Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4YBF
DownloadVisualize
BU of 4ybf by Molmil
Aspartic Proteinase Sapp2 Secreted from Candida Parapsilosis at 1.25 A Resolution
Descriptor: Candidapepsin-2, DI(HYDROXYETHYL)ETHER
Authors:Dostal, J, Hruskova-Heidingsfeldova, O, Rezacova, P, Brynda, J, Mareckova, L, Pichova, I.
Deposit date:2015-02-18
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Atomic resolution crystal structure of Sapp2p, a secreted aspartic protease from Candida parapsilosis.
Acta Crystallogr.,Sect.D, 71, 2015
1LIC
DownloadVisualize
BU of 1lic by Molmil
X-RAY CRYSTALLOGRAPHIC STRUCTURES OF ADIPOCYTE LIPID BINDING PROTEIN COMPLEXED WITH PALMITATE AND HEXADECANESULFONIC ACID. PROPERTIES OF CAVITY BINDING SITES.
Descriptor: 1-HEXADECANOSULFONIC ACID, ADIPOCYTE LIPID-BINDING PROTEIN, PROPANOIC ACID
Authors:Lalonde, J.M, Bernlohr, D.A, Banaszak, L.J.
Deposit date:1993-12-21
Release date:1994-04-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystallographic structures of adipocyte lipid-binding protein complexed with palmitate and hexadecanesulfonic acid. Properties of cavity binding sites.
Biochemistry, 33, 1994
5DJQ
DownloadVisualize
BU of 5djq by Molmil
The structure of CBB3 cytochrome oxidase.
Descriptor: CALCIUM ION, COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoN1, ...
Authors:Buschmann, S, Warkentin, E, Xie, H, Kohlstaedt, M, Langer, J.D, Ermler, U, Michel, H.
Deposit date:2015-09-02
Release date:2016-01-13
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structure of cbb3 cytochrome oxidase provides insights into proton pumping.
Science, 329, 2010
4HEJ
DownloadVisualize
BU of 4hej by Molmil
Discovery of Selective and Potent Inhibitors of Gram-positive Bacterial Thymidylate Kinase (TMK): Compund 16
Descriptor: 5-methyl-1-[(3S)-1-{3-[3-(trifluoromethyl)phenoxy]benzyl}piperidin-3-yl]pyrimidine-2,4(1H,3H)-dione, Thymidylate kinase
Authors:Martinez-Botella, G, Breen, J, Duffy, J, Dumas, J, Geng, B, Gowers, I, Green, O, Guler, S, Hentemann, M, Hernandez-Juan, F, Joseph-McCarthy, D, Kawatkar, S, Larsen, N, Lazari, O, Loch, J, Macritchie, J.
Deposit date:2012-10-03
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Selective and Potent Inhibitors of Gram-Positive Bacterial Thymidylate Kinase (TMK).
J.Med.Chem., 55, 2012
3GLG
DownloadVisualize
BU of 3glg by Molmil
Crystal Structure of a Mutant (gammaT157A) E. coli Clamp Loader Bound to Primer-Template DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*AP*TP*A)-3'), ...
Authors:Simonetta, K.R, Seyedin, S.N, Kuriyan, J.
Deposit date:2009-03-12
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.
Cell(Cambridge,Mass.), 137, 2009
2XTH
DownloadVisualize
BU of 2xth by Molmil
K2PtBr6 binding to lysozyme
Descriptor: HEXABROMOPLATINATE(IV), LYSOZYME C
Authors:Helliwell, J.R, Bell, A.M.T, Bryant, P, Fisher, S, Habash, J, Helliwell, M, Margiolaki, I, Kaenket, S, Watier, Y, Wright, J, Yalamanchili, S.K.
Deposit date:2010-10-07
Release date:2010-12-08
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Time-Dependent Analysis of K2Ptbr6 Binding to Lysozyme Studied by Protein Powder and Single Crystal X-Ray Analysis
Z.Kristallogr., 225, 2010
4H1V
DownloadVisualize
BU of 4h1v by Molmil
GMP-PNP bound dynamin-1-like protein GTPase-GED fusion
Descriptor: Dynamin-1-like protein, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Wenger, J, Klinglmayr, E, Eibl, C, Hessenberger, M, Goettig, P.
Deposit date:2012-09-11
Release date:2013-08-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional Mapping of Human Dynamin-1-Like GTPase Domain Based on X-ray Structure Analyses.
