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5TXW
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Structure of Pfp1 protease from Thermococcus thioreducens: large cell H3 crystal form
分子名称: Peptidase
著者Larson, S.B, McPherson, A.
登録日2016-11-17
公開日2017-09-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The structure of the Pfp1 protease from the hyperthermophilic archaeon Thermococcus thioreducens in two crystal forms.
Acta Crystallogr D Struct Biol, 73, 2017
6H5D
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BU of 6h5d by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 2
分子名称: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
著者Sanz-Gaitero, M, Maneiro, M, Lence, E, Otero, J.M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
登録日2018-07-24
公開日2019-07-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 9, 2019
7RCQ
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Crystal structure of triosephosphate isomerase from Ktedonobacter racemifer
分子名称: NITRATE ION, Triosephosphate isomerase
著者Vickers, C.J, Patrick, W.M, Fraga, D.
登録日2021-07-07
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Triosephosphate isomerase from Ktedonobacter racemifer
To Be Published
8R3B
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Cocrystal form I of the Pent - sulfonato-calix[8]arene complex
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Beta propeller, sulfonato-calix[8]arene
著者Flood, R.J, Crowley, P.B.
登録日2023-11-08
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Multivalent Calixarene Complexation of a Designed Pentameric Lectin.
Biomacromolecules, 25, 2024
7M5I
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Endolysin from Escherichia coli O157:H7 phage FAHEc1
分子名称: Endolysin, PHOSPHATE ION
著者Love, M.J, Coombes, D, Billington, C, Dobson, R.C.J.
登録日2021-03-24
公開日2021-08-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献The Molecular Basis for Escherichia coli O157:H7 Phage FAHEc1 Endolysin Function and Protein Engineering to Increase Thermal Stability.
Viruses, 13, 2021
7RH0
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BU of 7rh0 by Molmil
Crystal structure of human galectin-3 CRD in complex with Methyl 2-O-(2-nitro-4-trifluoromethyl-benzoyl)-3-O-toluoyl-b-D-talopyranoside
分子名称: CHLORIDE ION, Galectin-3, methyl 3-O-(4-methylbenzoyl)-2-O-[2-nitro-4-(trifluoromethyl)benzoyl]-beta-D-talopyranoside
著者Collins, P.M, Kishor, C, Blanchard, H.
登録日2021-07-16
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.487 Å)
主引用文献Novel Selective Galectin-3 Antagonists Are Cytotoxic to Acute Lymphoblastic Leukemia.
J.Med.Chem., 65, 2022
5TY2
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Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R) in complex with nafcillin
分子名称: (2R,4S)-2-[(1R)-1-{[(2-ethoxynaphthalen-1-yl)carbonyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, Penicillin-binding protein 4, ...
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2016-11-18
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and kinetic analysis of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 2018
6DD8
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Structure of mouse SYCP3, P21 form
分子名称: Synaptonemal complex protein 3
著者Rosenberg, S.C, Munoz, I.C, Uson, I, Corbett, K.D.
登録日2018-05-09
公開日2018-08-01
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A conserved filamentous assembly underlies the structure of the meiotic chromosome axis.
Elife, 8, 2019
5HY2
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Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes
分子名称: Ring-opening amidohydrolase
著者Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C.
登録日2016-02-01
公開日2017-02-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes.
Appl. Environ. Microbiol., 83, 2017
7MDS
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Crystal structure of AtDHDPS1 in complex with MBDTA-2
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic, CHLORIDE ION, ...
著者Hall, C.J, Soares da Costa, T.P, Panjikar, S.
登録日2021-04-06
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants.
Elife, 10, 2021
5TYI
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Grb7 SH2 with bicyclic peptide containing pY mimetic
分子名称: Growth factor receptor-bound protein 7, Peptide inhibitor
著者Watson, G.M, Wilce, M.C.J, Wilce, J.A.
登録日2016-11-20
公開日2017-11-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery, Development, and Cellular Delivery of Potent and Selective Bicyclic Peptide Inhibitors of Grb7 Cancer Target.
J. Med. Chem., 60, 2017
8PM8
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BU of 8pm8 by Molmil
V30M Transthyretin structure in complex with Tolcalpone
分子名称: Tolcapone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2023-06-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献PITB: A high affinity transthyretin aggregation inhibitor with optimal pharmacokinetic properties.
Eur.J.Med.Chem., 261, 2023
8PO6
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Structure of Escherichia coli HrpA apo form
分子名称: ATP-dependent RNA helicase HrpA, PHOSPHATE ION
著者Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G.
登録日2023-07-03
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition.
Nucleic Acids Res., 52, 2024
6IGP
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Crystal structure of S9 peptidase (inactive state)from Deinococcus radiodurans R1 in P212121
分子名称: Acyl-peptide hydrolase, putative, GLYCEROL
著者Yadav, P, Goyal, V.D, Kumar, A, Makde, R.D.
登録日2018-09-25
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
7R1G
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BU of 7r1g by Molmil
Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-38 (R207C, D210S, S211V)
分子名称: Beta-aspartyl-peptidase, Isoaspartyl peptidase, SODIUM ION
著者Loch, J.I, Kadziolka, K, Jaskolski, M.
登録日2022-02-02
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
8PM9
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Crystal structure of human wild type transthyretin in complex with PITB (Pharmacokinetically Improved TTR Binder)
分子名称: (3-fluoranyl-5-oxidanyl-phenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2023-06-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献PITB: A high affinity transthyretin aggregation inhibitor with optimal pharmacokinetic properties.
Eur.J.Med.Chem., 261, 2023
6IJE
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BU of 6ije by Molmil
Crystal structure of the type VI amidase immunity (Tai4) from Agrobacterium tumefaciens
分子名称: 1,2-ETHANEDIOL, Tai4
著者Fukuhara, S, Nakane, T, Yamashita, K, Ishii, R, Ishitani, R, Nureki, O.
登録日2018-10-09
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex.
Acta Crystallogr F Struct Biol Commun, 74, 2018
8PZ8
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BU of 8pz8 by Molmil
crystal structure of VDR in complex with D-Bishomo-1a,25-dihydroxyvitamin D3 Analog 54
分子名称: (1~{R},3~{R})-5-[(2~{E})-2-[(4~{a}~{R},5~{S},9~{a}~{S})-4~{a}-methyl-5-[(2~{R})-6-methyl-6-oxidanyl-heptan-2-yl]-3,4,5,6,7,8,9,9~{a}-octahydro-2~{H}-benzo[7]annulen-1-ylidene]ethylidene]cyclohexane-1,3-diol, Nuclear receptor coactivator 2, Vitamin D3 receptor A
著者Rochel, N.
登録日2023-07-27
公開日2024-04-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Design, synthesis, and biological activity of D-bishomo-1 alpha ,25-dihydroxyvitamin D 3 analogs and their crystal structures with the vitamin D nuclear receptor.
Eur.J.Med.Chem., 271, 2024
6GJD
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BU of 6gjd by Molmil
Erk2 signalling protein
分子名称: DIMETHYL SULFOXIDE, GLYCEROL, Mitogen-activated protein kinase 1, ...
著者O'Reilly, M.
登録日2018-05-16
公開日2019-01-02
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Quantitation of ERK1/2 inhibitor cellular target occupancies with a reversible slow off-rate probe.
Chem Sci, 9, 2018
5TZJ
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Crystal structure of S. aureus TarS 1-349 in complex with UDP-GlcNAc
分子名称: Glycosyl transferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Worrall, L.J, Sobhanifar, S, King, D.T, Strynadka, N.C.
登録日2016-11-21
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Mechanism of Staphylococcus aureus TarS, the Wall Teichoic Acid beta-glycosyltransferase Involved in Methicillin Resistance.
PLoS Pathog., 12, 2016
6GJN
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Cyclophilin A complexed with tri-vector ligand 15.
分子名称: 1-[(4-aminophenyl)methyl]-3-[2-[(2~{R})-2-(2-bromophenyl)pyrrolidin-1-yl]-2-oxidanylidene-ethyl]-1-[(2-methyl-1,2,3,4-tetrazol-5-yl)methyl]urea, FORMIC ACID, GLYCEROL, ...
著者Georgiou, C, De Simone, A, Walkinshaw, M.D, Michel, J.
登録日2018-05-16
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors.
Chem Sci, 10, 2019
6DOR
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BU of 6dor by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 300 mM K+ for 120 s at 21 C (dataset 1)
分子名称: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of cleaved RNA (5'-R(*AP*CP*AP*UP*CP*G)-3'), ...
著者Samara, N.L, Yang, W.
登録日2018-06-09
公開日2018-08-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018
8PO7
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Structure of Escherichia coli HrpA in complex with ADP and dinucleotide dCdC
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*C)-3'), ...
著者Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G.
登録日2023-07-03
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition.
Nucleic Acids Res., 52, 2024
6DF2
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Improved anti-phosphotyrosine antibody 4G10-S5-4D5 Fab complexed with phosphotyrosine peptide
分子名称: Anti-phosphotyrosine antibody c310-4D5 heavy chain, Anti-phosphotyrosine antibody c310-4D5 light chain, LEU-PTR-LEU
著者Mou, K, Leung, K, Wells, J.A.
登録日2018-05-13
公開日2018-11-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Engineering Improved Antiphosphotyrosine Antibodies Based on an Immunoconvergent Binding Motif.
J. Am. Chem. Soc., 140, 2018
7LVW
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Structure of RSV F in Complex with VHH Cl184
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, F-VHH-Cl184, ...
著者Hsieh, C.-L, McLellan, J.S.
登録日2021-02-26
公開日2021-03-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A vulnerable, membrane-proximal site in human respiratory syncytial virus F revealed by a prefusion-specific single-domain antibody.
J.Virol., 95, 2021

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件を2024-08-28に公開中

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