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6UXB
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BU of 6uxb by Molmil
MthK N-terminal truncation state 3 bound with calcium
Descriptor: Calcium-gated potassium channel MthK
Authors:Chen, F, Crina, N.
Deposit date:2019-11-07
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Ball-and-chain inactivation in a calcium-gated potassium channel.
Nature, 580, 2020
5T5K
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BU of 5t5k by Molmil
Structure of histone-based chromatin in Archaea
Descriptor: CACODYLATE ION, DNA (90-MER), DNA-binding protein HMf-2
Authors:Bhattacharyya, S, Mattiroli, F, Dyer, P.N, Sandman, K, Reeve, J.N, Luger, K.
Deposit date:2016-08-31
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of histone-based chromatin in Archaea.
Science, 357, 2017
6UXA
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BU of 6uxa by Molmil
MthK N-terminal truncation state 2 bound with calcium
Descriptor: Calcium-gated potassium channel MthK
Authors:Chen, F, Crina, N.
Deposit date:2019-11-07
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Ball-and-chain inactivation in a calcium-gated potassium channel.
Nature, 580, 2020
3NQ6
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BU of 3nq6 by Molmil
Crystal structure of the mutant P180A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor 6-azaUMP
Descriptor: 6-AZA URIDINE 5'-MONOPHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-06-29
Release date:2011-05-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.494 Å)
Cite:Crystal structure of the mutant P180A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor 6-azaUMP
To be Published
6UWN
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BU of 6uwn by Molmil
MthK N-terminal truncation RCK domain state 1 bound with calcium
Descriptor: CALCIUM ION, Calcium-gated potassium channel MthK
Authors:Chen, F, Crina, N.
Deposit date:2019-11-05
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ball-and-chain inactivation in a calcium-gated potassium channel.
Nature, 580, 2020
6UX7
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BU of 6ux7 by Molmil
MthK N-terminal truncation state 1 bound with calcium
Descriptor: Calcium-gated potassium channel MthK
Authors:Chen, F, Crina, N.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Ball-and-chain inactivation in a calcium-gated potassium channel.
Nature, 580, 2020
6UX4
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BU of 6ux4 by Molmil
MthK N-terminal truncation RCK domain state 2 bound with calcium
Descriptor: CALCIUM ION, Calcium-gated potassium channel MthK
Authors:Chen, F, Crina, N.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ball-and-chain inactivation in a calcium-gated potassium channel.
Nature, 580, 2020
4HZ3
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BU of 4hz3 by Molmil
MthK pore crystallized in presence of TBSb
Descriptor: Calcium-gated potassium channel mthK, HEXANE-1,6-DIOL, POTASSIUM ION
Authors:Posson, D.J, McCoy, J.G, Nimigean, C.M.
Deposit date:2012-11-14
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The voltage-dependent gate in MthK potassium channels is located at the selectivity filter.
Nat.Struct.Mol.Biol., 20, 2013
4M2K
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BU of 4m2k by Molmil
Crystal structure of PLP-dependent cyclase OrfR in complex with PLP
Descriptor: Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chang, C.Y, Liu, Y.C, Lyu, S.Y, Wu, C.C, Li, T.L.
Deposit date:2013-08-05
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biosynthesis of streptolidine involved two unexpected intermediates produced by a dihydroxylase and a cyclase through unusual mechanisms.
Angew.Chem.Int.Ed.Engl., 53, 2014
1DVJ
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BU of 1dvj by Molmil
CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE COMPLEXED WITH 6-AZAUMP
Descriptor: 6-AZA URIDINE 5'-MONOPHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Authors:Wu, N, Mo, Y, Gao, J, Pai, E.F.
Deposit date:2000-03-30
Release date:2000-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Electrostatic stress in catalysis: structure and mechanism of the enzyme orotidine monophosphate decarboxylase.
Proc.Natl.Acad.Sci.USA, 97, 2000
1DV7
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BU of 1dv7 by Molmil
CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE
Descriptor: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Authors:Wu, N, Mo, Y, Gao, J, Pai, E.F.
Deposit date:2000-01-20
Release date:2000-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Electrostatic stress in catalysis: structure and mechanism of the enzyme orotidine monophosphate decarboxylase.
Proc.Natl.Acad.Sci.USA, 97, 2000
4KK2
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BU of 4kk2 by Molmil
Crystal structure of a chimeric FPP/GFPP synthase (TARGET EFI-502313c) from Artemisia spiciformiS (1-72:GI751454468,73-346:GI75233326), apo structure
Descriptor: Monoterpene synthase FDS-5, chloroplastic - Farnesyl diphosphate synthase 1 chimera
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-05-05
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a chimeric FPP/GFPP synthase (TARGET EFI-502313c) from Artemisia spiciformis (1-72:GI751454468,73-346:GI75233326), apo structure
To be Published
3SIZ
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BU of 3siz by Molmil
Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
Deposit date:2011-06-20
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.321 Å)
Cite:Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
To be Published
3R65
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BU of 3r65 by Molmil
MthK channel pore E92Q mutant
Descriptor: Calcium-gated potassium channel mthK, POTASSIUM ION
Authors:Shi, N, Zeng, W, Ye, S, Li, Y, Jiang, Y.
Deposit date:2011-03-21
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crucial points within the pore as determinants of K+ channel conductance and gating
J.Mol.Biol., 411, 2011
1PBJ
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BU of 1pbj by Molmil
CBS domain protein
Descriptor: MAGNESIUM ION, hypothetical protein
Authors:Cuff, M.E, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-05-14
Release date:2003-12-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of a hypothetical protein from M. thermautotrophicus reveals a novel fold and a pseudo 2-fold axis of symmetry
TO BE PUBLISHED
3W2X
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BU of 3w2x by Molmil
Crystal structure of DNA uridine endonuclease Mth212
Descriptor: Exodeoxyribonuclease, FORMIC ACID, MAGNESIUM ION
Authors:Tabata, N, Shida, T, Arai, R.
Deposit date:2012-12-06
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of DNA uridine endonuclease Mth212
To be Published
3WK3
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BU of 3wk3 by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate ethyl ester
Descriptor: 6-(ethoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK0
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BU of 3wk0 by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
Descriptor: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
7C31
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BU of 7c31 by Molmil
Crystal structure of the grapevine defensin VvK1
Descriptor: Knot1 domain-containing protein
Authors:Chen, M.W, Chang, S.C, Chandy, K.G, Luo, D.
Deposit date:2020-05-10
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci, 3, 2020
3WJY
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BU of 3wjy by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with 6-amino-UMP
Descriptor: 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3W2Y
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BU of 3w2y by Molmil
Crystal structure of DNA uridine endonuclease Mth212 mutant W205S
Descriptor: DI(HYDROXYETHYL)ETHER, Exodeoxyribonuclease, FORMIC ACID, ...
Authors:Tabata, N, Shida, T, Arai, R.
Deposit date:2012-12-06
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of DNA uridine endonuclease Mth212
To be Published
3WK1
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BU of 3wk1 by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate ethyl ester
Descriptor: 6-(ethoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJZ
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BU of 3wjz by Molmil
Orotidine 5'-monophosphate decarboxylase D75N mutant from M. thermoautotrophicus complexed with 6-amino-UMP
Descriptor: 6-AMINOURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK2
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BU of 3wk2 by Molmil
Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
Descriptor: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJW
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BU of 3wjw by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with 6-methyl-UMP
Descriptor: 6-methyluridine 5'-(dihydrogen phosphate), Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Kuroda, S, Pai, E.F, Miki, K.
Deposit date:2013-10-17
Release date:2013-12-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013

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