Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8QX2
DownloadVisualize
BU of 8qx2 by Molmil
Aplysia californica acetylcholine-binding protein in complex with racemic spiroimine (+)/(-)-4
分子名称: ISOPROPYL ALCOHOL, Soluble acetylcholine receptor, Spiroimine (+)-4 R
著者Sulzenbacher, G, Bourne, Y, Marchot, P.
登録日2023-10-20
公開日2024-04-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Cyclic Imine Core Common to the Marine Macrocyclic Toxins Is Sufficient to Dictate Nicotinic Acetylcholine Receptor Antagonism.
Mar Drugs, 22, 2024
6HB1
DownloadVisualize
BU of 6hb1 by Molmil
Structure of Hgh1, crystal form I
分子名称: CHLORIDE ION, Protein HGH1
著者Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A.
登録日2018-08-09
公開日2019-02-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2.
Mol.Cell, 74, 2019
7JUF
DownloadVisualize
BU of 7juf by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with Man-alpha1-2Man
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Macrophage mannose receptor 1, ...
著者Weis, W.I, Feinberg, H.
登録日2020-08-19
公開日2021-02-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
8B5K
DownloadVisualize
BU of 8b5k by Molmil
Structure of haloalkane dehalogenase DmmarA from Mycobacterium marinum at pH 6.5
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, ...
著者Snajdarova, K, Marek, M.
登録日2022-09-23
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum.
Acta Crystallogr D Struct Biol, 79, 2023
6Z72
DownloadVisualize
BU of 6z72 by Molmil
SARS-CoV-2 Macrodomain in complex with ADP-HPM
分子名称: 1,2-ETHANEDIOL, Adenosine Diphosphate (Hydroxymethyl)pyrrolidine monoalcohol, D-MALATE, ...
著者Zorzini, V, Rack, J, Ahel, I.
登録日2020-05-29
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Viral macrodomains: a structural and evolutionary assessment of the pharmacological potential.
Open Biology, 10, 2020
7RBG
DownloadVisualize
BU of 7rbg by Molmil
Human DNA polymerase beta crosslinked ternary complex 1
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, CALCIUM ION, ...
著者Reed, A.J, Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
6HBY
DownloadVisualize
BU of 6hby by Molmil
HLA class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope
分子名称: 1,2-ETHANEDIOL, ARRPPLAELAALNLSGSRL 5T4 tumour epitope, HLA class II histocompatibility antigen, ...
著者MacLachlan, B, Rizkallah, P.J, Sewell, A.K, Cole, D.K, Godkin, A.J.
登録日2018-08-13
公開日2019-08-14
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Human leukocyte antigen (HLA) class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope.
J.Biol.Chem., 294, 2019
8BMZ
DownloadVisualize
BU of 8bmz by Molmil
Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin
分子名称: Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
5U11
DownloadVisualize
BU of 5u11 by Molmil
E. coli dihydropteroate synthase complexed with an 8-mercaptoguanine derivative: 2-[(2-amino-6-oxo-6,9-dihydro-1H-purin-8-yl)sulfanyl]-N-methylacetamide
分子名称: 2-[(2-amino-6-oxo-6,9-dihydro-1H-purin-8-yl)sulfanyl]-N-methylacetamide, Dihydropteroate synthase
著者Dennis, M.L, Peat, T.S, Swarbrick, J.D.
登録日2016-11-27
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.994 Å)
主引用文献8-Mercaptoguanine Derivatives as Inhibitors of Dihydropteroate Synthase.
Chemistry, 24, 2018
6CAF
DownloadVisualize
BU of 6caf by Molmil
High Resolution Structure of Concanavalin B from Jack Bean (Canavalia ensiformis), A Chitinase-like Protein
分子名称: Concanavalin B
著者McPherson, A.
登録日2018-01-30
公開日2018-03-28
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High Resolution Structure of Concanavalin B from Jack Bean (Canavalia ensiformis), a Chitinase-like Protein
To be published
7RBK
DownloadVisualize
BU of 7rbk by Molmil
Human DNA polymerase beta crosslinked complex, 40 s Ca to Mg exchange
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RHV
DownloadVisualize
BU of 7rhv by Molmil
Aspergillus fumigatus Enolase
分子名称: Enolase, MAGNESIUM ION
著者Nguyen, S, Bruning, J.B.
登録日2021-07-19
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural model of the human plasminogen and Aspergillus fumigatus enolase complex.
Proteins, 90, 2022
6HCI
DownloadVisualize
BU of 6hci by Molmil
Crystal structure of titin M3 domain
分子名称: SULFATE ION, Titin
著者Chatziefthimiou, S.D, Ugurlar, D, Wilmanns, M.
登録日2018-08-15
公開日2019-08-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural diversity in the atomic resolution 3D fingerprint of the titin M-band segment.
Plos One, 14, 2019
8B5O
DownloadVisualize
BU of 8b5o by Molmil
Structure of haloalkane dehalogenase DmmarA from Mycobacterium marinum at pH 5.5
分子名称: ACETATE ION, FORMIC ACID, GLYCEROL, ...
