Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FQH
DownloadVisualize
BU of 6fqh by Molmil
GluA2(flop) S729C ligand binding core dimer bound to NBQX at 1.76 Angstrom resolution
Descriptor: 6-nitro-2,3-bis(oxidanylidene)-1,4-dihydrobenzo[f]quinoxaline-7-sulfonamide, Glutamate receptor 2,Glutamate receptor 2
Authors:Coombs, I.D, Soto, D, Gold, M.G, Farrant, M.F, Cull-Candy, S.G.
Deposit date:2018-02-14
Release date:2019-03-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.75940013 Å)
Cite:Homomeric GluA2(R) AMPA receptors can conduct when desensitized.
Nat Commun, 10, 2019
5J1T
DownloadVisualize
BU of 5j1t by Molmil
TorsinAdeltaE-LULL1 complex, H. sapiens, bound to VHH-BS2
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
Authors:Demircioglu, F.E, Schwartz, T.U.
Deposit date:2016-03-29
Release date:2016-08-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:Structures of TorsinA and its disease-mutant complexed with an activator reveal the molecular basis for primary dystonia.
Elife, 5, 2016
9HIS
DownloadVisualize
BU of 9his by Molmil
Extracellular components BamHIJK of the Bacteroides thetaiotaomicron BAM machinery
Descriptor: (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, DUF4270 domain-containing protein, DUF4827 domain-containing protein, ...
Authors:Silale, A, van den Berg, B.
Deposit date:2024-11-27
Release date:2025-08-27
Last modified:2025-11-19
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structure of a distinct beta-barrel assembly machinery complex in the Bacteroidota.
Nat Microbiol, 10, 2025
6X3L
DownloadVisualize
BU of 6x3l by Molmil
Sortilin-Progranulin Interaction With Compound 2
Descriptor: 1-benzyl-3-tert-butyl-1H-pyrazole-5-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Parthasarathy, G, Soisson, S.M.
Deposit date:2020-05-21
Release date:2020-08-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Identification of potent inhibitors of the sortilin-progranulin interaction.
Bioorg.Med.Chem.Lett., 30, 2020
9HJ3
DownloadVisualize
BU of 9hj3 by Molmil
Bacteroides thetaiotaomicron BAM complex
Descriptor: (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, DUF4270 domain-containing protein, DUF4827 domain-containing protein, ...
Authors:Silale, A, van den Berg, B.
Deposit date:2024-11-27
Release date:2025-08-27
Last modified:2025-11-19
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure of a distinct beta-barrel assembly machinery complex in the Bacteroidota.
Nat Microbiol, 10, 2025
6DO6
DownloadVisualize
BU of 6do6 by Molmil
NMR solution structure of wild type apo hFABP1 at 308 K
Descriptor: Fatty acid-binding protein, liver
Authors:Scanlon, M.J, Mohanty, B, Doak, B.C, Patil, R.
Deposit date:2018-06-09
Release date:2018-12-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A ligand-induced structural change in fatty acid-binding protein 1 is associated with potentiation of peroxisome proliferator-activated receptor alpha agonists.
J. Biol. Chem., 294, 2019
4U4C
DownloadVisualize
BU of 4u4c by Molmil
The molecular architecture of the TRAMP complex reveals the organization and interplay of its two catalytic activities
Descriptor: 1,2-ETHANEDIOL, ATP-dependent RNA helicase DOB1, CHLORIDE ION, ...
Authors:Falk, S, Weir, J.R, Hentschel, J, Reichelt, P, Bonneau, F, Conti, E.
Deposit date:2014-07-23
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Molecular Architecture of the TRAMP Complex Reveals the Organization and Interplay of Its Two Catalytic Activities.
Mol.Cell, 55, 2014
8OXZ
DownloadVisualize
BU of 8oxz by Molmil
Rat alpha5beta1 integrin, headpiece
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin beta-1, Integrin subunit alpha 5
Authors:Roderer, D, Dransart, E, Shafaq-Zadah, M, Bartels, R, Johannes, L.
Deposit date:2023-05-03
Release date:2024-11-13
Last modified:2025-11-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Spatial N-glycan rearrangement on alpha 5 beta 1 integrin nucleates galectin-3 oligomers to determine endocytic fate.