Plos One, 8, 2013
3HBE
DownloadVisualize
BU of 3hbe by Molmil
Class IV chitinase structure from Picea abies at 1.55A
Descriptor: 2-METHOXYETHANOL, ACETATE ION, Class IV chitinase Chia4-Pa2, ...
Authors:Ubhayasekera, W, Mowbray, S.L.
Deposit date:2009-05-04
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The first crystal structures of a family 19 class IV chitinase: the enzyme from Norway spruce.
Plant Mol.Biol., 71, 2009
3HBV
DownloadVisualize
BU of 3hbv by Molmil
PrtC methionine mutants: M226A in-house
Descriptor: CALCIUM ION, CHLORIDE ION, Secreted protease C, ...
Authors:Oberholzer, A.E, Bumann, M, Hege, T, Russo, S, Baumann, U.
Deposit date:2009-05-05
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site
Biol.Chem., 390, 2009
5DN2
DownloadVisualize
BU of 5dn2 by Molmil
Human NRP2 b1 domain in complex with the peptide corresponding to the C-terminus of VEGF-A
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, Neuropilin-2, ...
Authors:Tsai, Y.C.I, Frankel, P, Fotinou, C, Rana, R, Zachary, I, Djordjevic, S.
Deposit date:2015-09-09
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural studies of neuropilin-2 reveal a zinc ion binding site remote from the vascular endothelial growth factor binding pocket.
Febs J., 283, 2016
4H2G
DownloadVisualize
BU of 4h2g by Molmil
Human ecto-5'-nucleotidase (CD73): crystal form II (open) in complex with adenosine
Descriptor: 5'-nucleotidase, ADENOSINE, CALCIUM ION, ...
Authors:Straeter, N, Knapp, K.M, Zebisch, M, Pippel, J.
Deposit date:2012-09-12
Release date:2012-11-28
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
2Y3U
DownloadVisualize
BU of 2y3u by Molmil
Crystal structure of apo collagenase G from Clostridium histolyticum at 2.55 Angstrom resolution
Descriptor: CITRATE ANION, COLLAGENASE, DI(HYDROXYETHYL)ETHER, ...
Authors:Eckhard, U, Brandstetter, H.
Deposit date:2010-12-26
Release date:2011-09-28
Last modified:2011-10-19
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of Collagenase G Reveals a Chew-and -Digest Mechanism of Bacterial Collagenolysis
Nat.Struct.Mol.Biol., 18, 2011
4K07
DownloadVisualize
BU of 4k07 by Molmil
Crystal structure of the amyloid-forming immunoglobulin AL-103 cis-proline 95 mutant
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-103, SULFATE ION
Authors:Thompson, J.R, Berkholz, D.S, Mahlum, E.W, Ramirez-Alvarado, M.
Deposit date:2013-04-03
Release date:2013-10-30
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Kinetic control in protein folding for light chain amyloidosis and the differential effects of somatic mutations.
J.Mol.Biol., 426, 2014
2F3Y
DownloadVisualize
BU of 2f3y by Molmil
Calmodulin/IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, MAGNESIUM ION, ...
Authors:Fallon, J.L, Quiocho, F.A.
Deposit date:2005-11-22
Release date:2005-12-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of Calmodulin Bound to the Hydrophobic IQ Domain of the Cardiac Ca(v)1.2 Calcium Channel.
Structure, 13, 2005
2XRP
DownloadVisualize
BU of 2xrp by Molmil
Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, NEURONAL MIGRATION PROTEIN DOUBLECORTIN, ...
Authors:Fourniol, F.J, Sindelar, C.V, Amigues, B, Clare, D.K, Thomas, G, Perderiset, M, Francis, F, Houdusse, A, Moores, C.A.
Deposit date:2010-09-18
Release date:2010-11-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Template-Free 13-Protofilament Microtubule-Map Assembly Visualized at 8 A Resolution.
J.Cell Biol., 191, 2010
2XQR
DownloadVisualize
BU of 2xqr by Molmil
Crystal structure of plant cell wall invertase in complex with a specific protein inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hothorn, M, Van den Ende, W, Lammens, W, Rybin, V, Scheffzek, K.
Deposit date:2010-09-07
Release date:2010-10-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural Insights Into the Ph-Controlled Targeting of Plant Cell-Wall Invertase by a Specific Inhibitor Protein.
Proc.Natl.Acad.Sci.USA, 107, 2010
4ZKV
DownloadVisualize
BU of 4zkv by Molmil
Crystal structure of human histidine triad nucleotide-binding protein 1 (hHINT1) refined to 1.92A at P21 space group
Descriptor: Histidine triad nucleotide-binding protein 1, SULFATE ION
Authors:Dolot, R.M, Seda, A, Nawrot, B.
Deposit date:2015-04-30
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystallographic studies of the complex of human HINT1 protein with a non-hydrolyzable analog of Ap4A.
Int.J.Biol.Macromol., 87, 2016
2XTP
DownloadVisualize
BU of 2xtp by Molmil
Crystal structure of nucleotide-free human GIMAP2, amino acid residues 1-260
Descriptor: GTPASE IMAP FAMILY MEMBER 2
Authors:Schwefel, D, Froehlich, C, Daumke, O.
Deposit date:2010-10-11
Release date:2010-10-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis of Oligomerization in Septin-Like Gtpase of Immunity-Associated Protein 2 (Gimap2)
Proc.Natl.Acad.Sci.USA, 107, 2010
4K1Z
DownloadVisualize
BU of 4k1z by Molmil
Crystal structure of Canavalia boliviana lectin in complex with Man1-4Man-OMe
Descriptor: CADMIUM ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Bezerra, G.A, Viertlmayr, R, Moura, T.R, Delatorre, P, Rocha, B.A.M, Cavada, B.S, Gruber, K.
Deposit date:2013-04-07
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies of an Anti-Inflammatory Lectin from Canavalia boliviana Seeds in Complex with Dimannosides.
Plos One, 9, 2014
2EWJ
DownloadVisualize
BU of 2ewj by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked form
Descriptor: 5'-D(*T*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3', 5'-D(*TP*G*AP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3', DNA replication terminus site-binding protein, ...
Authors:Oakley, A.J, Mulcair, M.D, Schaeffer, P.M, Dixon, N.E.
Deposit date:2005-11-03
Release date:2006-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A molecular mousetrap determines polarity of termination of DNA replication in E. coli.
Cell(Cambridge,Mass.), 125, 2006
3GLF
DownloadVisualize
BU of 3glf by Molmil
Crystal Structure of the Ecoli Clamp Loader Bound to Primer-Template DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*AP*TP*A)-3'), ...
Authors:Simonetta, K.R, Kuriyan, J.
Deposit date:2009-03-12
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.388 Å)
Cite:The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.
Cell(Cambridge,Mass.), 137, 2009
5DQ4
DownloadVisualize
BU of 5dq4 by Molmil
Endothiapepsin in complex with fragment 66
Descriptor: 1-[6-(furan-2-yl)pyridin-3-yl]methanamine, Endothiapepsin, GLYCEROL
Authors:Radeva, N, Heine, A, Klebe, G.
Deposit date:2015-09-14
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
to be published
5DQN
DownloadVisualize
BU of 5dqn by Molmil
Polyethylene 600-bound form of P450 CYP125A3 mutant from Myobacterium Smegmatis - W83Y
Descriptor: CITRIC ACID, Cytochrome P450 CYP125, PENTAETHYLENE GLYCOL, ...
Authors:Ortiz de Montellano, P.J, Frank, D.J, Waddling, C.A.
Deposit date:2015-09-15
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Cytochrome P450 125A4, the Third Cholesterol C-26 Hydroxylase from Mycobacterium smegmatis.
Biochemistry, 54, 2015
3GQ0
DownloadVisualize
BU of 3gq0 by Molmil
The structure of the Caulobacter crescentus clpS protease adaptor protein - apo structure with no peptide
Descriptor: ATP-dependent Clp protease adapter protein clpS
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-03-23
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.066 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
2XVE
DownloadVisualize
BU of 2xve by Molmil
Crystal structure of bacterial flavin-containing monooxygenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FLAVIN-CONTAINING MONOOXYGENASE, GLYCEROL, ...
Authors:Cho, H.J, Kang, B.S.
Deposit date:2010-10-26
Release date:2011-05-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural and Functional Analysis of Bacterial Flavin-Containing Monooxygenase Reveals its Ping-Pong-Type Reaction Mechanism.
J.Struct.Biol., 175, 2011

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon