PDB: 57 件ウェブページステータス検索Chemie searchBIRD

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8F8Z	PHF2 (PHD+JMJ) in Complex with H3 Histone N-Terminal Peptide 分子名称: 1,2-ETHANEDIOL, H3 N-Terminal Peptide, Lysine-specific demethylase PHF2, ... 著者 Horton, J.R, Cheng, X. 登録日 2022-11-22 公開日 2023-01-18 最終更新日 2023-02-08 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 A complete methyl-lysine binding aromatic cage constructed by two domains of PHF2. J.Biol.Chem., 299, 2022
8F8Y	PHF2 (PHD+JMJ) in Complex with VRK1 N-Terminal Peptide 分子名称: 1,2-ETHANEDIOL, Lysine-specific demethylase PHF2, SULFATE ION, ... 著者 Horton, J.R, Cheng, X. 登録日 2022-11-22 公開日 2023-01-18 最終更新日 2023-02-08 実験手法 X-RAY DIFFRACTION (3.06 Å) 主引用文献 A complete methyl-lysine binding aromatic cage constructed by two domains of PHF2. J.Biol.Chem., 299, 2022
7YTA	crystal structure of NtAGDP3 AGD1-2 in complex with an H3K9me2 peptide 分子名称: AGDP3 AGD1-2, H3(1-15)K9me2 peptide 著者 Zhou, X, Du, J. 登録日 2022-08-13 公開日 2022-10-12 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 The H3K9me2-binding protein AGDP3 limits DNA methylation and transcriptional gene silencing in Arabidopsis. J Integr Plant Biol, 64, 2022
7YT9	crystal structure of AGD1-4 of Arabidopsis AGDP3 分子名称: AGD1-4 of Arabidopsis AGDP3 著者 Zhou, X, Du, J. 登録日 2022-08-13 公開日 2022-10-12 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The H3K9me2-binding protein AGDP3 limits DNA methylation and transcriptional gene silencing in Arabidopsis. J Integr Plant Biol, 64, 2022
7XUD	Structure of G9a in complex with compound 26a 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... 著者 Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Umehara, T. 登録日 2022-05-18 公開日 2023-03-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Discovery of Novel Substrate-Competitive Lysine Methyltransferase G9a Inhibitors as Anticancer Agents. J.Med.Chem., 66, 2023
7XUC	Structure of G9a in complex with compound 11a 分子名称: 1,2-ETHANEDIOL, 3,6,6-trimethyl-4-oxidanylidene-~{N}-[(2~{S})-1-oxidanylidene-1-phenylazanyl-hexan-2-yl]-5,7-dihydro-1~{H}-indole-2-carboxamide, CHLORIDE ION, ... 著者 Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Umehara, T. 登録日 2022-05-18 公開日 2023-03-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Discovery of Novel Substrate-Competitive Lysine Methyltransferase G9a Inhibitors as Anticancer Agents. J.Med.Chem., 66, 2023
7XUB	Structure of G9a in complex with compound 10d 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Histone-lysine N-methyltransferase EHMT2, ... 著者 Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Umehara, T. 登録日 2022-05-18 公開日 2023-03-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of Novel Substrate-Competitive Lysine Methyltransferase G9a Inhibitors as Anticancer Agents. J.Med.Chem., 66, 2023
7XUA	Structure of G9a in complex with compound 10a 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Histone-lysine N-methyltransferase EHMT2, ... 著者 Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Umehara, T. 登録日 2022-05-18 公開日 2023-03-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Discovery of Novel Substrate-Competitive Lysine Methyltransferase G9a Inhibitors as Anticancer Agents. J.Med.Chem., 66, 2023
7XPK	crystal structure of rice ASI1 BAH domain in complex with a rice SUVH6 peptide 分子名称: Alpha-aminoacylpeptide hydrolase, BAH domain-containing protein 著者 Yuan, J, Du, J. 登録日 2022-05-04 公開日 2023-01-11 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants. Proc.Natl.Acad.Sci.USA, 120, 2023
7XPJ	crystal structure of rice ASI1 BAH domain 分子名称: BAH domain-containing protein 著者 Yuan, J, Du, J. 登録日 2022-05-04 公開日 2023-01-11 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.301 Å) 主引用文献 Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants. Proc.Natl.Acad.Sci.USA, 120, 2023
7VZ2	Crystal structure of chromodomain of Arabidopsis LHP1 分子名称: Chromo domain-containing protein LHP1, UNKNOWN ATOM OR ION 著者 Liu, Y, Min, J. 登録日 2021-11-15 公開日 2022-02-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain. J.Biol.Chem., 298, 2022
7VYW	Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide 分子名称: Chromo domain-containing protein LHP1, SULFATE ION, methylated histone H3K9 peptide 著者 Liu, Y, Zhang, M, Min, J. 登録日 2021-11-15 公開日 2022-02-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain. J.Biol.Chem., 298, 2022
7UVE	Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac 分子名称: Histone-lysine N-methyltransferase eggless, peptide H3K9me2K14ac 著者 Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2022-05-01 公開日 2022-08-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac To Be Published
7UBU	Crystal structure of ZMET2 in complex with hemimethylated CAG DNA and a histone H3Kc9me2 peptide 分子名称: 5MC SSDNA, C49 SSDNA, DNA (cytosine-5)-methyltransferase 1, ... 著者 Fang, J, Song, J. 登録日 2022-03-15 公開日 2022-06-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Mechanistic basis for maintenance of CHG DNA methylation in plants. Nat Commun, 13, 2022
7EF3	crystal structure of maize SHH2 SAWADEE domain in complex with H3K9me2 peptide 分子名称: HB transcription factor, Histone H3.2, ZINC ION 著者 Wang, Y, Du, J. 登録日 2021-03-20 公開日 2021-06-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2. J Integr Plant Biol, 63, 2021
6Z2A	Structure of Clr4 mutant - F256A/F310A/F427A bound to SAH 分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific, MAGNESIUM ION, ... 著者 Stirpe, A, Schalch, T. 登録日 2020-05-15 公開日 2021-05-26 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.456 Å) 主引用文献 SUV39 SET domains mediate crosstalk of heterochromatic histone marks. Elife, 10, 2021
6IE7	Crystal structure of ADCP1 tandem Agenet domain 1-2 in complex with H3K9me2 分子名称: AMMONIUM ION, Agenet domain-containing protein, H3K9me2 peptide 著者 Zhao, S, Zhang, B, Li, H. 登録日 2018-09-13 公開日 2019-01-16 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 ADCP1-tandem Agenet domain 1-2 in complex wit h H3K9me2 Cell Res., 29, 2019
6IE6	Crystal structure of ADCP1 tandem Agenet domain 3-4 in complex with H3K9me2 分子名称: Agenet domain-containing protein, H3K9me2 著者 Zhao, S, Zhang, B, Li, H. 登録日 2018-09-13 公開日 2019-01-16 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 ADCP1-tandem Agenet domain 1-2 in complex wit h H3K9me2 Cell Res., 29, 2019
6IE5	Crystal structure of ADCP1 tandem Agenet domain 3-4 分子名称: Agenet domain-containing protein 著者 Zhao, S, Zhang, B, Li, H. 登録日 2018-09-13 公開日 2019-01-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.298 Å) 主引用文献 ADCP1-tandem Agenet domain 1-2 in complex wit h H3K9me2 Cell Res., 29, 2019
6IE4	Crystal structure of ADCP1 tandem Agenet domain 1-2 in complex with H3K9me1 分子名称: Agenet domain-containing protein, H3K9me1 peptide 著者 Zhao, S, Zhang, B, Li, H. 登録日 2018-09-13 公開日 2019-01-16 実験手法 X-RAY DIFFRACTION (2.696 Å) 主引用文献 ADCP1-tandem Agenet domain 1-2 in complex wit h H3K9me2 Cell Res., 29, 2019
6A5N	Crystal structure of Arabidopsis thaliana SUVH6 in complex with methylated DNA 分子名称: DNA (5'-D(*CP*AP*CP*TP*GP*CP*TP*GP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*CP*TP*(5CM)P*AP*GP*CP*AP*GP*T)-3'), Histone-lysine N-methyltransferase, ... 著者 Li, X, Du, J. 登録日 2018-06-24 公開日 2018-08-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6A5M	Crystal structure of Arabidopsis thaliana SUVH6 in complex with SAM, form 2 分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, S-ADENOSYLMETHIONINE, ... 著者 Li, X, Du, J. 登録日 2018-06-24 公開日 2018-08-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.301 Å) 主引用文献 Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6A5K	Crystal structure of Arabidopsis thaliana SUVH6 in complex with SAM, form 1 分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, S-ADENOSYLMETHIONINE, ... 著者 Li, X, Du, J. 登録日 2018-06-24 公開日 2018-08-29 最終更新日 2018-09-26 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5ZWZ	Crystal structure of Arabidopsis thaliana AGDP1 AGD34 分子名称: Agenet domain-containing protein 著者 Du, X, Du, J. 登録日 2018-05-17 公開日 2018-11-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin Nat Commun, 9, 2018
5ZWX	Crystal structure of Raphanus sativus AGDP1 AGD12 in complex with an H3K9me2 peptide 分子名称: DUF724 domain-containing protein 6-like, H3(1-15)K9me2 peptide 著者 Du, X, Du, J. 登録日 2018-05-17 公開日 2018-11-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin Nat Commun, 9, 2018

 

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