著者Snajdarova, K, Marek, M.
登録日2022-09-23
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum.
Acta Crystallogr D Struct Biol, 79, 2023
6Q4D
DownloadVisualize
BU of 6q4d by Molmil
CDK2 in complex with FragLite31
分子名称: 2-(4-bromanyl-2-methoxy-phenyl)ethanoic acid, Cyclin-dependent kinase 2
著者Wood, D.J, Martin, M.P, Noble, M.E.M.
登録日2018-12-05
公開日2019-03-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
6YVH
DownloadVisualize
BU of 6yvh by Molmil
CWC22-CWC27-EIF4A3 Complex
分子名称: Eukaryotic initiation factor 4A-III, Pre-mRNA-splicing factor CWC22 homolog, Spliceosome-associated protein CWC27 homolog
著者Basquin, J, Busetto, V, LeHir, H, Conti, E.
登録日2020-04-28
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Structural and functional insights into CWC27/CWC22 heterodimer linking the exon junction complex to spliceosomes.
Nucleic Acids Res., 48, 2020
7JVL
DownloadVisualize
BU of 7jvl by Molmil
Structure of the M101A variant of the SidA ornithine hydroxylase complexed with NADP and the FAD in the "out" conformation
分子名称: ACETATE ION, CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Tanner, J.J, Campbell, A.C.
登録日2020-08-21
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Determinants of Flavin Dynamics in a Class B Monooxygenase.
Biochemistry, 59, 2020
5U3Q
DownloadVisualize
BU of 5u3q by Molmil
Human PPARdelta ligand-binding domain in complexed with specific agonist 1
分子名称: 6-(2-{[([1,1'-biphenyl]-4-carbonyl)(propan-2-yl)amino]methyl}phenoxy)hexanoic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Wu, C.-C, Baiga, T.J, Downes, M, La Clair, J.J, Atkins, A.R, Richard, S.B, Stockley-Noel, T.A, Bowman, M.E, Evans, R.M, Noel, J.P.
登録日2016-12-03
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6Z86
DownloadVisualize
BU of 6z86 by Molmil
human GTP cyclohydrolase I in complex with 7-deaza-GTP
分子名称: 7-deaza-GTP, GTP cyclohydrolase 1, ZINC ION
著者Ebenhoch, R, Nar, H.
登録日2020-06-02
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.206 Å)
主引用文献A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
7RI0
DownloadVisualize
BU of 7ri0 by Molmil
Aspergillus fumigatus Enolase Bound to Phosphoenolpyruvate and 2-Phosphoglycerate
分子名称: 2-PHOSPHOGLYCERIC ACID, Enolase, MAGNESIUM ION, ...
著者Nguyen, S, Bruning, J.B.
登録日2021-07-19
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A structural model of the human plasminogen and Aspergillus fumigatus enolase complex.
Proteins, 90, 2022
6HDX
DownloadVisualize
BU of 6hdx by Molmil
Crystal structure of 2-Hydroxyisobutyryl-CoA Ligase (HCL) in the postadenylation state in complex with R3-HIB-AMP
分子名称: (2R)-3-HYDROXY-2-METHYLPROPANOIC ACID, 2-hydroxyisobutyryl-CoA synthetase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2~{R})-2-methyl-3-oxidanyl-propanoate
著者Zahn, M, Rohwerder, T, Strater, N.
登録日2018-08-20
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle.
J.Mol.Biol., 431, 2019
6H77
DownloadVisualize
BU of 6h77 by Molmil
E1 enzyme for ubiquitin like protein activation in complex with UBL
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R.
登録日2018-07-30
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation.
J.Mol.Biol., 431, 2019
8QQ1
DownloadVisualize
BU of 8qq1 by Molmil
SpNOX dehydrogenase domain, mutant F397W in complex with Flavin adenine dinucleotide (FAD)
分子名称: BROMIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Oxidoreductase
著者Humm, A.S, Dupeux, F, Vermot, A, Petit-Harleim, I, Fieschi, F, Marquez, J.A.
登録日2023-10-03
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.941 Å)
主引用文献X-ray structure and enzymatic study of a bacterial NADPH oxidase highlight the activation mechanism of eukaryotic NOX.
Elife, 13, 2024
7RGF
DownloadVisualize
BU of 7rgf by Molmil
Protocadherin gammaC4 EC1-4 crystal structure disrupted trans interface
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Goodman, K.M, Mannepalli, S, Honig, B, Shapiro, L.
登録日2021-07-15
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献How clustered protocadherin binding specificity is tuned for neuronal self-/nonself-recognition.
Elife, 11, 2022
8QYG
DownloadVisualize
BU of 8qyg by Molmil
Crystal structure of Nitroreductase from Bacillus tequilensis
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Rozeboom, H.J, Russo, S, Fraaije, M.W, Poelarends, G.J.
登録日2023-10-26
公開日2024-05-08
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Biochemical, kinetic, and structural characterization of a Bacillus tequilensis nitroreductase.
Febs J., 2024

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon