Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ETR
DownloadVisualize
BU of 3etr by Molmil
Crystal structure of xanthine oxidase in complex with lumazine
Descriptor: CALCIUM ION, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Pauff, J.M, Cao, H, Hille, R.
Deposit date:2008-10-08
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate Orientation and Catalysis at the Molybdenum Site in Xanthine Oxidase: CRYSTAL STRUCTURES IN COMPLEX WITH XANTHINE AND LUMAZINE.
J.Biol.Chem., 284, 2009
5DOR
DownloadVisualize
BU of 5dor by Molmil
P2 Integrase catalytic domain in space group P21
Descriptor: Integrase, PHOSPHATE ION, ZINC ION
Authors:Skaar, K, Claesson, M, Odegrip, R, Haggard-Ljungquist, E, Hogbom, M.
Deposit date:2015-09-11
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the bacteriophage P2 integrase catalytic domain.
Febs Lett., 589, 2015
4GPJ
DownloadVisualize
BU of 4gpj by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a isoxazolylbenzimidazole ligand
Descriptor: (1R)-6-(3,5-dimethyl-1,2-oxazol-4-yl)-1-phenyl-2,3-dihydro-1H-inden-1-ol, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
Authors:Filippakopoulos, P, Picaud, S, Qi, J, Felletar, I, Heightman, T.D, Brennan, P, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2012-08-21
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The design and synthesis of 5- and 6-isoxazolylbenzimidazoles as selective inhibitors of the BET bromodomains.
Medchemcomm, 4, 2013
1K4J
DownloadVisualize
BU of 1k4j by Molmil
Crystal Structure of the Acyl-homoserinelactone Synthase EsaI Complexed with Rhenate
Descriptor: PERRHENATE, acyl-homoserinelactone synthase EsaI
Authors:Watson, W.T, Minogue, T.D, Val, D.L, Beck von Bodman, S, Churchill, M.E.A.
Deposit date:2001-10-08
Release date:2002-04-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing.
Mol.Cell, 9, 2002
6YND
DownloadVisualize
BU of 6ynd by Molmil
GAPDH purified from the supernatant of HEK293F cells: crystal form 1 of 4.
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, Glyceraldehyde-3-phosphate dehydrogenase
Authors:Roversi, P, Lia, A.
Deposit date:2020-04-13
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.525 Å)
Cite:Partial catalytic Cys oxidation of human GAPDH to Cys-sulfonic acid.
Wellcome Open Res, 5, 2020
6YOA
DownloadVisualize
BU of 6yoa by Molmil
Lig v 1 structure and the inflammatory response to the Ole e 1 protein family
Descriptor: Major pollen allergen Lig v 1, NICKEL (II) ION
Authors:Robledo-Retana, T, Bradley-Clark, J, Croll, T, Rose, R, Stagg, A, Villalba, M, Pickersgill, R.
Deposit date:2020-04-14
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Lig v 1 structure and the inflammatory response to the Ole e 1 protein family.
Allergy, 75, 2020
4X2B
DownloadVisualize
BU of 4x2b by Molmil
K20A RNA dependent RNA polymerase mutant from Foot-and-Mouth disease Virus complexed with an RNA
Descriptor: MAGNESIUM ION, RNA dependent RNA polymerase, RNA primer, ...
Authors:Verdaguer, N, Ferrer-Orta, C.
Deposit date:2014-11-26
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Multifunctionality of a picornavirus polymerase domain: nuclear localization signal and nucleotide recognition.
J.Virol., 89, 2015
2VK0
DownloadVisualize
BU of 2vk0 by Molmil
Crystal structure form ultalente insulin microcrystals
Descriptor: 4-HYDROXY-BENZOIC ACID METHYL ESTER, INSULIN A CHAIN, INSULIN B CHAIN, ...
Authors:Wagner, A, Diez, J, Schulze-Briese, C, Schluckebier, G.
Deposit date:2007-12-14
Release date:2008-09-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Ultralente--A Microcrystalline Insulin Suspension.
Proteins, 74, 2009
4GQE
DownloadVisualize
BU of 4gqe by Molmil
Structure of rat neuronal nitric oxide synthase heme domain in complex with (5E)-5-[(N-tert-butoxycarbamimidoyl)imino]-L-norvaline
Descriptor: (5E)-5-[(N-tert-butoxycarbamimidoyl)imino]-L-norvaline, 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2012-08-22
Release date:2013-05-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Methylated N(omega)-Hydroxy-l-arginine Analogues as Mechanistic Probes for the Second Step of the Nitric Oxide Synthase-Catalyzed Reaction
Biochemistry, 52, 2013
6YOL
DownloadVisualize
BU of 6yol by Molmil
Meta-Nidocarborane propyl-sulfonamide in complex with CA IX mimic
Descriptor: Carbonic anhydrase 2, Meta-Nidocarborane propyl-sulfonamide, ZINC ION
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-04-14
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Direct Introduction of an Alkylsulfonamido Group on C-sites of Isomeric Dicarba-closo-dodecaboranes: The Influence of Stereochemistry on Inhibitory Activity against the Cancer-Associated Carbonic Anhydrase IX Isoenzyme.
Chemistry, 26, 2020
3EU8
DownloadVisualize
BU of 3eu8 by Molmil
Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-09
Release date:2008-10-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
To be published
2V9U
DownloadVisualize
BU of 2v9u by Molmil
Rim domain of main porin from Mycobacteria smegmatis
Descriptor: MSPA
Authors:Grueninger, D, Ziegler, M.O.P, Koetter, J.W.A, Treiber, N, Schulze, M.-S, Schulz, G.E.
Deposit date:2007-08-27
Release date:2008-01-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Designed Protein-Protein Association.
Science, 319, 2008
4GSY
DownloadVisualize
BU of 4gsy by Molmil
Crystal structure of thymidylate kinase from Staphylococcus aureus bound to inhibitor.
Descriptor: 4-{[(3S)-3-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)piperidin-1-yl]methyl}-2-[3-(trifluoromethyl)phenoxy]benzoic acid, Thymidylate kinase
Authors:Larsen, N.A, Olivier, N.B.
Deposit date:2012-08-28
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Discovery of Selective and Potent Inhibitors of Gram-Positive Bacterial Thymidylate Kinase (TMK).
J.Med.Chem., 55, 2012
5YX9
DownloadVisualize
BU of 5yx9 by Molmil
Cryo-EM structure of human TRPC6 at 3.8A resolution
Descriptor: Short transient receptor potential channel 6
Authors:Chen, L, Tang, Q, Guo, W.
Deposit date:2017-12-02
Release date:2018-05-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the receptor-activated human TRPC6 and TRPC3 ion channels.
Cell Res., 28, 2018
2VEK
DownloadVisualize
BU of 2vek by Molmil
Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties
Descriptor: 3-(BUTYLSULPHONYL)-PROPANOIC ACID, CITRIC ACID, TERTIARY-BUTYL ALCOHOL, ...
Authors:Alahuhta, M, Salin, M, Casteleijn, M.G, Kemmer, C, El-Sayed, I, Augustyns, K, Neubauer, P, Wierenga, R.K.
Deposit date:2007-10-24
Release date:2008-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties.
Protein Eng.Des.Sel., 21, 2008
4YS8
DownloadVisualize
BU of 4ys8 by Molmil
Crystal Structure of 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (IspD) from Burkholderia thailandensis
Descriptor: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, ACETATE ION, GLYCEROL
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-03-16
Release date:2015-04-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (IspD) from Burkholderia thailandensis
to be published
4YMY
DownloadVisualize
BU of 4ymy by Molmil
Crystal structure of mutant nitrobindin M75A/H76L/Q96C/M148L/H158A (NB11) from Arabidopsis thaliana
Descriptor: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Himiyama, T, Tachikawa, K, Oohora, K, Onoda, A, Hayashi, T.
Deposit date:2015-03-08
Release date:2015-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:A Highly Active Biohybrid Catalyst for Olefin Metathesis in Water: Impact of a Hydrophobic Cavity in a beta-Barrel Protein
Acs Catalysis, 5, 2015
4YN4
DownloadVisualize
BU of 4yn4 by Molmil
Structure of human DNA polymerase beta complexed with N7BG in the template opposite to incoming non-hydrolyzable dTTP WITH MANGANESE IN THE ACTIVE SITE
Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA 10-mer (up-primer), DNA 16-mer (template), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-09
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.243 Å)
Cite:Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.
Biochemistry, 2018
3EW3
DownloadVisualize
BU of 3ew3 by Molmil
the 1:2 complex between a Nterminal elongated prolactin and the extra cellular domain of the rat prolactin receptor
Descriptor: Prolactin, Prolactin receptor
Authors:Broutin, I, Jomain, J.B, England, P, Goffin, V.
Deposit date:2008-10-14
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of an affinity-matured prolactin complexed to its dimerized receptor reveals the topology of hormone binding site 2.
J.Biol.Chem., 285, 2010
2V3R
DownloadVisualize
BU of 2v3r by Molmil
Hypocrea jecorina Cel7A in complex with (S)-dihydroxy-phenanthrenolol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{[(2S)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL, COBALT (II) ION, ...
Authors:Fagerstrom, A, Sandgren, M, Berg, U, Stahlberg, J.
Deposit date:2007-06-21
Release date:2008-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Study of the Chiral Recognition Mechanisms of Cellobiohydrolase Cel7A for Ligands Based on the Beta-Blocker Motif: Crystal Structures, Microcalorimetry and Computational Modelling of Cel7A-Inhibitor Complexes.
To be Published
2VFM
DownloadVisualize
BU of 2vfm by Molmil
Low Temperature Structure of P22 Tailspike Protein Fragment (109-666)
Descriptor: BIFUNCTIONAL TAIL PROTEIN, CALCIUM ION, GLYCEROL, ...
Authors:Becker, M, Mueller, J.J, Heinemann, U, Seckler, R.
Deposit date:2007-11-05
Release date:2008-12-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Side-Chain Stacking and Beta-Helix Stability in P22 Tailspike Protein
To be Published
2V5N
DownloadVisualize
BU of 2v5n by Molmil
STRUCTURE OF HUMAN IGF2R DOMAINS 11-12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR
Authors:Brown, J, Delaine, C, Zaccheo, O.J, Siebold, C, Gilbert, R.J, van Boxel, G, Denley, A, Wallace, J.C, Hassan, A.B, Forbes, B.E, Jones, E.Y.
Deposit date:2007-07-06
Release date:2007-12-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Functional Analysis of the Igf-II/Igf2R Interaction
Embo J., 27, 2008
6BU3
DownloadVisualize
BU of 6bu3 by Molmil
CTX-M-27 Beta-Lactamase in Complex with a Non-Covalent Tetrazole Inhibitor
Descriptor: Beta-lactamase, N-[3-(2H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)-1H-benzimidazole-4-carboxamide, SULFATE ION
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2017-12-08
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Antibacterial Spectrum of a Tetrazole-Based Reversible Inhibitor of Serine beta-Lactamases.
Antimicrob. Agents Chemother., 62, 2018
5E6A
DownloadVisualize
BU of 5e6a by Molmil
Glucocorticoid receptor DNA binding domain - PLAU NF-kB response element complex
Descriptor: DNA (5'-D(*AP*TP*CP*AP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*TP*GP*AP*T)-3'), Glucocorticoid receptor, ...
Authors:Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
Deposit date:2015-10-09
Release date:2017-02-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
3EY6
DownloadVisualize
BU of 3ey6 by Molmil
Crystal structure of the FK506-binding domain of human FKBP38
Descriptor: FK506-binding protein 8
Authors:Parthier, C, Maestre-Martinez, M, Neumann, P, Edlich, F, Fischer, G, Luecke, C, Stubbs, M.T.
Deposit date:2008-10-19
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:A charge-sensitive loop in the FKBP38 catalytic domain modulates Bcl-2 binding.
J.Mol.Recognit., 24, 2011

225399

건을2024-09-25부터공개중

PDB statisticsPDBj update infoContact PDBjnumon