PDB: 7386 件ウェブページステータス検索Chemie searchBIRD

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5DJE	Crystal structure of the zuotin homology domain (ZHD) from yeast Zuo1 分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ... 著者 Shrestha, O.K, Bingman, C.A, Craig, E.A. 登録日 2015-09-02 公開日 2016-09-28 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Dual interaction of the Hsp70 J-protein cochaperone Zuotin with the 40S and 60S ribosomal subunits. Nat.Struct.Mol.Biol., 23, 2016
7OE1	30S ribosomal subunit from E. coli 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Maksimova, E, Korepanov, A, Baymukhametov, T, Kravchenko, O, Stolboushkina, E. 登録日 2021-04-30 公開日 2021-07-14 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 RbfA Is Involved in Two Important Stages of 30S Subunit Assembly: Formation of the Central Pseudoknot and Docking of Helix 44 to the Decoding Center. Int J Mol Sci, 22, 2021
2JQ7	Model for thiostrepton binding to the ribosomal L11-RNA 分子名称: 50S RIBOSOMAL PROTEIN L11, RIBOSOMAL RNA, THIOSTREPTON 著者 Jonker, H.R.A, Ilin, S, Grimm, S.K, Woehnert, J, Schwalbe, H. 登録日 2007-05-30 公開日 2007-07-03 最終更新日 2021-08-18 実験手法 SOLUTION NMR 主引用文献 L11 Domain Rearrangement Upon Binding to RNA and Thiostrepton Studied by NMR Spectroscopy Nucleic Acids Res., 35, 2007
7OE0	E. coli pre-30S delta rbfA ribosomal subunit class F 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Maksimova, E, Korepanov, A, Baymukhametov, T, Kravchenko, O, Stolboushkina, E. 登録日 2021-04-30 公開日 2021-07-14 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 RbfA Is Involved in Two Important Stages of 30S Subunit Assembly: Formation of the Central Pseudoknot and Docking of Helix 44 to the Decoding Center. Int J Mol Sci, 22, 2021
7X34	Cryo-EM structure of RNC-RAC complex in presence of Ssb from S. cerevisiae 2 分子名称: RNA (130-mer), Zuotin 著者 Chen, Y, Gao, N. 登録日 2022-02-27 公開日 2022-06-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural remodeling of ribosome associated Hsp40-Hsp70 chaperones during co-translational folding. Nat Commun, 13, 2022
1CQN	PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION. 分子名称: RIBOSOMAL PROTEIN S6 著者 Kristensen, O, Otzen, D.E, Oliveberg, M. 登録日 1999-08-08 公開日 2000-09-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly. Proc.Natl.Acad.Sci.USA, 97, 2000
1CQM	PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION. 分子名称: RIBOSOMAL PROTEIN S6 著者 Kristensen, O, Otzen, D.E, Oliveberg, M. 登録日 1999-08-08 公開日 2000-09-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly. Proc.Natl.Acad.Sci.USA, 97, 2000
5IC7	Structure of the WD domain of UTP18 分子名称: Putative uncharacterized protein, SULFATE ION 著者 Zhang, C, Ye, K. 登録日 2016-02-22 公開日 2016-07-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.331 Å) 主引用文献 Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits Nucleic Acids Res., 44, 2016
1ZN1	Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex 分子名称: 30S ribosomal protein S12, Ribosome recycling factor, ribosomal 16S RNA, ... 著者 Gao, N, Zavialov, A.V, Li, W, Sengupta, J, Valle, M, Gursky, R.P, Ehrenberg, M, Frank, J. 登録日 2005-05-11 公開日 2005-06-14 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (14.1 Å) 主引用文献 Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies. Mol.Cell, 18, 2005
5LW7	S. solfataricus ABCE1 post-splitting state 分子名称: ABC transporter ATP-binding protein, IRON/SULFUR CLUSTER 著者 Heuer, A, Gerovac, M, Beckmann, R, Tampe, R. 登録日 2016-09-15 公開日 2016-11-16 最終更新日 2019-02-20 実験手法 ELECTRON MICROSCOPY (17 Å) 主引用文献 Structure of the ribosome post-recycling complex probed by chemical cross-linking and mass spectrometry. Nat Commun, 7, 2016
1ZN0	Coordinates of RRF and EF-G fitted into Cryo-EM map of the 50S subunit bound with both EF-G (GDPNP) and RRF 分子名称: 16S RIBOSOMAL RNA, ELONGATION FACTOR G, Ribosome recycling factor 著者 Gao, N, Zavialov, A.V, Li, W, Sengupta, J, Valle, M, Gursky, R.P, Ehrenberg, M, Frank, J. 登録日 2005-05-11 公開日 2005-06-14 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (15.5 Å) 主引用文献 Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies. Mol.Cell, 18, 2005
7OI0	E.coli delta rbfA pre-30S ribosomal subunit class D 分子名称: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Maksimova, E, Korepanov, A, Baymukhametov, T, Kravchenko, O, Stolboushkina, E. 登録日 2021-05-11 公開日 2021-07-14 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 RbfA Is Involved in Two Important Stages of 30S Subunit Assembly: Formation of the Central Pseudoknot and Docking of Helix 44 to the Decoding Center. Int J Mol Sci, 22, 2021
5IC9	Structure of the CTD complex of Utp12 and Utp13 分子名称: Putative uncharacterized protein 著者 Zhang, C, Ye, K. 登録日 2016-02-23 公開日 2016-07-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits Nucleic Acids Res., 44, 2016
1WTS	HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: RNA (5'-R(*GP*GP*AP*CP*CP*2MGP*GP*MA6P*MA6P*GP*GP*UP*CP*C)-3') 著者 Rife, J.P, Moore, P.B. 登録日 1998-06-26 公開日 1999-01-27 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The structure of a methylated tetraloop in 16S ribosomal RNA. Structure, 6, 1998
1WTT	HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, 11 STRUCTURES 分子名称: RNA (5'-R(*GP*GP*AP*CP*CP*2MGP*GP*MA6P*MA6P*GP*GP*UP*CP*C)-3') 著者 Rife, J.P, Moore, P.B. 登録日 1998-06-26 公開日 1999-01-27 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The structure of a methylated tetraloop in 16S ribosomal RNA. Structure, 6, 1998
3ZZP	Circular permutant of ribosomal protein S6, lacking edge strand beta- 2 of wild-type S6. 分子名称: RIBOSOMAL PROTEIN S6 著者 Saraboji, K, Haglund, E, Lindberg, M.O, Oliveberg, M, Logan, D.T. 登録日 2011-09-02 公開日 2011-11-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (0.96 Å) 主引用文献 Trimming Down a Protein Structure to its Bare Foldons: Spatial Organization of the Cooperative Unit. J.Biol.Chem., 287, 2012
6IB7	Structure of wild type SuhB 分子名称: GLYCEROL, Inositol-1-monophosphatase, MAGNESIUM ION 著者 Huang, Y.H, Loll, B, Wahl, M.C. 登録日 2018-11-29 公開日 2019-04-17 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.245 Å) 主引用文献 Structural basis for the function of SuhB as a transcription factor in ribosomal RNA synthesis. Nucleic Acids Res., 47, 2019
6IB8	Structure of a complex of SuhB and NusA AR2 domain 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, Inositol-1-monophosphatase, ... 著者 Huang, Y.H, Loll, B, Wahl, M.C. 登録日 2018-11-29 公開日 2019-04-17 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.646 Å) 主引用文献 Structural basis for the function of SuhB as a transcription factor in ribosomal RNA synthesis. Nucleic Acids Res., 47, 2019
5IC8	Structure of UTP6 分子名称: Putative uncharacterized protein 著者 Zhang, C, Ye, K. 登録日 2016-02-23 公開日 2016-07-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits Nucleic Acids Res., 44, 2016
6MD3	Structure of T. brucei RRP44 PIN domain 分子名称: CHLORIDE ION, MANGANESE (II) ION, Rrp44p homologue, ... 著者 Guimaraes, B.G, Cesaro, G. 登録日 2018-09-03 公開日 2019-01-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Trypanosoma brucei RRP44 is involved in an early stage of large ribosomal subunit RNA maturation. RNA Biol, 16, 2019
2QR8	2.0A X-ray structure of C-terminal kinase domain of p90 ribosomal S6 kinase 2 (RSK2) 分子名称: Ribosomal protein S6 kinase alpha-3, SODIUM ION 著者 Tereshko, V, Malakhova, M, Dong, Z. 登録日 2007-07-27 公開日 2007-12-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for activation of the autoinhibitory C-terminal kinase domain of p90 RSK2. Nat.Struct.Mol.Biol., 15, 2008
2QR7	2.0A X-ray structure of C-terminal kinase domain of p90 ribosomal S6 kinase 2: Se-Met derivative 分子名称: Ribosomal protein S6 kinase alpha-3, SODIUM ION 著者 Malakhova, M, Tereshko, V, Dong, Z. 登録日 2007-07-27 公開日 2007-12-11 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for activation of the autoinhibitory C-terminal kinase domain of p90 RSK2. Nat.Struct.Mol.Biol., 15, 2008
7KHE	Escherichia coli RNA polymerase and rrnBP1 promoter pre-open complex with DksA/ppGpp 分子名称: CHAPSO, DNA (46-MER), DNA (54-MER), ... 著者 Shin, Y, Qayyum, M.Z, Murakami, K.S. 登録日 2020-10-21 公開日 2020-12-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Structural basis of ribosomal RNA transcription regulation. Nat Commun, 12, 2021
7KHB	Escherichia coli RNA polymerase and rrnBP1 promoter open complex 分子名称: CHAPSO, DNA (60-MER), DNA (64-MER), ... 著者 Shin, Y, Qayyum, M.Z, Murakami, K.S. 登録日 2020-10-20 公開日 2020-10-28 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.53 Å) 主引用文献 Structural basis of ribosomal RNA transcription regulation. Nat Commun, 12, 2021
7KHC	Escherichia coli RNA polymerase and rrnBP1 promoter closed complex 分子名称: CHAPSO, DNA (18 MER), DNA (63-MER), ... 著者 Shin, Y, Qayyum, M.Z, Murakami, K.S. 登録日 2020-10-20 公開日 2020-10-28 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.14 Å) 主引用文献 Structural basis of ribosomal RNA transcription regulation. Nat Commun, 12, 2021

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