Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7M40
DownloadVisualize
BU of 7m40 by Molmil
Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)
分子名称: Histone-binding protein RBBP4, N~3~-{4-[3-(dimethylamino)pyrrolidin-1-yl]-6,7-dimethoxyquinazolin-2-yl}-N~1~,N~1~-dimethylpropane-1,3-diamine
著者Perveen, S, Dong, A, Tempel, W, Zepeda-Velazquez, C, Abbey, M, McLeod, D, Marcellus, R, Mohammed, M, Ensan, D, Panagopoulos, D, Trush, V, Gibson, E, Brown, P.J, Arrowsmith, C.H, Schapira, M, Al-awar, R, Vedadi, M, Structural Genomics Consortium (SGC)
登録日2021-03-19
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)
To Be Published
1XVF
DownloadVisualize
BU of 1xvf by Molmil
soluble methane monooxygenase hydroxylase: chloropropanol soaked structure
分子名称: 3-CHLOROPROPANOL, FE (III) ION, Methane monooxygenase component A alpha chain, ...
著者Sazinsky, M.H, Lippard, S.J.
登録日2004-10-27
公開日2005-05-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Product Bound Structures of the Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath): Protein Motion in the Alpha-Subunit
J.Am.Chem.Soc., 127, 2005
4OW4
DownloadVisualize
BU of 4ow4 by Molmil
Beta-trefoil designed by folding nucleus symmetric expansion ("Phifoil")
分子名称: Beta-terfoil designed by folding nucleus symmetric expansion ("Phifoil"), SULFATE ION
著者Blaber, M, Longo, L.M.
登録日2014-01-31
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Evolution and design of protein structure by folding nucleus symmetric expansion.
Structure, 22, 2014
5YWO
DownloadVisualize
BU of 5ywo by Molmil
Structure of JEV-2F2 Fab complex
分子名称: 2F2 heavy chain, 2F2 light chain, JEV E protein, ...
著者Qiu, X, Lei, Y.F, Yang, P, Gao, Q, Wang, N, Cao, L, Yuan, S, Wang, X, Xu, Z.K, Rao, Z.
登録日2017-11-29
公開日2018-03-21
最終更新日2018-09-12
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
3FBL
DownloadVisualize
BU of 3fbl by Molmil
Crystal structure of ORF132 of the archaeal virus Acidianus Filamentous Virus 1 (AFV1)
分子名称: CHLORIDE ION, Putative uncharacterized protein
著者Goulet, A, Leulliot, N, Prangishvili, D, van Tilbeurgh, H, Campanacci, V, Cambillau, C.
登録日2008-11-19
公開日2009-11-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage
Proc.Natl.Acad.Sci.USA, 106, 2009
5ZX1
DownloadVisualize
BU of 5zx1 by Molmil
Crystal structure of ENT domain from T. brucei
分子名称: ENT
著者Shanhui, L, Xiaoming, T, Juan, M.
登録日2018-05-17
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structure of an ENT domain from Trypanosoma brucei.
Biochem.Biophys.Res.Commun., 505, 2018
3FBZ
DownloadVisualize
BU of 3fbz by Molmil
Crystal structure of ORF140 of the archaeal virus Acidianus Filamentous Virus 1 (AFV1)
分子名称: CHLORIDE ION, Putative uncharacterized protein, octyl beta-D-glucopyranoside
著者Goulet, A, Prangishvili, D, van Tilbeurgh, H, Campanacci, V, Cambillau, C.
登録日2008-11-20
公開日2009-11-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage.
Proc.Natl.Acad.Sci.USA, 106, 2009
7FR6
DownloadVisualize
BU of 7fr6 by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z2890147894
分子名称: (azepan-1-yl)(2-hydroxy-3H-imidazo[4,5-b]pyridin-7-yl)methanone, Non-structural protein 3
著者Correy, G.J, Fraser, J.S.
登録日2022-10-20
公開日2022-11-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Ligand screen against SARS-CoV-2 NSP3 macrodomain
To be published
7FSR
DownloadVisualize
BU of 7fsr by Molmil
SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z54615640
分子名称: 1,2-ETHANEDIOL, ALANINE, D-GLUTAMIC ACID, ...
著者Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
登録日2023-01-24
公開日2023-02-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献SDCBP PanDDA analysis group deposition
To Be Published
8OVB
DownloadVisualize
BU of 8ovb by Molmil
Human Complement C3b in complex with Trypanosoma brucei ISG65.
分子名称: Complement C3, Complement C3f fragment, ISG65 G
著者Cook, A.D, Higgins, M.K.
登録日2023-04-25
公開日2024-02-14
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular mechanism of complement inhibition by the trypanosome receptor ISG65.
