PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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4K1G	Structure of E. coli Nfo(Endo IV)-H69A mutant bound to a cleaved DNA duplex containing a alphadA:T basepair 分子名称: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*CP*C)-3'), ... 著者 Morera, S, Vigouroux, A. 登録日 2013-04-05 公開日 2013-07-31 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases. Proc.Natl.Acad.Sci.USA, 110, 2013
1CA6	INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA 分子名称: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', CHROMOSOMAL PROTEIN SAC7D 著者 Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J. 登録日 1999-02-23 公開日 2000-02-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs J.Mol.Biol., 303, 2000
4K8Z	KOD Polymerase in binary complex with dsDNA 分子名称: 1,2-ETHANEDIOL, COBALT HEXAMMINE(III), DNA (5'-D(*AP*AP*AP*TP*TP*CP*GP*CP*AP*GP*TP*TP*CP*GP*CP*G)-3'), ... 著者 Bergen, K, Betz, K, Welte, W, Diederichs, K, Marx, A. 登録日 2013-04-19 公開日 2013-06-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structures of KOD and 9N DNA Polymerases Complexed with Primer Template Duplex Chembiochem, 14, 2013
1XO5	Crystal structure of CIB1, an EF-hand, integrin and kinase-binding protein 分子名称: CALCIUM ION, Calcium and integrin-binding protein 1 著者 Gentry, H.R, Singer, A.U, Betts, L, Yang, C, Ferrara, J.D, Parise, L.V, Sondek, J. 登録日 2004-10-05 公開日 2004-12-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Structural and Biochemical Characterization of CIB1 Delineates a New Family of EF-hand-containing Proteins J.Biol.Chem., 280, 2005
1SW6	S. CEREVISIAE SWI6 ANKYRIN-REPEAT FRAGMENT 分子名称: REGULATORY PROTEIN SWI6 著者 Foord, R, Taylor, I.A, Sedgwick, S.G, Smerdon, S.J. 登録日 1998-09-28 公開日 1999-09-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 X-ray structural analysis of the yeast cell cycle regulator Swi6 reveals variations of the ankyrin fold and has implications for Swi6 function. Nat.Struct.Biol., 6, 1999
1M71	Crystal structure of a Monoclonal Fab Specific for Shigella Flexneri Y lipopolysaccharide 分子名称: heavy chain of the monoclonal antibody Fab SYA/J6, light chain of the monoclonal antibody Fab SYA/J6 著者 Vyas, N.K, Vyas, M.N, Chervenak, M.C, Johnson, M.A, Pinto, B.M, Bundle, D.R, Quiocho, F.A. 登録日 2002-07-18 公開日 2003-07-22 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular Recognition of Oligosaccharide Epitopes by a Monoclonal Fab Specific for Shigella flexneri Y Lipopolysaccharide: X-ray Structures and Thermodyanamics Biochemistry, 41, 2002
1GGJ	CRYSTAL STRUCTURE OF CATALASE HPII FROM ESCHERICHIA COLI, ASN201ALA VARIANT. 分子名称: CATALASE HPII, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE 著者 Melik-Adamyan, W.R, Bravo, J, Carpena, X, Switala, J, Mate, M.J, Fita, I, Loewen, P.C. 登録日 2000-08-21 公開日 2000-08-30 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli. Proteins, 44, 2001
4DNB	METHYLATION OF THE ECORI RECOGNITION SITE DOES NOT ALTER DNA CONFORMATION. THE CRYSTAL STRUCTURE OF D(CGCGAM6ATTCGCG) AT 2.0 ANGSTROMS RESOLUTION 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*(6MA)P*TP*TP*CP*GP*CP*G)-3') 著者 Frederick, C.A, Quigley, G.J, Van Der Marel, G.A, Van Boom, J.H, Wang, A.H.-J, Rich, A. 登録日 1988-08-29 公開日 1989-01-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Methylation of the EcoRI recognition site does not alter DNA conformation: the crystal structure of d(CGCGAm6ATTCGCG) at 2.0-A resolution. J.Biol.Chem., 263, 1988
4DO2	Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution. 分子名称: Regulatory protein rop 著者 Amprazi, M, Kapetaniou, E.G, Kokkinidis, M. 登録日 2012-02-09 公開日 2013-02-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.401 Å) 主引用文献 Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. Proc.Natl.Acad.Sci.USA, 111, 2014
1PM7	RmlC (dTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE)STRUCTURE FROM MYCOBACTERIUM TUBERCULOSIS AND INHIBITOR DESIGN. THE APO STRUCTURE. 分子名称: ACETATE ION, GLYCEROL, RFBC 著者 Dong, C, Naismith, J.H, TB Structural Genomics Consortium (TBSGC) 登録日 2003-06-10 公開日 2003-12-09 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Novel inhibitors of an emerging target in Mycobacterium tuberculosis; substituted thiazolidinones as inhibitors of dTDP-rhamnose synthesis. Bioorg.Med.Chem.Lett., 13, 2003
4KML	Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody 分子名称: Major prion protein, Nanobody 著者 Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J. 登録日 2013-05-08 公開日 2014-02-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody. J.Am.Chem.Soc., 136, 2014
1LWH	CRYSTAL STRUCTURE OF T. MARITIMA 4-ALPHA-GLUCANOTRANSFERASE 分子名称: 4-alpha-glucanotransferase, CALCIUM ION 著者 Roujeinikova, A, Raasch, C, Sedelnikova, S, Liebl, W, Rice, D.W. 登録日 2002-05-31 公開日 2002-07-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA 4-ALPHA-GLUCANOTRANSFERASE AND ITS ACARBOSE COMPLEX: IMPLICATIONS FOR SUBSTRATE SPECIFICITY AND CATALYSIS J.Mol.Biol., 321, 2002
3SNV	Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil architecture with symmetric primary structure 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Symfoil-4T/Permutation #1 synthetic protein 著者 Blaber, M, Longo, L, Lee, J. 登録日 2011-06-29 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Folding pathway redundancy in symmetric protein architecture To be Published
4NEH	An internal ligand-bound, metastable state of a leukocyte integrin, aXb2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Sen, M, Yuki, K, Springer, T.A. 登録日 2013-10-29 公開日 2014-01-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.7505 Å) 主引用文献 An internal ligand-bound, metastable state of a leukocyte integrin, alpha X beta 2. J.Cell Biol., 203, 2013
1TAY	DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME 分子名称: HUMAN LYSOZYME 著者 Harata, K, Muraki, M, Jigami, Y. 登録日 1992-08-06 公開日 1993-01-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme. Biochemistry, 31, 1992
1REI	THE MOLECULAR STRUCTURE OF A DIMER COMPOSED OF THE VARIABLE PORTIONS OF THE BENCE-JONES PROTEIN REI REFINED AT 2.0 ANGSTROMS RESOLUTION 分子名称: BENCE-JONES PROTEIN REI (LIGHT CHAIN) 著者 Epp, O, Lattman, E.E, Colman, P, Fehlhammer, H, Bode, W, Schiffer, M, Huber, R, Palm, W. 登録日 1976-03-17 公開日 1976-05-19 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The molecular structure of a dimer composed of the variable portions of the Bence-Jones protein REI refined at 2.0-A resolution. Biochemistry, 14, 1975
1RI3	Structure and mechanism of mRNA cap (guanine N-7) methyltransferase 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, mRNA CAPPING ENZYME 著者 Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D. 登録日 2003-11-16 公開日 2004-02-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase Mol.Cell, 13, 2004
4NH4	Structure of the binary complex of a zingiber officinale double bond reductase in complex with NADP 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Zingiber officinale double bond reductase 著者 Langlois D'Estaintot, B, Buratto, J, Granier, T, Gallois, B, Willis, M.A, Sang, Y, Flores-Sanchez, I.J, Gang, D.R. 登録日 2013-11-04 公開日 2014-11-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of zingiber officinale double bond reductase To be Published
1W6R	Complex of TcAChE with galanthamine derivative 分子名称: (-)-GALANTHAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ... 著者 Greenblatt, H.M, Guillou, C, Guenard, D, Badet, B, Thal, C, Silman, I, Sussman, J.L. 登録日 2004-08-23 公開日 2004-11-25 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design. J.Am.Chem.Soc., 126, 2004
1GL2	Crystal structure of an endosomal SNARE core complex 分子名称: ENDOBREVIN, SYNTAXIN 7, SYNTAXIN 8, ... 著者 Antonin, W, Becker, S, Jahn, R, Schneider, T.R. 登録日 2001-08-22 公開日 2002-01-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of the Endosomal Snare Complex Reveals Common Structural Principles of All Snares. Nat.Struct.Biol., 9, 2001
1MAL	STRUCTURAL BASIS FOR SUGAR TRANSLOCATION THROUGH MALTOPORIN CHANNELS AT 3.1 ANGSTROMS RESOLUTION 分子名称: MALTOPORIN 著者 Schirmer, T. 登録日 1994-11-24 公開日 1995-12-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for sugar translocation through maltoporin channels at 3.1 A resolution. Science, 267, 1995
1W75	Native Orthorhombic form of Torpedo californica acetylcholinesterase (AChE) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE 著者 Greenblatt, H.M, Botti, S, Argaman, A, Silman, I, Sussman, J.L. 登録日 2004-08-29 公開日 2004-11-25 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design. J.Am.Chem.Soc., 126, 2004
4HW3	Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design 分子名称: 3-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1-benzothiophene-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1 著者 Zhao, B. 登録日 2012-11-07 公開日 2013-01-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. J.Med.Chem., 56, 2013
1R9Q	structure analysis of ProX in complex with proline betaine 分子名称: 1,1-DIMETHYL-PROLINIUM, Glycine betaine-binding periplasmic protein, UNKNOWN ATOM OR ION 著者 Schiefner, A, Breed, J, Bosser, L, Kneip, S, Gade, J, Holtmann, G, Diederichs, K, Welte, W, Bremer, E. 登録日 2003-10-30 公開日 2004-02-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Cation-pi Interactions as Determinants for Binding of the Compatible Solutes Glycine Betaine and Proline Betaine by the Periplasmic Ligand-binding Protein ProX from Escherichia coli J.BIOL.CHEM., 279, 2004
4HW4	Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design 分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1, Mcl-1 BH3 peptide 著者 Friberg, A, Zhao, B. 登録日 2012-11-07 公開日 2013-01-09 最終更新日 2013-03-06 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. J.Med.Chem., 56, 2013

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