Low- and room-temperature X-ray structures of protein kinase A ternary complexes shed new light on its activity.
Acta Crystallogr.,Sect.D, 68, 2012
1NDE
DownloadVisualize
BU of 1nde by Molmil
Estrogen Receptor beta with Selective Triazine Modulator
Descriptor: 4-(2-{[4-{[3-(4-CHLOROPHENYL)PROPYL]SULFANYL}-6-(1-PIPERAZINYL)-1,3,5-TRIAZIN-2-YL]AMINO}ETHYL)PHENOL, Estrogen receptor beta
Authors:Henke, B.R, Consler, T.G, Go, N, Hale, R.L, Hohman, D.R, Jones, S.A, Lu, A.T, Moore, L.B, Moore, J.T, Orband-Miller, L.A, Robinett, R.G, Shearin, J, Spearing, P.K, Stewart, E.L, Turnbull, P.S, Weaver, S.L, Williams, S.P, Wisely, G.B, Lambert, M.H.
Deposit date:2002-12-09
Release date:2002-12-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:A New Series of Estrogen Receptor Modulators That Display Selectivity for Estrogen Receptor beta
J.Med.Chem., 45, 2002
5WN5
DownloadVisualize
BU of 5wn5 by Molmil
APE1 exonuclease substrate complex with a C/T mismatch and Mn2+
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DV3))-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Freudenthal, B.D, Whitaker, A.M.
Deposit date:2017-07-31
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular snapshots of APE1 proofreading mismatches and removing DNA damage.
Nat Commun, 9, 2018
8I0E
DownloadVisualize
BU of 8i0e by Molmil
Sb3GT1 complex with UDP
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Wang, H.T, Wang, Z.L, Ye, M.
Deposit date:2023-01-10
Release date:2023-09-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the missing apiosylation step in flavonoid apiosides biosynthesis of Leguminosae plants.
Nat Commun, 14, 2023
1NH8
DownloadVisualize
BU of 1nh8 by Molmil
ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE) FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH AMP AND HISTIDINE
Descriptor: ADENOSINE MONOPHOSPHATE, ATP Phosphoribosyltransferase, HISTIDINE, ...
Authors:Cho, Y, Sharma, V, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2002-12-18
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ATP phosphoribosyltransferase from Mycobacterium tuberculosis
J.Biol.Chem., 278, 2003
8HTB
DownloadVisualize
BU of 8htb by Molmil
Staphylococcus aureus FtsZ 12-316 complexed with TXH9179
Descriptor: 3-[(6-ethynyl-[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
Authors:Bryan, E, Ferrer-Gonzalez, E, Sagong, H.Y, Fujita, J, Mark, L, Kaul, M, LaVoie, E.J, Matsumura, H, Pilch, D.S.
Deposit date:2022-12-21
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural and Antibacterial Characterization of a New Benzamide FtsZ Inhibitor with Superior Bactericidal Activity and In Vivo Efficacy Against Multidrug-Resistant Staphylococcus aureus.
Acs Chem.Biol., 18, 2023
1NI9
DownloadVisualize
BU of 1ni9 by Molmil
2.0 A structure of glycerol metabolism protein from E. coli
Descriptor: Protein glpX, SULFATE ION
Authors:Sanishvili, R, Brunzelle, J, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-12-23
Release date:2003-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Characterization of the Type II Fructose-1,6-bisphosphatase GlpX from Escherichia coli.
J.Biol.Chem., 284, 2009
7WHU
DownloadVisualize
BU of 7whu by Molmil
Human Neutrophil Elastase in-complex with Ecotin Peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ecotin Peptide, ...
Authors:Shankar, S, Jayaraman, S.
Deposit date:2021-12-31
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Sequence preference and scaffolding requirement for the inhibition of human neutrophil elastase by ecotin peptide
Protein Sci., 31, 2022
1NIG
DownloadVisualize
BU of 1nig by Molmil
2.0 A Structure of Protein of Unknown Function from Thermoplasma acidophilum
Descriptor: hypothetical protein TA1238
Authors:Sanishvili, R, Edwards, A, Christendat, D, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-12-23
Release date:2003-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the hypothetical protein TA1238 from Thermoplasma acidophilum: a new type of helical super-bundle.
J.STRUCT.FUNCT.GENOM., 5, 2004
8I7P
DownloadVisualize
BU of 8i7p by Molmil
Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-tyrosine
Descriptor: 6-(2-ethyl-4-hydroxyphenyl)-1H-indazole-3-carboxamide, Ricin A chain, SULFATE ION
Authors:Goto, M, Sakamoto, N, Higashi, S, Kawata, R, Nagatsu, K, Saito, R.
Deposit date:2023-02-01
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of ricin toxin A chain complexed with a highly potent pterin-based small-molecular inhibitor.
J Enzyme Inhib Med Chem, 38, 2023
8I0D
DownloadVisualize
BU of 8i0d by Molmil
Sb3GT1 375S/Q377H mutant complex with UDP-Glc
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Wang, H.T, Wang, Z.L, Ye, M.
Deposit date:2023-01-10
Release date:2023-09-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Insights into the missing apiosylation step in flavonoid apiosides biosynthesis of Leguminosae plants.
Nat Commun, 14, 2023
5NXR
DownloadVisualize
BU of 5nxr by Molmil
Trimeric structure of Omp-Pst1, the major porin from Providencia stuartii
Descriptor: CALCIUM ION, CHLORIDE ION, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Colletier, J.P, Nasrallah, C.
Deposit date:2017-05-10
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Porin self-association enables cell-to-cell contact in
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8IBO
DownloadVisualize
BU of 8ibo by Molmil
Crystal structure of Wild-Type Mycobacterium tuberculosis ClpC1 N-terminal domain in complex with Lassomycin
Descriptor: ACETATE ION, Lassomycin, Negative regulator of genetic competence ClpC/mecB
Authors:Jagdev, M.K, Vasudevan, D.
Deposit date:2023-02-10
Release date:2023-09-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of the N-terminal domain of MtClpC1 in complex with the anti-mycobacterial natural peptide Lassomycin.
Int.J.Biol.Macromol., 253, 2023
8IH4
DownloadVisualize
BU of 8ih4 by Molmil
Crystal Structure of Intracellular B30.2 Domain of BTN2A2 Mutant
Descriptor: Butyrophilin subfamily 2 member A2
Authors:Yang, Y.Y, Yi, S.M, Zhang, M.T, Chen, C.C, Guo, R.T, Zhang, Y.H.
Deposit date:2023-02-22
Release date:2023-09-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Nature, 621, 2023

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon