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9IK9
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BU of 9ik9 by Molmil
Cryo-EM Structure of SST analogs bond SSTR1-Gi complex
Descriptor: (4J2)(DCY)(DTY)(DTR)K(DVA)(DCY)(ALO)(NH2), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wong, T.S, Zeng, Z.C, Xiong, T.T, Gan, S.Y, Du, Y.
Deposit date:2024-06-26
Release date:2025-04-30
Last modified:2025-07-23
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Structural insights into the binding modes of lanreotide and pasireotide with somatostatin receptor 1.
Acta Pharm Sin B, 15, 2025
5YLN
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BU of 5yln by Molmil
Zinc dependent alcohol dehydrogenase 2 from Streptococcus pneumonia - apo form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alcohol dehydrogenase, zinc-containing, ...
Authors:Donghyuk, S, Seungsu, H, Sangho, L.
Deposit date:2017-10-18
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.189 Å)
Cite:Zinc dependent alcohol dehydrogenase 2 from Streptococcus pneumonia - apo form
To Be Published
8T6F
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BU of 8t6f by Molmil
Crystal structure of human MBP-Myeloid cell leukemia 1 (Mcl-1) in complex with BRD810 inhibitor
Descriptor: (3aM,9S,15R)-4-chloro-3-ethyl-7-{3-[(6-fluoronaphthalen-1-yl)oxy]propyl}-2-methyl-15-[2-(morpholin-4-yl)ethyl]-2,10,11,12,13,15-hexahydropyrazolo[4',3':9,10][1,6]oxazacycloundecino[8,7,6-hi]indole-8-carboxylic acid, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Poncet-Montange, G, Lemke, C.T.
Deposit date:2023-06-15
Release date:2024-06-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:BRD-810 is a highly selective MCL1 inhibitor with optimized in vivo clearance and robust efficacy in solid and hematological tumor models.
Nat Cancer, 5, 2024
7XAO
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BU of 7xao by Molmil
Crystal structure of thioredoxin 1
Descriptor: Thioredoxin
Authors:Chang, Y.J, Park, H.H.
Deposit date:2022-03-18
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-resolution crystal structure of Acinetobacter baumannii thioredoxin 1.
Biochem.Biophys.Res.Commun., 608, 2022
9INP
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BU of 9inp by Molmil
Human Pin1 (Peptidyl-prolyl cis-trans isomerase) catalytic domain in complex with a covalent inhibitor
Descriptor: CITRIC ACID, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ~{N}-[(3~{R})-1,1-bis(oxidanylidene)thiolan-3-yl]-2-chloranyl-~{N}-(2,2-dimethylpropyl)-5-nitro-pyrimidin-4-amine
Authors:Wang, X.Y, Tian, M.Z, Zhou, J, Xu, B.L.
Deposit date:2024-07-08
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Discovery of Novel Pyrimidine Derivatives as Human Pin1 Covalent Inhibitors.
Acs Med.Chem.Lett., 16, 2025
9F2H
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BU of 9f2h by Molmil
Crystal structure of SARS-CoV-2 N-protein C-terminal domain in complex with riluzole
Descriptor: 1,2-ETHANEDIOL, 6-(trifluoromethoxy)-1,3-benzothiazol-2-amine, Nucleoprotein, ...
Authors:Marquez-Monino, M.A, Gonzalez, B, Perez-Canadillas, J.M.
Deposit date:2024-04-23
Release date:2024-11-13
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The ALS drug riluzole binds to the C-terminal domain of SARS-CoV-2 nucleocapsid protein and has antiviral activity.
Structure, 33, 2025
3LXH
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BU of 3lxh by Molmil
Crystal Structure of Cytochrome P450 CYP101D1
Descriptor: 1,4-DIETHYLENE DIOXIDE, Cytochrome P450, PHOSPHATE ION, ...
Authors:Yang, W, Bell, S.G, Wang, H, Bartlam, M, Wong, L.L, Rao, Z.
Deposit date:2010-02-25
Release date:2010-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular characterization of a class I P450 electron transfer system from Novosphingobium aromaticivorans DSM12444
J.Biol.Chem., 285, 2010
4HSG
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BU of 4hsg by Molmil
Crystal structure of human PRMT3 in complex with an allosteric inhibitor (PRMT3- KTD)
Descriptor: 1-(1,2,3-benzothiadiazol-6-yl)-3-(2-oxo-2-phenylethyl)urea, PRMT3 protein, UNKNOWN ATOM OR ION
Authors:Dobrovetsky, E, Dong, A, Liu, F, Li, F, Tempel, W, Siarheyeva, A, Hajian, T, Smil, D, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Schapira, M, Jin, J, Vedadi, M, Structural Genomics Consortium (SGC)
Deposit date:2012-10-30
Release date:2012-12-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Exploiting an allosteric binding site of PRMT3 yields potent and selective inhibitors.
J. Med. Chem., 56, 2013
5YL8
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BU of 5yl8 by Molmil
The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
Descriptor: Peptidyl-tRNA hydrolase, SODIUM ION
Authors:Bairagya, H.R, Sharma, P, Iqbal, N, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-10-17
Release date:2017-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
To Be Published
4HTK
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BU of 4htk by Molmil
Mitigation of X-ray damage in macromolecular crystallography by submicrometer line focusing; total dose 2.17 x 10e+12 X-ray photons
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Duke, N.E.C, Finfrock, Y.Z, Stern, E.A, Alkire, R.W, Lazarski, K, Joachimiak, A.
Deposit date:2012-11-01
Release date:2013-05-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mitigation of X-ray damage in macromolecular crystallography by submicrometre line focusing.
Acta Crystallogr.,Sect.D, 69, 2013
7CI8
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BU of 7ci8 by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
Descriptor: (1S)-1-[1-[(5-phenyl-1,2-oxazol-3-yl)methyl]imidazol-2-yl]ethanol, MAGNESIUM ION, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ...
Authors:Mima, M, Baker, L.M, Surgenor, A, Robertson, A.
Deposit date:2020-07-07
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Fragment-Based Discovery of Novel Non-Hydroxamate LpxC Inhibitors with Antibacterial Activity.
J.Med.Chem., 63, 2020
8XW7
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BU of 8xw7 by Molmil
Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with oxalate and fructose 1,6-bisphosphate and ADP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Nakashima, R, Taguchi, A.
Deposit date:2024-01-16
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of Nucleotide Selectivity in Pyruvate Kinase.
J.Mol.Biol., 436, 2024
7XH0
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BU of 7xh0 by Molmil
crystal structure of Csn-PD from Paenibacillus dendritiformis
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, Chitosanase
Authors:Sun, H.H, Cheng, Y.M, Cao, R, Liu, Q, Zhao, L.
Deposit date:2022-04-07
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:crystal structure of Csn-PD from Paenibacillus dendritiformis
To Be Published
1JV7
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BU of 1jv7 by Molmil
BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Rouhani, S, Cartailler, J.-P, Facciotti, M.T, Walian, P, Needleman, R, Lanyi, J.K, Glaeser, R.M, Luecke, H.
Deposit date:2001-08-28
Release date:2001-10-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate.
J.Mol.Biol., 313, 2001
9I7K
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BU of 9i7k by Molmil
Pseudomonas aeruginosa FabF C164A in complex with N-(3-(2-(1H-pyrrol-1-yl)propanamido)-2-hydroxy-2-methylpropyl)-1H-pyrazole-3-carboxamide
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Yadrykhinsky, V, Brenk, R.
Deposit date:2025-01-31
Release date:2025-04-30
Method:X-RAY DIFFRACTION (1.827 Å)
Cite:Towards new antibiotics: P. aeruginosa FabF ligands discovered by crystallographic fragment screening followed by hit expansion.
Eur.J.Med.Chem., 291, 2025
4Y8D
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BU of 4y8d by Molmil
Crystal structure of Cyclin-G associated kinase (GAK) complexed with selective 12i inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-methoxy-4-[3-(morpholin-4-yl)[1,2]thiazolo[4,3-b]pyridin-6-yl]aniline, Cyclin-G-associated kinase, ...
Authors:Chaikuad, A, Heroven, C, Nowak, R, De Jonghe, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2015-02-16
Release date:2015-04-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Selective Inhibitors of Cyclin G Associated Kinase (GAK) as Anti-Hepatitis C Agents.
J.Med.Chem., 58, 2015
6UK6
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BU of 6uk6 by Molmil
Crystal structure of human GAC in complex with inhibitor UPGL00018
Descriptor: 5-{4-[(5-amino-1,3,4-thiadiazol-2-yl)oxy]piperidin-1-yl}-1,3,4-thiadiazol-2-amine, Glutaminase kidney isoform, mitochondrial
Authors:Huang, Q, Cerione, R.A.
Deposit date:2019-10-04
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of human GAC in complex with inhibitor UPGL00018
To Be Published
8K3J
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BU of 8k3j by Molmil
Structure of human CNTN2 immunoglobulin domains 1-6 homo-dimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-2, ...
Authors:Zhang, Z.Z.
Deposit date:2023-07-16
Release date:2024-07-17
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of human CNTN2 immunoglobulin domains 1-6 homo-dimer
To Be Published
6RFE
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BU of 6rfe by Molmil
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 4
Descriptor: (~{E})-~{N}-(5-bromanyl-1,3,4-thiadiazol-2-yl)-2-cyano-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enamide, 1,2-ETHANEDIOL, Casein kinase II subunit alpha, ...
Authors:Dalle Vedove, A, Zanforlin, E, Ribaudo, G, Zagotto, G, Battistutta, R, Lolli, G.
Deposit date:2019-04-13
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:A novel class of selective CK2 inhibitors targeting its open hinge conformation.
Eur.J.Med.Chem., 195, 2020
4YD4
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BU of 4yd4 by Molmil
Endothiapepsin in complex with fragment 227
Descriptor: 1,2-ETHANEDIOL, 4-(bromomethyl)benzoic acid, BROMIDE ION, ...
Authors:Stieler, M, Heine, A, Klebe, G.
Deposit date:2015-02-20
Release date:2016-03-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
4YEK
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BU of 4yek by Molmil
X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with thymidine
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Balaev, V.V, Lashkov, A.A, Gabdulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2015-02-24
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural investigation of the thymidine phosphorylase from Salmonella typhimurium in the unliganded state and its complexes with thymidine and uridine.
Acta Crystallogr.,Sect.F, 72, 2016
9IK8
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BU of 9ik8 by Molmil
Cryo-EM Structure of SSTR1-Gi SST analogs complex
Descriptor: DTR-LYS-TY5-PHA-A1D5E-004, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wong, T.S, Zeng, Z.C, Xiong, T.T, Gan, S.Y, Du, Y.
Deposit date:2024-06-26
Release date:2025-04-30
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural insights into the binding modes of lanreotide and pasireotide with somatostatin receptor 1.
Acta Pharm Sin B, 15, 2025
5YIG
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BU of 5yig by Molmil
Crystal structure of Streptococcus pneumonia ParE with inhibitor
Descriptor: 1-ethyl-3-[5-[2-[(1S,5R)-3-methyl-3,8-diazabicyclo[3.2.1]octan-8-yl]-5-(2-oxidanylidene-3H-1,3,4-oxadiazol-5-yl)pyridin-3-yl]-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]pyridin-2-yl]urea, DNA topoisomerase 4 subunit B
Authors:Cherian, J, Tan, Y, Hill, J.
Deposit date:2017-10-04
Release date:2018-09-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of dual GyrB/ParE inhibitors active against Gram-negative bacteria.
Eur J Med Chem, 157, 2018
7MLC
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BU of 7mlc by Molmil
PYL10 bound to the ABA pan-antagonist 4a
Descriptor: 1-{2-[3,5-dicyclopropyl-4-(4-{[(quinoxaline-2-carbonyl)amino]methyl}-1H-1,2,3-triazol-1-yl)phenyl]acetamido}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10, GLYCEROL
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
6BQ9
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BU of 6bq9 by Molmil
2.55 Angstrom Resolution Crystal Structure of N-terminal Fragment (residues 1-493) of DNA Topoisomerase IV Subunit A from Pseudomonas putida
Descriptor: CHLORIDE ION, DNA topoisomerase 4 subunit A, SODIUM ION
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Kiryukhina, O, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-27
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:2.55 Angstrom Resolution Crystal Structure of N-terminal Fragment (residues 1-493) of DNA Topoisomerase IV Subunit A from Pseudomonas putida.
To Be Published

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