Nat Commun, 16, 2025
8S6Z
DownloadVisualize
BU of 8s6z by Molmil
CD28 in complex with the antibody Fab fragment AI3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Majocchi, S, Giovanni, M, Malinge, P, Fischer, N, Svensson, L.A, Kelpsas, V, Rose, N.C.
Deposit date:2024-02-28
Release date:2024-12-18
Last modified:2025-03-12
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:NI-3201 Is a Bispecific Antibody Mediating PD-L1-Dependent CD28 Co-stimulation on T Cells for Enhanced Tumor Control.
Cancer Immunol Res, 13, 2025
5ZBJ
DownloadVisualize
BU of 5zbj by Molmil
Crystal structure of type-I LOG from Pseudomonas aeruginosa PAO1
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, IMIDAZOLE, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-02-12
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural insight into molecular mechanism of cytokinin activating protein from Pseudomonas aeruginosa PAO1.
Environ. Microbiol., 20, 2018
5OHS
DownloadVisualize
BU of 5ohs by Molmil
A GH31 family sulfoquinovosidase mutant D455N in complex with pNPSQ
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 4-nitrophenyl alpha-D-6-sulfoquinovoside, ...
Authors:Jin, Y, Williams, S.J, Goddard-Borger, E, Davies, G.J.
Deposit date:2017-07-18
Release date:2018-08-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural and Biochemical Insights into the Function and Evolution of Sulfoquinovosidases.
ACS Cent Sci, 4, 2018
8JE9
DownloadVisualize
BU of 8je9 by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannobiose-bound form (CGL1/Man(alpha)1-2Man)
Descriptor: ACETIC ACID, CACODYLATE ION, Natterin-3, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
6TME
DownloadVisualize
BU of 6tme by Molmil
Monomeric LRX8 in complex with RALF4.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(3-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Moussu, S, Caroline, C, Santos-Fernandez, G, Wehrle, S, Grossniklaus, U, Santiago, J.
Deposit date:2019-12-04
Release date:2020-03-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural basis for recognition of RALF peptides by LRX proteins during pollen tube growth.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YZ4
DownloadVisualize
BU of 6yz4 by Molmil
Crystal structure of MKK7 (MAP2K7) with ibrutinib bound at allosteric site
Descriptor: 1,2-ETHANEDIOL, 1-{(3R)-3-[4-amino-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl}prop-2-en-1-one, DIMETHYL SULFOXIDE, ...
Authors:Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-05-06
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Catalytic Domain Plasticity of MKK7 Reveals Structural Mechanisms of Allosteric Activation and Diverse Targeting Opportunities.
Cell Chem Biol, 27, 2020
7CKO
DownloadVisualize
BU of 7cko by Molmil
Cryo-EM structure of the human MCT1/Basigin-2 complex in the presence of anti-cancer drug candidate 7ACC2 in the inward-open conformation
Descriptor: 7-[methyl-(phenylmethyl)amino]-2-oxidanylidene-chromene-3-carboxylic acid, Basigin, Monocarboxylate transporter 1
Authors:Wang, N, Jiang, X, Zhang, S, Zhu, A, Yuan, Y, Lei, J, Yan, C.
Deposit date:2020-07-18
Release date:2020-12-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis of human monocarboxylate transporter 1 inhibition by anti-cancer drug candidates.
Cell, 184, 2021
9QCU
DownloadVisualize
BU of 9qcu by Molmil
Crystal structure of Rhizobium etli L-asparaginase ReAV S48A mutant
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Pokrywka, K, Grzechowiak, M, Loch, J.I, Ruszkowski, M, Gilski, M, Jaskolski, M.
Deposit date:2025-03-05
Release date:2025-07-16
Last modified:2025-08-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Probing the Active Site of Class 3 L-Asparaginase by Mutagenesis: Mutations of the Ser-Lys Tandems of ReAV.
Biomolecules, 15, 2025
5EU1
DownloadVisualize
BU of 5eu1 by Molmil
CRYSTAL STRUCTURE OF BRD9 IN COMPLEX WITH BI-7273
Descriptor: 4-[4-[(dimethylamino)methyl]-3,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, BRD9
Authors:Bader, G, Martin, L.M, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-11-18
Release date:2016-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
4RUL
DownloadVisualize
BU of 4rul by Molmil
Crystal structure of full-length E.Coli topoisomerase I in complex with ssDNA
Descriptor: DNA topoisomerase 1, GLYCEROL, SULFATE ION, ...
Authors:Tan, K, Chen, B, Tse-Dinh, Y.C.
Deposit date:2014-11-20
Release date:2015-11-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for suppression of hypernegative DNA supercoiling by E. coli topoisomerase I.
Nucleic Acids Res., 43, 2015
6G0G
DownloadVisualize
BU of 6g0g by Molmil
BRD4 (BD1) in complex with APSC-derived ligands (e.g. sulfasalazine)
Descriptor: 1,2-ETHANEDIOL, 2-HYDROXY-(5-([4-(2-PYRIDINYLAMINO)SULFONYL]PHENYL)AZO)BENZOIC ACID, Bromodomain-containing protein 4, ...
Authors:Humbeck, L, Pretzel, J.
Deposit date:2018-03-18
Release date:2020-01-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.478 Å)
Cite:Discovery of an Unexpected Similarity in Ligand Binding Between BRD4 and PPARgamma
Chemrxiv, 2019
7LAZ
DownloadVisualize
BU of 7laz by Molmil
Crystal structure of the first bromodomain (BD1) of human BRD3 bound to ERK5-IN-1
Descriptor: 11-cyclopentyl-2-({2-ethoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 3
Authors:Karim, M.R, Bikowitz, M.J, Schonbrunn, E.
Deposit date:2021-01-07
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors.
J.Med.Chem., 64, 2021
7LFK
DownloadVisualize
BU of 7lfk by Molmil
MODEL OF MHC CLASS Ib H2-M3 WITH MOUSE ND1 N-TERMINAL HEPTAPEPTIDE, THR MUTANT, REFINED AT 1.60 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, Heptapeptide from NADH-ubiquinone oxidoreductase chain 1, ...
Authors:Tomchick, D.R, Deisenhofer, J, Shen, S.
Deposit date:2021-01-17
Release date:2021-07-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and dynamics of major histocompatibility class Ib molecule H2-M3 complexed with mitochondrial-derived peptides.
J.Biomol.Struct.Dyn., 40, 2022
6C7Q
DownloadVisualize
BU of 6c7q by Molmil
BRD4 BD2 in complex with compound CE277
Descriptor: 7-(3,5-dimethyl-1,2-oxazol-4-yl)-6-methoxy-2-methyl-N-(1-methyl-1H-indazol-3-yl)-9H-pyrimido[4,5-b]indol-4-amine, Bromodomain-containing protein 4
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2018-01-23
Release date:2018-08-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure-Based Discovery of CF53 as a Potent and Orally Bioavailable Bromodomain and Extra-Terminal (BET) Bromodomain Inhibitor.
J. Med. Chem., 61, 2018
6D6L
DownloadVisualize
BU of 6d6l by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 14
Descriptor: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-chlorobenzoate, Transcriptional activator protein LasR
Authors:Dong, S.H, Nair, S.K.
Deposit date:2018-04-21
Release date:2018-08-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6LPV
DownloadVisualize
BU of 6lpv by Molmil
structure of Spermidine hydroxycinnamoyl transferases from Arabidopsis thaliana
Descriptor: COENZYME A, SPERMIDINE, Spermidine hydroxycinnamoyl transferase
Authors:Wang, C.Y, Zhang, P.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:Structural and Biochemical Insights Into Two BAHD Acyltransferases ( At SHT and At SDT) Involved in Phenolamide Biosynthesis.
Front Plant Sci, 11, 2020
5NRI
DownloadVisualize
BU of 5nri by Molmil
Crystal structure of Burkholderia pseudomallei D-alanine-D-alanine ligase in complex with AMP and D-Ala-D-Ala
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, D-ALANINE, ...
Authors:Diaz-Saez, L, Hunter, W.N.
Deposit date:2017-04-23
Release date:2018-05-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Burkholderia pseudomallei d-alanine-d-alanine ligase; detailed characterisation and assessment of a potential antibiotic drug target.
Febs J., 2019

245396

건을2025-11-26부터공개중

PDB statisticsPDBj update infoContact PDBjnumon