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5WJO
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BU of 5wjo by Molmil
Crystal structure of the unliganded PG90 TCR
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PG90 TCR alpha chain, ...
Authors:Shahine, A, Gras, S, Rossjohn, J.
Deposit date:2017-07-24
Release date:2017-10-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A molecular basis of human T cell receptor autoreactivity toward self-phospholipids.
Sci Immunol, 2, 2017
5DEV
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BU of 5dev by Molmil
High resolution structure of CCG DNA repeats at 1.71 angstrom resolution
Descriptor: DNA (5'-D(*TP*CP*CP*GP*CP*CP*GP*CP*CP*GP*A)-3')
Authors:Hou, M.H, Jhan, C.R.
Deposit date:2015-08-26
Release date:2016-09-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:High resolution structure of CCG DNA repeats at 1.71 angstrom resolution
To Be Published
7UVG
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BU of 7uvg by Molmil
First cohesin of Sca5 from Ruminococcus bromii
Descriptor: 1,2-ETHANEDIOL, Coh5, IODIDE ION
Authors:Cerqueira, F, Koropatkin, N.
Deposit date:2022-05-01
Release date:2023-05-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures of Sca5 cohesin modules from Ruminococcus bromii
To Be Published
9MZT
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BU of 9mzt by Molmil
F pilus filament from conjugative plasmid pED208
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, Pilin
Authors:Lea, S, Deme, J, Lungren, C.A.K.
Deposit date:2025-01-23
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:F pilus filament from conjugative plasmid pED208
To Be Published
8FKJ
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BU of 8fkj by Molmil
Yeast ATP Synthase in conformation-3, at pH 6
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, mitochondrial, ...
Authors:Sharma, S, Patel, H, Luo, M, Mueller, D.M, Liao, M.
Deposit date:2022-12-21
Release date:2024-01-24
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Conformational ensemble of yeast ATP synthase at low pH reveals unique intermediates and plasticity in F 1 -F o coupling.
Nat.Struct.Mol.Biol., 31, 2024
6UCX
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BU of 6ucx by Molmil
S2 symmetric peptide design number 1, Wednesday
Descriptor: S2-1, Wednesday, trifluoroacetic acid
Authors:Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
Deposit date:2019-09-18
Release date:2020-09-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
6UDZ
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BU of 6udz by Molmil
S2 symmetric peptide design number 4 crystal form 1, Pugsley
Descriptor: S2-4, Pusgley crystal form 1, trifluoroacetic acid
Authors:Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
7UG8
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BU of 7ug8 by Molmil
Crystal structure of a solute receptor from Synechococcus CC9311 in complex with alpha-ketovaleric and calcium
Descriptor: 1,2-ETHANEDIOL, 2-oxopentanoic acid, CALCIUM ION, ...
Authors:Shah, B.S, Mikolajek, H, Orr, C.M, Mykhaylyk, V, Owens, R.J, Paulsen, I.T.
Deposit date:2022-03-24
Release date:2023-04-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Crystal structure of a solute receptor from Synechococcus CC9311 in complex with alpha-ketovaleric and calcium
To Be Published
6P1B
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BU of 6p1b by Molmil
Transcription antitermination factor Q21
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Q protein
Authors:Yin, Z, Ebright, R.H.
Deposit date:2019-05-19
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.942 Å)
Cite:Structural basis of Q-dependent antitermination.
Proc.Natl.Acad.Sci.USA, 116, 2019
7UGA
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BU of 7uga by Molmil
Solution structure of NPSL2
Descriptor: NPSL2 RNA (43-MER)
Authors:Liu, Y, Keane, S.C.
Deposit date:2022-03-24
Release date:2022-04-13
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution Structure of NPSL2, A Regulatory Element in the oncomiR-1 RNA.
J.Mol.Biol., 434, 2022
6P88
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BU of 6p88 by Molmil
E.coli LpxD in complex with compound 6
Descriptor: 3-hydroxy-7,7-dimethyl-2-phenyl-4-(thiophen-2-yl)-2,6,7,8-tetrahydro-5H-pyrazolo[3,4-b]quinolin-5-one, MAGNESIUM ION, N-{3-[(furan-2-carbonyl)amino]phenyl}-2,3-dihydro-1,4-benzodioxine-6-carboxamide, ...
Authors:Ma, X, Shia, S.
Deposit date:2019-06-06
Release date:2019-08-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Biological Basis of Small Molecule Inhibition ofEscherichia coliLpxD Acyltransferase Essential for Lipopolysaccharide Biosynthesis.
Acs Infect Dis., 6, 2020
6X83
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BU of 6x83 by Molmil
Crystal Structure of TNFalpha with fragment compound 6
Descriptor: 1-benzyl-1H-benzimidazole, Tumor necrosis factor
Authors:Longenecker, K.L, Stoll, V.S.
Deposit date:2020-06-01
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design.
J.Med.Chem., 64, 2021
8FPX
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BU of 8fpx by Molmil
Crystal structure of tumor related RhoA mutant A161P in complex with GDP
Descriptor: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lin, Y, Zheng, Y.
Deposit date:2023-01-05
Release date:2024-06-05
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Tumor-derived RHOA mutants interact with effectors in the GDP-bound state.
Nat Commun, 15, 2024
6P7G
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BU of 6p7g by Molmil
The co-crystal structure of BRAF(V600E) with PHI1
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-[(imidazo[1,2-b]pyridazin-3-yl)ethynyl]-4-methyl-N-[4-({[2-(morpholin-4-yl)ethyl]amino}methyl)-3-(trifluoromethyl)phenyl]benzamide, Serine/threonine-protein kinase B-raf
Authors:Agianian, B, Gavathiotis, E.
Deposit date:2019-06-05
Release date:2020-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Inhibitors of BRAF dimers using an allosteric site.
Nat Commun, 11, 2020
9CJM
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BU of 9cjm by Molmil
Red fluorescent protein mRuby3
Descriptor: 1,2-ETHANEDIOL, Red fluorescent protein mRuby3
Authors:Huang, M, Ng, H.L, Geisbrecht, B.V, Duan, H, Deng, M, Chu, J.
Deposit date:2024-07-07
Release date:2025-10-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal model of the red fluorescent protein mRuby3
To Be Published
8G7B
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BU of 8g7b by Molmil
SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-3, Spike glycoprotein
Authors:Ye, G, Bu, F, Liu, B, Li, F.
Deposit date:2023-02-16
Release date:2024-02-21
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3
To Be Published
8GUZ
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BU of 8guz by Molmil
Crystal structure of anti-FIXa IgG fab with FAST-Ig mutations
Descriptor: 1,2-ETHANEDIOL, Anti-factor IXa IgG fab heavy chain, Anti-factor IXa IgG fab light chain
Authors:Koga, H, Yamano, T, Fukami, T.A, Sampei, Z, Shiraiwa, H, Torizawa, T.
Deposit date:2022-09-14
Release date:2023-06-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Efficient production of bispecific antibody by FAST-Ig TM and its application to NXT007 for the treatment of hemophilia A.
Mabs, 15, 2023
9B1B
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BU of 9b1b by Molmil
EV-D68 in complex with inhibitor Jun11-78-7
Descriptor: 4-[(propan-2-yl)oxy]-N-{(4M)-4-[1-(2,2,2-trifluoroethyl)-1H-pyrazol-4-yl]quinolin-8-yl}benzamide, Capsid protein VP1, Capsid protein VP4, ...
Authors:Klose, T, Kuhn, R.J, Jun, W, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-03-13
Release date:2025-03-19
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Design of enterovirus D68 capsid inhibitors with in vivo antiviral efficacy
To Be Published
6UWK
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BU of 6uwk by Molmil
Engineered variant of I-OnuI meganuclease with improved stability and fully altered specificity targeting human chromosome 11 trans integration site
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA (27-MER), ...
Authors:Werther, R, Stoddard, B.L.
Deposit date:2019-11-05
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.533 Å)
Cite:Optimization of Protein Thermostability and Exploitation of Recognition Behavior to Engineer Altered Protein-DNA Recognition.
Structure, 28, 2020
9AZW
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BU of 9azw by Molmil
Crystal structure of PDC-88 beta-lactamase in complex with taniborbactam
Descriptor: (3~{R})-3-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid, Beta-lactamase
Authors:Kumar, V, van den Akker, F.
Deposit date:2024-03-11
Release date:2025-03-19
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure and mechanism of taniborbactam inhibition of the cefepime-hydrolyzing, partial R2-loop deletion Pseudomonas -derived cephalosporinase variant PDC-88.
Antimicrob.Agents Chemother., 69, 2025
9B2Q
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BU of 9b2q by Molmil
Crystal Structure of Pantothenate Synthetase from Candida albicans.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Regan, J, Avad, K.A, Alaidi, O, Seetharaman, J, Palmer, G.E, Hevener, K.E.
Deposit date:2024-03-15
Release date:2025-03-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Small molecule inhibitors of fungal pantothenate synthetase can provide a valid and potentially efficacious strategy for antifungal development.
To Be Published
9B18
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BU of 9b18 by Molmil
EV-D68 in complex with inhibitor Jun11-53-7
Descriptor: (4M)-4-[1-(2-methoxyethyl)-1H-pyrazol-4-yl]-N-({4-[(propan-2-yl)oxy]phenyl}methyl)quinolin-8-amine, Capsid protein VP1, Capsid protein VP4, ...
Authors:Klose, T, Kuhn, R.J, Jun, W, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-03-13
Release date:2025-03-19
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Design of enterovirus D68 capsid inhibitors with in vivo antiviral efficacy
To Be Published
8ZKO
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BU of 8zko by Molmil
CryoEM structure of Thyroid Hormone Transporter MCT8
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 3,5,3'TRIIODOTHYRONINE, Monocarboxylate transporter 8
Authors:Tan, J, Xiao, Y, Kong, F, Zhu, A, Qian, J, Yan, C.
Deposit date:2024-05-17
Release date:2025-04-02
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural insights into thyroid hormone transporter MCT8.
Nat Commun, 16, 2025
8J1C
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BU of 8j1c by Molmil
Structure of amino acid dehydrogenase in complex with NADP
Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, LYSINE, ...
Authors:Sakuraba, H, Ohshima, T.
Deposit date:2023-04-12
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family.
Int.J.Biol.Macromol., 249, 2023
8J1G
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BU of 8j1g by Molmil
Structure of amino acid dehydrogenase in complex with NADPH
Descriptor: 1,2-ETHANEDIOL, ARGININE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sakuraba, H, Ohshima, T.
Deposit date:2023-04-12
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family.
Int.J.Biol.Macromol., 249, 2023

245396

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