Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5U1U
DownloadVisualize
BU of 5u1u by Molmil
Crystal structure of the ATP-gated P2X7 ion channel bound to allosteric antagonist A740003
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-{(1R)-1-[N''-cyano-N'-(quinolin-5-yl)carbamimidamido]-2,2-dimethylpropyl}-2-(3,4-dimethoxyphenyl)acetamide, P2X purinoceptor
著者Karasawa, A, Kawate, T.
登録日2016-11-29
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.604 Å)
主引用文献Structural basis for subtype-specific inhibition of the P2X7 receptor.
Elife, 5, 2016
6FSW
DownloadVisualize
BU of 6fsw by Molmil
Structure of Archaeoglobus fulgidus SBDS protein at 1.9 Angstrom
分子名称: DI(HYDROXYETHYL)ETHER, Ribosome maturation protein SDO1-like protein
著者Mazzorana, M, Foadi, J, Siliqi, D, Sanchez-Puig, N.
登録日2018-02-20
公開日2018-03-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational flexibility of proteins involved in ribosome biogenesis: investigations via Small Angle X-ray Scattering (SAXS)
Crystals, 8, 2018
5U1Y
DownloadVisualize
BU of 5u1y by Molmil
Crystal structure of the ATP-gated P2X7 ion channel bound to allosteric antagonist GW791343
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N~2~-(3,4-difluorophenyl)-N-{2-methyl-5-[(piperazin-1-yl)methyl]phenyl}glycinamide, P2X purinoceptor
著者Karasawa, A, Kawate, T.
登録日2016-11-29
公開日2017-01-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for subtype-specific inhibition of the P2X7 receptor.
Elife, 5, 2016
7ZG2
DownloadVisualize
BU of 7zg2 by Molmil
BRD4 in complex with Acetyl-Lys
分子名称: (2S)-2,6-diacetamido-N-methyl-hexanamide, Bromodomain-containing protein 4, GLYCEROL
著者Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
登録日2022-04-01
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
6ZR5
DownloadVisualize
BU of 6zr5 by Molmil
Crystal structure of JNK1 in complex with ATF2(19-58)
分子名称: Cyclic AMP-dependent transcription factor ATF-2, MAGNESIUM ION, Mitogen-activated protein kinase 8, ...
著者Kirsch, K, Zeke, A, Remenyi, A.
登録日2020-07-10
公開日2020-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.699 Å)
主引用文献Co-regulation of the transcription controlling ATF2 phosphoswitch by JNK and p38.
Nat Commun, 11, 2020
6FTC
DownloadVisualize
BU of 6ftc by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with HEPES
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Silvestri, I, Fata, F, MIele, A.E, Boumis, G, Williams, D.L, Angelucci, F.
登録日2018-02-21
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-Based Discovery of a Regulatory Site in Thioredoxin Glutathione Reductase Acting as "Doorstop" for NADPH Entry.
ACS Chem. Biol., 13, 2018
7ZV5
DownloadVisualize
BU of 7zv5 by Molmil
Crystal structure of SARS Cov-2 main protease in complex with an inhibitor 4
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, inhibitor TRIP5
著者Rahimova, R, Di Micco, S, Marquez, J.A.
登録日2022-05-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Rational design of the zonulin inhibitor AT1001 derivatives as potential anti SARS-CoV-2.
Eur.J.Med.Chem., 244, 2022
5U3G
DownloadVisualize
BU of 5u3g by Molmil
Structure of the Dickeya dadantii ykkC riboswitch bound to guanidinium
分子名称: GUANIDINE, MAGNESIUM ION, POTASSIUM ION, ...
著者Battaglia, R.A, Price, I.R, Ke, A.
登録日2016-12-02
公開日2017-02-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for guanidine sensing by the ykkC family of riboswitches.
RNA, 23, 2017
6ZS2
DownloadVisualize
BU of 6zs2 by Molmil
Crystal Structure of the bromodomain of human transcription activator BRG1 (SMARCA4) in complex with 2-(6-amino-5-(piperazin-1-yl)pyridazin-3-yl)phenol
分子名称: 1,2-ETHANEDIOL, 2-(6-azanyl-5-piperazin-4-ium-1-yl-pyridazin-3-yl)phenol, Transcription activator BRG1
著者Preuss, F, Joerger, A.C, Kraemer, A, Wanior, M, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-07-15
公開日2020-10-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
J.Med.Chem., 63, 2020
6FWI
DownloadVisualize
BU of 6fwi by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with alpha-Glc-1,3-(1,2-anhydro-carba-mannosamine)
分子名称: (1~{R},2~{R},3~{R},4~{R},6~{R})-4-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3-diol, ACETATE ION, Glycosyl hydrolase family 71, ...
著者Sobala, L.F, Speciale, G, Hakki, Z, Fernandes, P.Z, Raich, L, Rojas-Cervellera, V, Bennet, A, Thompson, A.J, Bernardo-Seisdedos, G, Millet, O, Zhu, S, Lu, D, Sollogoub, M, Rovira, C, Jimenez-Barbero, J, Davies, G.J, Williams, S.J.
登録日2018-03-06
公開日2019-09-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献An Epoxide Intermediate in Glycosidase Catalysis.
Acs Cent.Sci., 6, 2020
6REL
DownloadVisualize
BU of 6rel by Molmil
Crystal structure of Pizza6-SH with CdCl2 nanocrystal
分子名称: CADMIUM ION, CHLORIDE ION, Pizza6-SH
著者Noguchi, H, Clarke, D.E, Gryspeerdt, J.L, Feyter, S.D, Voet, A.R.D.
登録日2019-04-12
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Artificial beta-Propeller Protein-based Hydrolases
To Be Published
6IO4
DownloadVisualize
BU of 6io4 by Molmil
Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A
分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, SILVER ION
著者Wang, H, Sun, H, Wang, M.
登録日2018-10-29
公開日2019-07-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Antimicrobial silver targets glyceraldehyde-3-phosphate dehydrogenase in glycolysis ofE. coli.
Chem Sci, 10, 2019
7ZVJ
DownloadVisualize
BU of 7zvj by Molmil
Homodimeric structure of LARGE1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Diskin, R, Katz, M.
登録日2022-05-16
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural basis for matriglycan synthesis by the LARGE1 dual glycosyltransferase.
Plos One, 17, 2022
6CC7
DownloadVisualize
BU of 6cc7 by Molmil
Structure of Fungal GH62 from Thielavia terretris
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glycoside hydrolase family 62 protein, ...
著者Camargo, S, Mulinari, E.J, Almeida, L.R, Muniz, J.R.C.
登録日2018-02-06
公開日2019-02-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structure of Fungal GH62 from Thielavia terretris
To Be Published
7MOT
DownloadVisualize
BU of 7mot by Molmil
Structure of HDAC2 in complex with an inhibitor (compound 9)
分子名称: 5-{(1S)-7,7-dihydroxy-1-[(1-methylazetidine-3-carbonyl)amino]nonyl}-2-phenyl-1H-imidazole-4-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2021-05-03
公開日2021-07-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Discovery of macrocyclic HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 47, 2021
8R7A
DownloadVisualize
BU of 8r7a by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein PWL2 with the HMA domain of OsHIPP43 from rice (Oryza sativa)
分子名称: Os01g0507700 protein, Pwl2 protein
著者Zdrzalek, R, Banfield, M.J.
登録日2023-11-24
公開日2024-01-31
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.
Proc.Natl.Acad.Sci.USA, 121, 2024
6FU4
DownloadVisualize
BU of 6fu4 by Molmil
Ligand binding domain (LBD) of the p. aeruginosa histamine receptor TlpQ
分子名称: ACETATE ION, GLYCEROL, HISTAMINE, ...
著者Gavira, J.A, Krell, T, Conejero-Muriel, M, Corral-Lugo, A, Matilla, M.A, Silva Jimenez, H, Mesa Torres, N, Martin-Mora, D.
登録日2018-02-26
公開日2018-05-16
最終更新日2018-11-28
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献High-Affinity Chemotaxis to Histamine Mediated by the TlpQ Chemoreceptor of the Human Pathogen Pseudomonas aeruginosa.
MBio, 9, 2018
7QZO
DownloadVisualize
BU of 7qzo by Molmil
Crystal structure of GacS D1 domain
分子名称: CADMIUM ION, GLYCEROL, Histidine kinase
著者Fadel, F, Bassim, V, Botzanowski, T, Francis, V.I, Legrand, P, Porter, S.L, Bourne, Y, Cianferani, S, Vincent, F.
登録日2022-01-31
公開日2022-07-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Insights into the atypical autokinase activity of the Pseudomonas aeruginosa GacS histidine kinase and its interaction with RetS.
Structure, 30, 2022
7MOS
DownloadVisualize
BU of 7mos by Molmil
Structure of HDAC2 in complex with a macrocyclic inhibitor (compound 4)
分子名称: (3S,18S,20aR)-18-(6,6-dihydroxyoctyl)-1,5,6,7,8,18,19,20a-octahydro-4H-14,17-epiminoazeto[1,2-g][1,7,10,13]benzoxatriazacycloheptadecin-20(2H)-one, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2021-05-03
公開日2021-07-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.704 Å)
主引用文献Discovery of macrocyclic HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 47, 2021
5U6B
DownloadVisualize
BU of 5u6b by Molmil
Structure of the Axl kinase domain in complex with a macrocyclic inhibitor
分子名称: (10R)-7-amino-11-chloro-12-fluoro-1-(2-hydroxyethyl)-3,10,16-trimethyl-16,17-dihydro-1H-8,4-(azeno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecin-15(10H)-one, Tyrosine-protein kinase receptor UFO
著者Gajiwala, K.S, Grodsky, N.
登録日2016-12-07
公開日2017-07-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献The Axl kinase domain in complex with a macrocyclic inhibitor offers first structural insights into an active TAM receptor kinase.
J. Biol. Chem., 292, 2017
6ZUK
DownloadVisualize
BU of 6zuk by Molmil
Crystal structure of dimethylated RSL-N23H/G68H (RSL-B6) in complex with cucurbit[7]uril and zinc
分子名称: Fucose-binding lectin protein, GLYCEROL, SODIUM ION, ...
著者Guagnini, F, Engilberge, S, Flood, R.J, Ramberg, K.O, Crowley, P.B.
登録日2020-07-23
公開日2020-11-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Metal-Mediated Protein-Cucurbituril Crystalline Architectures
Cryst.Growth Des., 2020
6R36
DownloadVisualize
BU of 6r36 by Molmil
T. brucei farnesyl pyrophosphate synthase (FPPS)
分子名称: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, Farnesyl pyrophosphate synthase
著者Muenzker, L, Petrick, J.K, Schleberger, C, Jahnke, W.
登録日2019-03-19
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Fragment-Based Discovery of Non-bisphosphonate Binders of Trypanosoma brucei Farnesyl Pyrophosphate Synthase.
Chembiochem, 21, 2020
6CCD
DownloadVisualize
BU of 6ccd by Molmil
The crystal structure of Mycobacterium tuberculosis Rv1747 FHA-1
分子名称: ABC transporter ATP-binding/permease protein Rv1747, SULFATE ION
著者Gay, L.M, Gee, C.L, Alber, T.
登録日2018-02-06
公開日2018-06-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biophysical Characterization of the Tandem FHA Domain Regulatory Module from the Mycobacterium tuberculosis ABC Transporter Rv1747.
Structure, 26, 2018
5HZ4
DownloadVisualize
BU of 5hz4 by Molmil
The structural and biochemical characterization of acyl-coa hydrolase mutant Thr60Ala from Staphylococcus aureus.
分子名称: Thioesterase
著者Khandokar, Y.B, Srivastava, P, Forwood, J.K.
登録日2016-02-02
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structural and biochemical characterization of acyl-coa hydrolase mutant Thr60Ala from Staphylococcus aureus.
To Be Published
7MOX
DownloadVisualize
BU of 7mox by Molmil
Structure of HDAC2 in complex with an inhibitor (compound 14)
分子名称: (1S)-N-[(1S)-7,7-dihydroxy-1-{4-[(1R,4S)-1,2,3,4-tetrahydro-1,4-methanonaphthalen-6-yl]-1H-imidazol-2-yl}nonyl]-6-methyl-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2021-05-03
公開日2021-07-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of macrocyclic HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 47, 2021

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon