Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8WPQ
DownloadVisualize
BU of 8wpq by Molmil
Anabaena McyI R166M with prebound NAD and citrate
Descriptor: CITRATE ANION, McyI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, X, Yin, Y, Duan, Y, Liu, L.
Deposit date:2023-10-10
Release date:2024-10-16
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the catalytic mechanism of the microcystin tailoring enzyme McyI.
Commun Biol, 8, 2025
8WPJ
DownloadVisualize
BU of 8wpj by Molmil
Anabaena McyI with prebound NAD and soaked NAD
Descriptor: McyI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, X, Yin, Y, Duan, Y, Liu, L.
Deposit date:2023-10-10
Release date:2024-10-16
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the catalytic mechanism of the microcystin tailoring enzyme McyI.
Commun Biol, 8, 2025
8WPS
DownloadVisualize
BU of 8wps by Molmil
Anabaena McyI R166M with prebound NAD and malate
Descriptor: (2S)-2-hydroxybutanedioic acid, McyI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, X, Yin, Y, Duan, Y, Liu, L.
Deposit date:2023-10-10
Release date:2024-10-16
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the catalytic mechanism of the microcystin tailoring enzyme McyI.
Commun Biol, 8, 2025
9MDM
DownloadVisualize
BU of 9mdm by Molmil
Crystal Structure of C412S Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Descriptor: 1,2-ETHANEDIOL, Bacterial Ig-like domain protein C0362, PHOSPHATE ION, ...
Authors:Clark, N.D, Malkowski, M.G.
Deposit date:2024-12-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.
Acta Crystallogr.,Sect.F, 81, 2025
7CFU
DownloadVisualize
BU of 7cfu by Molmil
Crystal Structure of FMN-dependent Cysteine Decarboxylases SpaF
Descriptor: ARGININE, DNA/pantothenate metabolism flavoprotein, FLAVIN MONONUCLEOTIDE
Authors:Li, J, Lu, J, Wang, H, Zhu, J.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Characterization of FMN-dependent Cysteine Decarboxylases SPAF
To Be Published
3O7B
DownloadVisualize
BU of 3o7b by Molmil
Crystal structure of Archaeoglobus Fulgidus Nep1 bound to S-adenosylhomocysteine
Descriptor: Ribosome biogenesis Nep1 RNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, TYROSINE
Authors:Thomas, S.R, LaRonde-LeBlanc, N.
Deposit date:2010-07-30
Release date:2011-01-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insight into the functional mechanism of Nep1/Emg1 N1-specific pseudouridine methyltransferase in ribosome biogenesis.
Nucleic Acids Res., 39, 2011
5HU4
DownloadVisualize
BU of 5hu4 by Molmil
Cystal structure of listeria monocytogenes sortase A
Descriptor: Cysteine protease
Authors:Li, H.
Deposit date:2016-01-27
Release date:2017-02-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibition of sortase A by chalcone prevents Listeria monocytogenes infection.
Biochem. Pharmacol., 106, 2016
3BUS
DownloadVisualize
BU of 3bus by Molmil
Crystal Structure of RebM
Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:McCoy, J.G, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2008-01-03
Release date:2008-03-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure and mechanism of the rebeccamycin sugar 4'-O-methyltransferase RebM.
J.Biol.Chem., 283, 2008
1NW7
DownloadVisualize
BU of 1nw7 by Molmil
Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to S-ADENOSYL-L-HOMOCYSTEINE
Descriptor: CHLORIDE ION, MODIFICATION METHYLASE RSRI, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A.
Deposit date:2003-02-05
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding
J.Biol.Chem., 278, 2003
7EC0
DownloadVisualize
BU of 7ec0 by Molmil
Crystal structure of juvenile hormone acid methyltransferase JHAMT in complex with S-Adenosyl homocysteine and methyl farnesoate
Descriptor: Juvenile hormone acid methyltransferase, Methyl farnesoate, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Guo, P.C, Zhang, Y.S, Zhang, L, Xu, H.Y, Xia, Q.Y.
Deposit date:2021-03-11
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structural basis for juvenile hormone biosynthesis by the juvenile hormone acid methyltransferase.
J.Biol.Chem., 297, 2021
7EEW
DownloadVisualize
BU of 7eew by Molmil
Crystal structure of the intact MTase from Vibrio vulnificus YJ016 in complex with the DNA-mimicking Ocr protein and the S-adenosyl-L-homocysteine (SAH)
Descriptor: Overcome classical restriction gp0.3, S-ADENOSYL-L-HOMOCYSTEINE, Type I restriction-modification system methyltransferase subunit
Authors:Seo, P.W, Park, S.Y, Kim, J.S.
Deposit date:2021-03-19
Release date:2022-03-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.896 Å)
Cite:Structural features of a minimal intact methyltransferase of a type I restriction-modification system.
Int.J.Biol.Macromol., 208, 2022
5LA6
DownloadVisualize
BU of 5la6 by Molmil
Tubulin-pironetin complex
Descriptor: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Prota, A.E, Setter, J, Waight, A.B, Bargsten, K, Murga, J, Diaz, J.F, Steinmetz, M.O.
Deposit date:2016-06-13
Release date:2016-07-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pironetin Binds Covalently to alpha Cys316 and Perturbs a Major Loop and Helix of alpha-Tubulin to Inhibit Microtubule Formation.
J.Mol.Biol., 428, 2016
7OT7
DownloadVisualize
BU of 7ot7 by Molmil
sTIM11noCys-SB, a de novo designed TIM barrel with a salt-bridge cluster (crystal form 2)
Descriptor: sTIM11noCys-SB
Authors:Romero-Romero, S, Kordes, S, Hocker, B.
Deposit date:2021-06-09
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A newly introduced salt bridge cluster improves structural and biophysical properties of de novo TIM barrels.
Protein Sci., 31, 2022
1KYW
DownloadVisualize
BU of 1kyw by Molmil
Crystal Structure Analysis of Caffeic Acid/5-hydroxyferulic acid 3/5-O-methyltransferase in complex with 5-hydroxyconiferaldehyde
Descriptor: 5-(3,3-DIHYDROXYPROPENY)-3-METHOXY-BENZENE-1,2-DIOL, Caffeic acid 3-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Zubieta, C, Kota, P, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2002-02-06
Release date:2002-08-28
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the modulation of lignin monomer methylation by caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase.
Plant Cell, 14, 2002
7SU8
DownloadVisualize
BU of 7su8 by Molmil
DIHYDRONEOPTERIN ALDOLASE (DHNA) FROM YERSINIA PESTIS with alkylated Cys50 CO-CRYSTALLIZED with 7,8-dihydroneopterin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ETHYL-PYRROLIDINE-2,5-DIONE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Bourne, C.R.
Deposit date:2021-11-16
Release date:2022-12-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:DIHYDRONEOPTERIN ALDOLASE (DHNA) FROM YERSINIA PESTIS with alkylated Cys50 CO-CRYSTALLIZED with 7,8-dihydroneopterin
To Be Published
6ZK0
DownloadVisualize
BU of 6zk0 by Molmil
1.47A human IMPase with ebselen
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Inositol monophosphatase 1, ...
Authors:Bax, B.D, Fenn, G.D.
Deposit date:2020-06-29
Release date:2020-09-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystallization and structure of ebselen bound to Cys141 of human inositol monophosphatase.
Acta Crystallogr.,Sect.F, 76, 2020
2HRV
DownloadVisualize
BU of 2hrv by Molmil
2A CYSTEINE PROTEINASE FROM HUMAN RHINOVIRUS 2
Descriptor: 2A CYSTEINE PROTEINASE, ZINC ION
Authors:Petersen, J.F.W, Cherney, M.M, Liebig, H.-D, Skern, T, Kuechler, E, James, M.N.G.
Deposit date:1999-04-29
Release date:2000-05-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structure of the 2A proteinase from a common cold virus: a proteinase responsible for the shut-off of host-cell protein synthesis.
EMBO J., 18, 1999
5GYZ
DownloadVisualize
BU of 5gyz by Molmil
luciferase AMP/7-cy-L complex
Descriptor: (4S)-2-[6-(azepan-1-yl)-1,3-benzothiazol-2-yl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid, ADENOSINE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Su, J, Wang, F.
Deposit date:2016-09-26
Release date:2017-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of luciferase with AMP/7-cy-L at 2.4 Angstroms resolution
To Be Published
2E0K
DownloadVisualize
BU of 2e0k by Molmil
Crystal structure of CbiL, a methyltransferase involved in anaerobic vitamin B12 biosynthesis
Descriptor: Precorrin-2 C20-methyltransferase
Authors:Wada, K, Fukuyama, K.
Deposit date:2006-10-10
Release date:2007-01-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of CbiL, a methyltransferase involved in anaerobic vitamin B biosynthesis, and CbiL in complex with S-adenosylhomocysteine--implications for the reaction mechanism.
Febs J., 274, 2007
3OFK
DownloadVisualize
BU of 3ofk by Molmil
Crystal structure of N-methyltransferase NodS from Bradyrhizobium japonicum WM9 in complex with S-adenosyl-l-homocysteine (SAH)
Descriptor: Nodulation protein S, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Cakici, O, Sikorski, M, Stepkowski, T, Bujacz, G, Jaskolski, M.
Deposit date:2010-08-15
Release date:2010-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of NodS N-Methyltransferase from Bradyrhizobium japonicum in Ligand-Free Form and as SAH Complex.
J.Mol.Biol., 404, 2010
4G67
DownloadVisualize
BU of 4g67 by Molmil
Crystal structure of a COG1565 superfamily member and likely methyl transferase from Burkholderia thailandensis bound to S-adenosyl-homocysteine
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-07-18
Release date:2012-08-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
1G55
DownloadVisualize
BU of 1g55 by Molmil
Structure of human DNMT2, an enigmatic DNA methyltransferase homologue
Descriptor: BETA-MERCAPTOETHANOL, DNA CYTOSINE METHYLTRANSFERASE DNMT2, GLYCEROL, ...
Authors:Dong, A, Yoder, J.A, Zhang, X, Zhou, L, Bestor, T.H, Cheng, X.
Deposit date:2000-10-30
Release date:2001-01-17
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA.
Nucleic Acids Res., 29, 2001
4G56
DownloadVisualize
BU of 4g56 by Molmil
Crystal Structure of full length PRMT5/MEP50 complexes from Xenopus laevis
Descriptor: Hsl7 protein, MGC81050 protein, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Ho, M, Wilczek, C, Bonanno, J, Shechter, D, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-07-17
Release date:2012-10-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of the arginine methyltransferase PRMT5-MEP50 reveals a mechanism for substrate specificity
Plos One, 8, 2013
3KXR
DownloadVisualize
BU of 3kxr by Molmil
Structure of the cystathionine beta-synthase pair domain of the putative Mg2+ transporter SO5017 from Shewanella oneidensis MR-1.
Descriptor: CHLORIDE ION, Magnesium transporter, putative
Authors:Fratczak, Z, Zimmerman, M.D, Chruszcz, M, Cymborowski, M, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-12-03
Release date:2009-12-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structure of the cystathionine beta-synthase pair domain of the putative Mg2+ transporter SO5017 from Shewanella oneidensis MR-1.
To be Published
2P1D
DownloadVisualize
BU of 2p1d by Molmil
Crystal structure of dengue methyltransferase in complex with GTP and S-Adenosyl-L-homocysteine
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Egloff, M.P, Benarooch, D, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2007-03-05
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:An RNA cap (nucleoside-2'-O)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization
EMBO J., 21, 2002

238895

건을2025-07-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon