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5UZB
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BU of 5uzb by Molmil
Cryo-EM structure of the MAL TIR domain filament
Descriptor: Toll/interleukin-1 receptor domain-containing adapter protein
Authors:Ve, T, Vajjhala, P.R, Hedger, A, Croll, T, DiMaio, F, Horsefield, S, Yu, X, Lavrencic, P, Hassan, Z, Morgan, G.P, Mansell, A, Mobli, M, O'Carrol, A, Chauvin, B, Gambin, Y, Sierecki, E, Landsberg, M.J, Stacey, K.J, Egelman, E.H, Kobe, B.
Deposit date:2017-02-25
Release date:2017-07-26
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling.
Nat. Struct. Mol. Biol., 24, 2017
2NPG
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BU of 2npg by Molmil
An unusual twin-His arrangement in the pore of ammonia channels is essential for substrate conductance
Descriptor: ACETATE ION, Ammonia channel, GLYCEROL, ...
Authors:Lupo, D, Winkler, F.K.
Deposit date:2006-10-27
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:An unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance
J.Biol.Chem., 281, 2006
3J6M
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BU of 3j6m by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackievirus and adenovirus receptor
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
2NPY
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BU of 2npy by Molmil
Crystal Structure of a junctioned hairpin ribozyme incorporating 9atom linker and 2'-deoxy 2'-amino U at A-1
Descriptor: 2-[2-(2-HYDROXYETHOXY)ETHOXY]ETHYL DIHYDROGEN PHOSPHATE, 5'-R(*CP*GP*GP*UP*GP*AP*GP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', ...
Authors:MacElrevey, C, Krucinska, J, Wedekind, J.E.
Deposit date:2006-10-30
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A posteriori design of crystal contacts to improve the X-ray diffraction properties of a small RNA enzyme.
Acta Crystallogr.,Sect.D, 63, 2007
3J6O
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BU of 3j6o by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackie and adenovirus receptor
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
1QLE
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BU of 1qle by Molmil
CRYO-STRUCTURE OF THE PARACOCCUS DENITRIFICANS FOUR-SUBUNIT CYTOCHROME C OXIDASE IN THE COMPLETELY OXIDIZED STATE COMPLEXED WITH AN ANTIBODY FV FRAGMENT
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CCYTOCHROME C OXIDASE, ...
Authors:Harrenga, A, Michel, H.
Deposit date:1999-08-30
Release date:1999-12-02
Last modified:2022-05-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Cytochrome C Oxidase from Paracoccus Denitrificans Does not Change the Metal Center Ligation Upon Reduction
J.Biol.Chem., 274, 1999
5UO2
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BU of 5uo2 by Molmil
Structure of human neuronal nitric oxide synthase heme domain in complex with 7-[(3-Ethyl-5-((methylamino)methyl)phenoxy)methyl]quinolin-2-amine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-({3-ethyl-5-[(methylamino)methyl]phenoxy}methyl)quinolin-2-amine, GLYCEROL, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
3J6R
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BU of 3j6r by Molmil
Electron cryo-microscopy of Human Papillomavirus Type 16 capsid
Descriptor: Major capsid protein L1
Authors:Cardone, G, Moyer, A.L, Cheng, N, Thompson, C.D, Dvoretzky, I, Lowy, D.R, Schiller, J.T, Steven, A.C, Buck, C.B, Trus, B.L.
Deposit date:2014-03-20
Release date:2014-07-23
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Maturation of the human papillomavirus 16 capsid.
MBio, 5, 2014
2MTA
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BU of 2mta by Molmil
CRYSTAL STRUCTURE OF A TERNARY ELECTRON TRANSFER COMPLEX BETWEEN METHYLAMINE DEHYDROGENASE, AMICYANIN AND A C-TYPE CYTOCHROME
Descriptor: AMICYANIN, COPPER (II) ION, CYTOCHROME C551I, ...
Authors:Chen, L, Mathews, F.S.
Deposit date:1993-10-26
Release date:1994-01-31
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of an electron transfer complex: methylamine dehydrogenase, amicyanin, and cytochrome c551i.
Science, 264, 1994
1QN0
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BU of 1qn0 by Molmil
SOLUTION STRUCTURE OF DESULFOVIBRIO GIGAS FERROCYTOCHROME C3, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C3, HEME C
Authors:Messias, A.C, Teodoro, M.L, Brennan, L, Legall, J, Santos, H, Xavier, A.V, Turner, D.L.
Deposit date:1999-10-11
Release date:2000-10-12
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Structural Basis for the Network of Functional Cooperativities in Cytochrome C3 from Desulfovibrio Gigas: Solution Structures of the Oxidised and Reduced States
J.Mol.Biol., 298, 2000
5UOG
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BU of 5uog by Molmil
Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc04462 (SmGhrB) from Sinorhizobium meliloti in apo form
Descriptor: NADPH-dependent glyoxylate/hydroxypyruvate reductase, SULFATE ION
Authors:Shabalin, I.G, Handing, K.B, Gasiorowska, O.A, Cooper, D.R, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2017-01-31
Release date:2017-02-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
1QO6
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BU of 1qo6 by Molmil
Solution structure of a pair of modules from the gelatin-binding domain of fibronectin
Descriptor: FIBRONECTIN
Authors:Bocquier, A.A, Potts, J.R, Pickford, A.R, Campbell, I.D.
Deposit date:1999-11-04
Release date:2000-01-11
Last modified:2018-01-17
Method:SOLUTION NMR
Cite:Solution Structure of a Pair of Modules from the Gelatin-Binding Domain of Fibronectin
Structure, 7, 1999
3J99
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BU of 3j99 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State IIIb)
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
Deposit date:2014-12-05
Release date:2015-01-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
5GIO
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BU of 5gio by Molmil
Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates
Descriptor: 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
Authors:Yang, Z, Lin, J, Ye, K.
Deposit date:2016-06-24
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.604 Å)
Cite:Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
2N5R
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BU of 2n5r by Molmil
NMR structure of cFLIP-derived calmodulin binding peptide
Descriptor: CASP8 and FADD-like apoptosis regulator
Authors:Panaitiu, A.E.
Deposit date:2015-07-24
Release date:2015-11-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Identification and Characterization of the Interaction Site between cFLIPL and Calmodulin.
Plos One, 10, 2015
3J9O
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BU of 3j9o by Molmil
CryoEM structure of a type VI secretion system
Descriptor: Intracellular growth locus protein A, Intracellular growth locus protein B
Authors:Clemens, D.L, Ge, P, Lee, B.-Y, Horwitz, M.A, Zhou, Z.H.
Deposit date:2015-02-11
Release date:2015-03-18
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Atomic Structure of T6SS Reveals Interlaced Array Essential to Function.
Cell(Cambridge,Mass.), 160, 2015
1QRW
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BU of 1qrw by Molmil
CRYSTAL STRUCTURE OF AN ALPHA-LYTIC PROTEASE MUTANT WITH ACCELERATED FOLDING KINETICS, R102H/G134S, PH 8
Descriptor: ALHPA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Derman, A.I, Mau, T, Agard, D.A.
Deposit date:1999-06-16
Release date:1999-06-18
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease
To be Published, 1999
2MPE
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BU of 2mpe by Molmil
Solution NMR structure for B. pseudomallei BPSL1050
Descriptor: BPSL1050
Authors:Gaudesi, D, Musco, G, Quilici, G.
Deposit date:2014-05-15
Release date:2015-03-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure-Based Design of a B Cell Antigen from B. pseudomallei.
Acs Chem.Biol., 10, 2015
3JRY
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BU of 3jry by Molmil
Human Serum albumin with bound Sulfate
Descriptor: SULFATE ION, Serum albumin
Authors:Hein, K.L, Kragh-Hansen, U, Morth, J.P, Nissen, P.
Deposit date:2009-09-09
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic analysis reveals a unique lidocaine binding site on human serum albumin.
J.Struct.Biol., 171, 2010
3JBQ
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BU of 3jbq by Molmil
Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6
Descriptor: GafA domain of cone phosphodiesterase 6C, GafB domain of phosphodiesterase 2A, IgG1-kappa 2E8 heavy chain, ...
Authors:Zhang, Z, He, F, Constantine, R, Baker, M.L, Baehr, W, Schmid, M.F, Wensel, T.G, Agosto, M.A.
Deposit date:2015-09-17
Release date:2015-09-30
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6.
J.Biol.Chem., 290, 2015
2N7L
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BU of 2n7l by Molmil
NMR structure of the N-domain of troponin C bound to the switch region of troponin I and the covalent levosimendan analog i9
Descriptor: CALCIUM ION, Troponin C/Troponin I chimera
Authors:Pineda Sanabria, S.E, Sykes, B.D, Robertson, I.M.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Troponin C with covalently bound levosimendan analog i9 enhances contraction in cardiac muscle fibers
To be Published
3JVJ
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BU of 3jvj by Molmil
Crystal structure of the bromodomain 1 in mouse Brd4
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, GLYCEROL
Authors:Vollmuth, F, Blankenfeldt, W, Geyer, M.
Deposit date:2009-09-17
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the Dual Bromodomains of the P-TEFb-activating Protein Brd4 at Atomic Resolution
J.Biol.Chem., 284, 2009
3AXM
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BU of 3axm by Molmil
Structure of rice Rubisco in complex with 6PG
Descriptor: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
Authors:Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
Deposit date:2011-04-11
Release date:2012-04-11
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
2NDL
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BU of 2ndl by Molmil
NMR solution structure of PawS Derived Peptide 22 (PDP-22)
Descriptor: PawS derived peptide
Authors:Franke, B, Jayasena, A.S, Fisher, M.F, Swedberg, J.E, Taylor, N.L, Mylne, J.S, Rosengren, K.
Deposit date:2016-07-17
Release date:2016-12-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Diverse cyclic seed peptides in the Mexican zinnia (Zinnia haageana).
Biopolymers, 106, 2016
5GU3
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BU of 5gu3 by Molmil
Crystal structure of Au(E).CL-apo-E45C/R52C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Maity, B, Abe, S, Ueno, T.
Deposit date:2016-08-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Observation of gold sub-nanocluster nucleation within a crystalline protein cage
Nat Commun, 8, 2017

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