Elife, 12, 2024
5YWP
DownloadVisualize
BU of 5ywp by Molmil
JEV-2H4 Fab complex
分子名称: 2H4 heavy chain, 2H4 light chain, JEV E protein, ...
著者Qiu, X.D, Lei, Y.F, Yang, P, Gao, Q, WANG, N, Cao, L, Yuan, S, Wang, X.X, Xu, Z.K, Rao, Z.H.
登録日2017-11-29
公開日2018-05-02
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
6EST
DownloadVisualize
BU of 6est by Molmil
INTERACTION OF THE PEPTIDE CF3-LEU-ALA-NH-C6H4-CF3(TFLA) WITH PORCINE PANCREATIC ELASTASE. X-RAY STUDIES AT 1.8 ANGSTROMS
分子名称: CALCIUM ION, DIMETHYLFORMAMIDE, PORCINE PANCREATIC ELASTASE, ...
著者Prange, T, Li De Lasierra, I.
登録日1990-06-15
公開日1991-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Interaction of the peptide CF3-Leu-Ala-NH-C6H4-CF3 (TFLA) with porcine pancreatic elastase. X-ray studies at 1.8 A.
J.Mol.Recog., 3, 1990
7UAY
DownloadVisualize
BU of 7uay by Molmil
Crystal structure of human CYP3A4 with the caged inhibitor
分子名称: (N-[([2,2'-bipyridin]-5-yl-kappa~2~N~1~,N~1'~)methyl]-3-{[(pyridin-3-yl)methyl]sulfanyl}propanamide)bis[2-(quinolin-2-yl-kappaN)phenyl-kappaC~1~]iridium, Cytochrome P450 3A4, PROTOPORPHYRIN IX CONTAINING FE
著者Sevrioukova, I.F.
登録日2022-03-14
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Ir(III)-Based Agents for Monitoring the Cytochrome P450 3A4 Active Site Occupancy.
Inorg.Chem., 61, 2022
7UAZ
DownloadVisualize
BU of 7uaz by Molmil
Crystal structure of human CYP3A4 with the caged inhibitor
分子名称: (N-[([2,2'-bipyridin]-5-yl-kappa~2~N~1~,N~1'~)methyl]-3-{[(pyridin-3-yl)methyl]sulfanyl}propanamide)bis[2-(pyridin-2-yl-kappaN)phenyl-kappaC~1~]iridium, Cytochrome P450 3A4, PROTOPORPHYRIN IX CONTAINING FE
著者Sevrioukova, I.F.
登録日2022-03-14
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Ir(III)-Based Agents for Monitoring the Cytochrome P450 3A4 Active Site Occupancy.
Inorg.Chem., 61, 2022
3FBW
DownloadVisualize
BU of 3fbw by Molmil
Structure of Rhodococcus rhodochrous haloalkane dehalogenase DhaA mutant C176Y
分子名称: BENZOIC ACID, CHLORIDE ION, Haloalkane dehalogenase, ...
著者Dohnalek, J, Stsiapanava, A, Gavira, J.A, Kuta Smatanova, I, Kuty, M.
登録日2008-11-20
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels.
Acta Crystallogr.,Sect.D, 66, 2010
9CP9
DownloadVisualize
BU of 9cp9 by Molmil
Crystal structure of DHPS-3-dehydrogenase, HpsN H319A variant from Cupriavidus pinatubonensis in complex with substrate (R-DHPS) and NADH
分子名称: (2R)-2,3-dihydroxypropane-1-sulfonic acid, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, SULFATE ION, ...
著者Lee, M.
登録日2024-07-18
公開日2024-09-25
実験手法X-RAY DIFFRACTION (2.013 Å)
主引用文献Structural and kinetic insights into the stereospecific oxidation of R -2,3-dihydroxypropanesulfonate by DHPS-3-dehydrogenase from Cupriavidus pinatubonensis.
Chem Sci, 2024
1QR0
DownloadVisualize
BU of 1qr0 by Molmil
CRYSTAL STRUCTURE OF THE 4'-PHOSPHOPANTETHEINYL TRANSFERASE SFP-COENZYME A COMPLEX
分子名称: 4'-PHOSPHOPANTETHEINYL TRANSFERASE SFP, COENZYME A, MAGNESIUM ION
著者Reuter, K, Mofid, R.M, Marahiel, A.M, Ficner, R.
登録日1999-06-17
公開日1999-12-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the surfactin synthetase-activating enzyme sfp: a prototype of the 4'-phosphopantetheinyl transferase superfamily.
EMBO J., 18, 1999
1B2P
DownloadVisualize
BU of 1b2p by Molmil
NATIVE MANNOSE-SPECIFIC BULB LECTIN FROM SCILLA CAMPANULATA (BLUEBELL) AT 1.7 ANGSTROMS RESOLUTION
分子名称: PROTEIN (LECTIN)
著者Wood, S.D, Wright, L.M, Reynolds, C.D, Rizkallah, P.J, Allen, A.K, Peumans, W.J, Van Damme, E.J.M.
登録日1998-11-30
公開日1999-07-22
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the native (unligated) mannose-specific bulb lectin from Scilla campanulata (bluebell) at 1.7 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
7DC6
DownloadVisualize
BU of 7dc6 by Molmil
Giant panda MHC class I complexes
分子名称: Beta-2-microglobulin, CCV-NGY9 peptide from Spike protein, MHC class I antigen
著者Yuan, H, Xia, C.
登録日2020-10-23
公開日2021-06-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Crystal structure of the giant panda MHC class I complex: First insights into the viral peptide presentation profile in the bear family.
Protein Sci., 29, 2020
1OU6
DownloadVisualize
BU of 1ou6 by Molmil
Biosynthetic thiolase from Zoogloea ramigera in complex with acetyl-O-pantetheine-11-pivalate
分子名称: Acetyl-CoA acetyltransferase, PANTOTHENYL-AMINOETHANOL-ACETATE PIVALIC ACID, SULFATE ION
著者Kursula, P, Schmitz, W, Wierenga, R.K.
登録日2003-03-24
公開日2004-06-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The surprising binding mode of a coenzyme A analogue, O-pantetheine-11-pivalate, in the catalytic cavity of bacterial biosynthetic thiolase
To be Published
1K6E
DownloadVisualize
BU of 1k6e by Molmil
COMPLEX OF HYDROLYTIC HALOALKANE DEHALOGENASE LINB FROM SPHINGOMONAS PAUCIMOBILIS UT26 WITH 1,2-PROPANEDIOL (PRODUCT OF DEHALOGENATION OF 1,2-DIBROMOPROPANE) AT 1.85A
分子名称: 1-BROMOPROPANE-2-OL, BROMIDE ION, CHLORIDE ION, ...
著者Streltsov, V.A, Prokop, Z, Damborsky, J, Nagata, Y, Oakley, A, Wilce, M.C.J.
登録日2001-10-16
公開日2003-08-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates.
Biochemistry, 42, 2003
7UE8
DownloadVisualize
BU of 7ue8 by Molmil
PANK3 complex structure with compound PZ-3890
分子名称: 1,2-ETHANEDIOL, 1-[4-(6-chloropyridazin-3-yl)piperazin-1-yl]-2-(4-cyclopropyl-3-fluorophenyl)ethan-1-one, ACETATE ION, ...
著者White, S.W, Yun, M, Lee, R.E.
登録日2022-03-21
公開日2023-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Relief of CoA sequestration and restoration of mitochondrial function in a mouse model of propionic acidemia.
J Inherit Metab Dis, 46, 2023
5NVY
DownloadVisualize
BU of 5nvy by Molmil
pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-acetamidopropanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl) pyrrolidine-2-carboxamide (ligand 11)
分子名称: (2~{S},4~{R})-1-[(2~{S})-2-acetamidopropanoyl]-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Soares, P, Gadd, M.S, Ciulli, A.
登録日2017-05-04
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Group-Based Optimization of Potent and Cell-Active Inhibitors of the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase: Structure-Activity Relationships Leading to the Chemical Probe (2S,4R)-1-((S)-2-(1-Cyanocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (VH298).
J. Med. Chem., 61, 2018
1DLP
DownloadVisualize
BU of 1dlp by Molmil
STRUCTURAL CHARACTERIZATION OF THE NATIVE FETUIN-BINDING PROTEIN SCILLA CAMPANULATA AGGLUTININ (SCAFET): A NOVEL TWO-DOMAIN LECTIN
分子名称: LECTIN SCAFET PRECURSOR
著者Wright, L.M, Reynolds, C.D, Rizkallah, P.J, Allen, A.K, VanDamme, E.J.M, Donovan, M.J, Peumans, W.J.
登録日1999-12-11
公開日2000-02-10
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural characterisation of the native fetuin-binding protein Scilla campanulata agglutinin: a novel two-domain lectin.
FEBS Lett., 468, 2000
9CP8
DownloadVisualize
BU of 9cp8 by Molmil
Crystal structure of DHPS-3-dehydrogenase, HpsN from Cupriavidus pinatubonensis in complex with product (R-sulfolactate) and NADH
分子名称: (2R)-3-SULFOLACTIC ACID, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Sulfopropanediol 3-dehydrogenase, ...
著者Lee, M.
登録日2024-07-18
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural and kinetic insights into the stereospecific oxidation of R -2,3-dihydroxypropanesulfonate by DHPS-3-dehydrogenase from Cupriavidus pinatubonensis.
Chem Sci, 2024

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon